PDB Chemical Component 3AR
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 3AR
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CA |
1.465 |
1.469 |
| N |
H |
1.000 |
1.009 |
| N |
H2 |
1.000 |
1.010 |
| CA |
C |
1.524 |
1.508 |
| CA |
CB |
1.554 |
1.530 |
| CA |
HA |
1.100 |
1.090 |
| C |
O |
1.235 |
1.208 |
| C |
OXT |
1.242 |
1.342 |
| CB |
CG |
1.556 |
1.531 |
| CB |
HB2 |
1.100 |
1.090 |
| CB |
HB3 |
1.100 |
1.090 |
| CG |
CD |
1.539 |
1.530 |
| CG |
HG2 |
1.100 |
1.091 |
| CG |
HG3 |
1.100 |
1.090 |
| CD |
NE |
1.496 |
1.465 |
| CD |
HD2 |
1.100 |
1.090 |
| CD |
HD3 |
1.100 |
1.090 |
| NE |
CZ |
1.334 |
1.375 |
| NE |
HE |
1.000 |
0.970 |
| CZ |
NH1 |
1.323 |
1.375 |
| CZ |
NH2 |
1.304 |
1.303 |
| NH1 |
C1 |
1.482 |
1.464 |
| NH1 |
HH1 |
1.000 |
0.970 |
| NH2 |
HH21 |
1.000 |
0.970 |
| NH2 |
HH22 |
1.000 |
0.970 |
| C1 |
C2 |
1.547 |
1.530 |
| C1 |
H11 |
1.100 |
1.090 |
| C1 |
H12 |
1.100 |
1.090 |
| C2 |
C3 |
1.536 |
1.530 |
| C2 |
H21 |
1.100 |
1.091 |
| C2 |
H22 |
1.100 |
1.089 |
| C3 |
H31 |
1.100 |
1.090 |
| C3 |
H32 |
1.100 |
1.090 |
| C3 |
H33 |
1.100 |
1.090 |
| OXT |
HXT |
0.950 |
0.966 |
Bond Angles for 3AR
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
N |
H |
109.5 |
106.7 |
| CA |
N |
H2 |
109.5 |
106.7 |
| N |
CA |
C |
110.7 |
109.5 |
| N |
CA |
CB |
108.8 |
109.5 |
| N |
CA |
HA |
109.6 |
109.5 |
| H |
N |
H2 |
109.5 |
106.7 |
| C |
CA |
CB |
111.0 |
109.5 |
| C |
CA |
HA |
107.4 |
109.4 |
| CA |
C |
O |
121.9 |
120.0 |
| CA |
C |
OXT |
116.3 |
120.0 |
| CB |
CA |
HA |
109.3 |
109.5 |
| CA |
CB |
CG |
115.3 |
109.5 |
| CA |
CB |
HB2 |
106.2 |
109.5 |
| CA |
CB |
HB3 |
107.6 |
109.5 |
| O |
C |
OXT |
121.9 |
120.0 |
| C |
OXT |
HXT |
109.5 |
120.0 |
| CG |
CB |
HB2 |
106.2 |
109.4 |
| CG |
CB |
HB3 |
107.5 |
109.4 |
| CB |
CG |
CD |
114.0 |
109.5 |
| CB |
CG |
HG2 |
107.0 |
109.4 |
| CB |
CG |
HG3 |
108.0 |
109.4 |
| HB2 |
CB |
HB3 |
114.2 |
109.5 |
| CD |
CG |
HG2 |
107.0 |
109.5 |
| CD |
CG |
HG3 |
108.0 |
109.5 |
| CG |
CD |
NE |
110.3 |
109.4 |
| CG |
CD |
HD2 |
109.0 |
109.5 |
| CG |
CD |
HD3 |
109.2 |
109.5 |
| HG2 |
CG |
HG3 |
113.0 |
109.4 |
| NE |
CD |
HD2 |
109.0 |
109.5 |
| NE |
CD |
HD3 |
109.2 |
109.5 |
| CD |
NE |
CZ |
125.8 |
120.0 |
| CD |
NE |
HE |
117.1 |
120.0 |
| HD2 |
CD |
HD3 |
110.1 |
109.5 |
| CZ |
NE |
HE |
117.1 |
120.0 |
| NE |
CZ |
NH1 |
124.0 |
120.0 |
| NE |
CZ |
NH2 |
116.6 |
120.0 |
| NH1 |
CZ |
NH2 |
119.5 |
120.0 |
| CZ |
NH1 |
C1 |
119.1 |
120.0 |
| CZ |
NH1 |
HH1 |
120.4 |
120.0 |
| CZ |
NH2 |
HH21 |
124.2 |
120.0 |
| CZ |
NH2 |
HH22 |
111.5 |
120.0 |
| C1 |
NH1 |
HH1 |
120.5 |
120.0 |
| NH1 |
C1 |
C2 |
109.6 |
109.5 |
| NH1 |
C1 |
H11 |
109.4 |
109.5 |
| NH1 |
C1 |
H12 |
109.4 |
109.5 |
| HH21 |
NH2 |
HH22 |
124.2 |
120.0 |
| C2 |
C1 |
H11 |
109.4 |
109.5 |
| C2 |
C1 |
H12 |
109.4 |
109.4 |
| C1 |
C2 |
C3 |
110.1 |
109.5 |
| C1 |
C2 |
H21 |
109.1 |
109.5 |
| C1 |
C2 |
H22 |
109.3 |
109.5 |
| H11 |
C1 |
H12 |
109.6 |
109.5 |
| C3 |
C2 |
H21 |
109.2 |
109.4 |
| C3 |
C2 |
H22 |
109.3 |
109.5 |
| C2 |
C3 |
H31 |
109.5 |
109.5 |
| C2 |
C3 |
H32 |
109.5 |
109.5 |
| C2 |
C3 |
H33 |
109.5 |
109.5 |
| H21 |
C2 |
H22 |
110.0 |
109.4 |
| H31 |
C3 |
H32 |
109.5 |
109.4 |
| H31 |
C3 |
H33 |
109.5 |
109.4 |
| H32 |
C3 |
H33 |
109.4 |
109.5 |
Torsion Angles for 3AR
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H |
N |
CA |
H2 |
120.0 |
246.2 |
| C |
CA |
N |
CB |
122.3 |
120.0 |
| C |
CA |
N |
HA |
241.8 |
240.0 |
| N |
CA |
C |
O |
350.9 |
340.0 |
| N |
CA |
C |
OXT |
171.4 |
160.0 |
| CB |
CA |
N |
HA |
119.5 |
120.1 |
| N |
CA |
CB |
CG |
287.9 |
295.0 |
| N |
CA |
CB |
HB2 |
170.6 |
175.0 |
| N |
CA |
CB |
HB3 |
47.9 |
54.9 |
| CA |
N |
H |
H2 |
240.0 |
113.8 |
| H |
N |
CA |
C |
214.2 |
60.0 |
| H |
N |
CA |
CB |
91.9 |
300.0 |
| H |
N |
CA |
HA |
332.4 |
180.0 |
| CA |
N |
H2 |
H |
120.0 |
246.2 |
| H2 |
N |
CA |
C |
94.1 |
173.8 |
| H2 |
N |
CA |
CB |
331.9 |
53.8 |
| H2 |
N |
CA |
HA |
212.4 |
293.8 |
| C |
CA |
N |
H |
214.2 |
60.0 |
| C |
CA |
N |
H2 |
94.1 |
173.8 |
| N |
CA |
C |
CB |
239.0 |
240.0 |
| N |
CA |
C |
HA |
119.6 |
120.0 |
| CB |
CA |
C |
HA |
240.6 |
240.0 |
| C |
CA |
CB |
CG |
165.8 |
175.0 |
| C |
CA |
CB |
HB2 |
48.4 |
55.0 |
| C |
CA |
CB |
HB3 |
285.8 |
295.0 |
| O |
C |
CA |
OXT |
179.5 |
180.1 |
| CA |
C |
OXT |
HXT |
179.5 |
180.0 |
| CB |
CA |
N |
H |
91.9 |
300.0 |
| CB |
CA |
N |
H2 |
331.9 |
53.8 |
| N |
CA |
CB |
C |
122.1 |
120.0 |
| N |
CA |
CB |
HA |
240.3 |
239.9 |
| C |
CA |
CB |
HA |
118.2 |
120.0 |
| CB |
CA |
C |
O |
111.9 |
100.0 |
| CB |
CA |
C |
OXT |
292.4 |
280.0 |
| CG |
CB |
CA |
HB2 |
117.4 |
120.0 |
| CG |
CB |
CA |
HB3 |
240.0 |
240.0 |
| CA |
CB |
CG |
CD |
102.3 |
180.0 |
| CA |
CB |
CG |
HG2 |
344.3 |
60.0 |
| CA |
CB |
CG |
HG3 |
222.3 |
300.1 |
| HB2 |
CB |
CA |
HB3 |
122.6 |
120.1 |
| HA |
CA |
N |
H |
332.4 |
180.0 |
| HA |
CA |
N |
H2 |
212.4 |
293.8 |
| N |
CA |
HA |
C |
239.7 |
240.0 |
| N |
CA |
HA |
CB |
119.2 |
120.0 |
| C |
CA |
HA |
CB |
239.5 |
240.0 |
| HA |
CA |
C |
O |
231.3 |
220.0 |
| HA |
CA |
C |
OXT |
51.8 |
40.0 |
| HA |
CA |
CB |
CG |
47.6 |
55.0 |
| HA |
CA |
CB |
HB2 |
290.2 |
295.1 |
| HA |
CA |
CB |
HB3 |
167.6 |
175.0 |
| O |
C |
CA |
CB |
111.9 |
100.0 |
| O |
C |
CA |
HA |
231.3 |
220.0 |
| CA |
C |
O |
OXT |
180.5 |
179.9 |
| O |
C |
OXT |
HXT |
360.0 |
359.9 |
| OXT |
C |
CA |
CB |
292.4 |
280.0 |
| OXT |
C |
CA |
HA |
51.8 |
40.0 |
| CA |
C |
OXT |
O |
179.5 |
180.1 |
| CG |
CB |
CA |
HA |
47.6 |
55.0 |
| CA |
CB |
CG |
HB2 |
242.6 |
240.0 |
| CA |
CB |
CG |
HB3 |
120.0 |
120.0 |
| HB2 |
CB |
CG |
HB3 |
237.4 |
240.0 |
| CD |
CG |
CB |
HG2 |
118.0 |
120.0 |
| CD |
CG |
CB |
HG3 |
240.0 |
239.9 |
| CB |
CG |
CD |
NE |
34.2 |
180.0 |
| CB |
CG |
CD |
HD2 |
274.5 |
60.0 |
| CB |
CG |
CD |
HD3 |
154.2 |
300.0 |
| HG2 |
CG |
CB |
HG3 |
122.0 |
119.9 |
| HB2 |
CB |
CA |
HA |
290.2 |
295.1 |
| CA |
CB |
HB2 |
CG |
123.3 |
120.0 |
| CA |
CB |
HB2 |
HB3 |
241.6 |
239.9 |
| CG |
CB |
HB2 |
HB3 |
118.3 |
119.9 |
| HB2 |
CB |
CG |
CD |
219.7 |
300.0 |
| HB2 |
CB |
CG |
HG2 |
101.7 |
180.0 |
| HB2 |
CB |
CG |
HG3 |
339.7 |
60.1 |
| HB3 |
CB |
CA |
HA |
167.6 |
175.0 |
| CA |
CB |
HB3 |
CG |
235.2 |
240.0 |
| CA |
CB |
HB3 |
HB2 |
117.6 |
120.1 |
| CG |
CB |
HB3 |
HB2 |
242.4 |
240.1 |
| HB3 |
CB |
CG |
CD |
342.3 |
60.0 |
| HB3 |
CB |
CG |
HG2 |
224.3 |
299.9 |
| HB3 |
CB |
CG |
HG3 |
102.3 |
180.0 |
| CD |
CG |
CB |
HB2 |
219.7 |
300.0 |
| CD |
CG |
CB |
HB3 |
342.3 |
60.0 |
| CB |
CG |
CD |
HG2 |
242.0 |
240.0 |
| CB |
CG |
CD |
HG3 |
120.0 |
120.0 |
| HG2 |
CG |
CD |
HG3 |
238.1 |
240.0 |
| NE |
CD |
CG |
HD2 |
119.7 |
120.0 |
| NE |
CD |
CG |
HD3 |
240.0 |
240.0 |
| CG |
CD |
NE |
CZ |
106.1 |
180.0 |
| CG |
CD |
NE |
HE |
286.0 |
360.0 |
| HD2 |
CD |
CG |
HD3 |
120.3 |
120.0 |
| HG2 |
CG |
CB |
HB2 |
101.7 |
180.0 |
| HG2 |
CG |
CB |
HB3 |
224.3 |
299.9 |
| CB |
CG |
HG2 |
CD |
122.5 |
120.0 |
| CB |
CG |
HG2 |
HG3 |
241.2 |
240.1 |
| CD |
CG |
HG2 |
HG3 |
118.7 |
120.1 |
| HG2 |
CG |
CD |
NE |
152.2 |
300.0 |
| HG2 |
CG |
CD |
HD2 |
32.6 |
180.0 |
| HG2 |
CG |
CD |
HD3 |
272.2 |
60.0 |
| HG3 |
CG |
CB |
HB2 |
339.7 |
60.1 |
| HG3 |
CG |
CB |
HB3 |
102.3 |
180.0 |
| CB |
CG |
HG3 |
CD |
236.3 |
240.0 |
| CB |
CG |
HG3 |
HG2 |
118.2 |
119.9 |
| CD |
CG |
HG3 |
HG2 |
241.9 |
239.9 |
| HG3 |
CG |
CD |
NE |
274.2 |
60.0 |
| HG3 |
CG |
CD |
HD2 |
154.5 |
300.0 |
| HG3 |
CG |
CD |
HD3 |
34.2 |
180.0 |
| NE |
CD |
CG |
HG2 |
152.2 |
300.0 |
| NE |
CD |
CG |
HG3 |
274.2 |
60.0 |
| CG |
CD |
NE |
HD2 |
240.3 |
240.0 |
| CG |
CD |
NE |
HD3 |
120.0 |
120.0 |
| HD2 |
CD |
NE |
HD3 |
239.7 |
240.0 |
| CZ |
NE |
CD |
HE |
180.0 |
180.1 |
| CD |
NE |
CZ |
NH1 |
0.3 |
180.0 |
| CD |
NE |
CZ |
NH2 |
180.1 |
360.0 |
| HD2 |
CD |
CG |
HG2 |
32.6 |
180.0 |
| HD2 |
CD |
CG |
HG3 |
154.5 |
300.0 |
| CG |
CD |
HD2 |
NE |
120.5 |
120.0 |
| CG |
CD |
HD2 |
HD3 |
240.2 |
240.0 |
| NE |
CD |
HD2 |
HD3 |
119.8 |
120.0 |
| HD2 |
CD |
NE |
CZ |
225.7 |
300.0 |
| HD2 |
CD |
NE |
HE |
45.7 |
120.0 |
| HD3 |
CD |
CG |
HG2 |
272.2 |
60.0 |
| HD3 |
CD |
CG |
HG3 |
34.2 |
180.0 |
| CG |
CD |
HD3 |
NE |
239.3 |
240.0 |
| CG |
CD |
HD3 |
HD2 |
119.7 |
120.0 |
| NE |
CD |
HD3 |
HD2 |
240.3 |
240.0 |
| HD3 |
CD |
NE |
CZ |
346.1 |
60.1 |
| HD3 |
CD |
NE |
HE |
166.1 |
240.0 |
| CZ |
NE |
CD |
HD2 |
225.7 |
300.0 |
| CZ |
NE |
CD |
HD3 |
346.1 |
60.1 |
| CD |
NE |
CZ |
HE |
180.0 |
179.9 |
| NH1 |
CZ |
NE |
NH2 |
180.2 |
180.0 |
| NE |
CZ |
NH1 |
C1 |
214.5 |
180.0 |
| NE |
CZ |
NH1 |
HH1 |
34.5 |
359.9 |
| NE |
CZ |
NH2 |
HH21 |
180.1 |
360.0 |
| NE |
CZ |
NH2 |
HH22 |
0.1 |
180.0 |
| HE |
NE |
CD |
HD2 |
45.7 |
120.0 |
| HE |
NE |
CD |
HD3 |
166.1 |
240.0 |
| CD |
NE |
HE |
CZ |
180.0 |
180.1 |
| HE |
NE |
CZ |
NH1 |
180.3 |
0.1 |
| HE |
NE |
CZ |
NH2 |
0.1 |
180.0 |
| NH1 |
CZ |
NE |
HE |
180.3 |
0.1 |
| NE |
CZ |
NH1 |
NH2 |
179.8 |
180.0 |
| NH1 |
CZ |
NH2 |
HH21 |
359.9 |
180.0 |
| NH1 |
CZ |
NH2 |
HH22 |
179.9 |
0.0 |
| C1 |
NH1 |
CZ |
HH1 |
180.0 |
180.1 |
| CZ |
NH1 |
C1 |
C2 |
162.0 |
180.0 |
| CZ |
NH1 |
C1 |
H11 |
42.1 |
60.0 |
| CZ |
NH1 |
C1 |
H12 |
282.0 |
300.0 |
| NH2 |
CZ |
NE |
HE |
0.1 |
180.0 |
| NE |
CZ |
NH2 |
NH1 |
180.2 |
180.0 |
| NH2 |
CZ |
NH1 |
C1 |
34.7 |
0.0 |
| NH2 |
CZ |
NH1 |
HH1 |
214.7 |
180.0 |
| HH21 |
NH2 |
CZ |
HH22 |
180.0 |
180.0 |
| C1 |
NH1 |
CZ |
NH2 |
34.7 |
0.0 |
| CZ |
NH1 |
C1 |
HH1 |
180.0 |
179.9 |
| C2 |
C1 |
NH1 |
H11 |
119.9 |
120.0 |
| C2 |
C1 |
NH1 |
H12 |
240.0 |
240.0 |
| NH1 |
C1 |
C2 |
C3 |
284.6 |
180.0 |
| NH1 |
C1 |
C2 |
H21 |
164.8 |
60.0 |
| NH1 |
C1 |
C2 |
H22 |
44.6 |
300.0 |
| H11 |
C1 |
NH1 |
H12 |
120.1 |
120.0 |
| HH1 |
NH1 |
CZ |
NH2 |
214.7 |
180.0 |
| CZ |
NH1 |
HH1 |
C1 |
180.0 |
180.1 |
| HH1 |
NH1 |
C1 |
C2 |
342.0 |
0.0 |
| HH1 |
NH1 |
C1 |
H11 |
222.1 |
240.0 |
| HH1 |
NH1 |
C1 |
H12 |
102.0 |
120.0 |
| CZ |
NH2 |
HH21 |
HH22 |
180.0 |
180.0 |
| CZ |
NH2 |
HH22 |
HH21 |
180.0 |
180.0 |
| C2 |
C1 |
NH1 |
HH1 |
342.0 |
0.0 |
| NH1 |
C1 |
C2 |
H11 |
240.1 |
240.0 |
| NH1 |
C1 |
C2 |
H12 |
120.0 |
120.0 |
| H11 |
C1 |
C2 |
H12 |
239.9 |
240.0 |
| C3 |
C2 |
C1 |
H21 |
119.8 |
120.0 |
| C3 |
C2 |
C1 |
H22 |
240.0 |
240.0 |
| C1 |
C2 |
C3 |
H31 |
296.6 |
300.0 |
| C1 |
C2 |
C3 |
H32 |
176.6 |
60.0 |
| C1 |
C2 |
C3 |
H33 |
56.6 |
180.0 |
| H21 |
C2 |
C1 |
H22 |
120.3 |
120.0 |
| H11 |
C1 |
NH1 |
HH1 |
222.1 |
240.0 |
| NH1 |
C1 |
H11 |
C2 |
120.1 |
120.0 |
| NH1 |
C1 |
H11 |
H12 |
240.1 |
240.0 |
| C2 |
C1 |
H11 |
H12 |
120.0 |
120.0 |
| H11 |
C1 |
C2 |
C3 |
44.5 |
300.0 |
| H11 |
C1 |
C2 |
H21 |
284.8 |
180.1 |
| H11 |
C1 |
C2 |
H22 |
164.5 |
60.0 |
| H12 |
C1 |
NH1 |
HH1 |
102.0 |
120.0 |
| NH1 |
C1 |
H12 |
C2 |
239.9 |
240.0 |
| NH1 |
C1 |
H12 |
H11 |
119.9 |
120.1 |
| C2 |
C1 |
H12 |
H11 |
240.0 |
240.0 |
| H12 |
C1 |
C2 |
C3 |
164.6 |
60.0 |
| H12 |
C1 |
C2 |
H21 |
44.9 |
300.0 |
| H12 |
C1 |
C2 |
H22 |
284.6 |
180.0 |
| C3 |
C2 |
C1 |
H11 |
44.5 |
300.0 |
| C3 |
C2 |
C1 |
H12 |
164.6 |
60.0 |
| C1 |
C2 |
C3 |
H21 |
240.3 |
240.0 |
| C1 |
C2 |
C3 |
H22 |
120.0 |
120.1 |
| H21 |
C2 |
C3 |
H22 |
239.7 |
240.1 |
| H31 |
C3 |
C2 |
H32 |
120.0 |
240.0 |
| H31 |
C3 |
C2 |
H33 |
240.0 |
120.0 |
| H32 |
C3 |
C2 |
H33 |
120.0 |
240.0 |
| H21 |
C2 |
C1 |
H11 |
284.8 |
180.1 |
| H21 |
C2 |
C1 |
H12 |
44.9 |
300.0 |
| C1 |
C2 |
H21 |
C3 |
120.3 |
120.0 |
| C1 |
C2 |
H21 |
H22 |
240.2 |
240.0 |
| C3 |
C2 |
H21 |
H22 |
119.9 |
119.9 |
| H21 |
C2 |
C3 |
H31 |
56.4 |
60.0 |
| H21 |
C2 |
C3 |
H32 |
296.3 |
180.0 |
| H21 |
C2 |
C3 |
H33 |
176.4 |
300.0 |
| H22 |
C2 |
C1 |
H11 |
164.5 |
60.0 |
| H22 |
C2 |
C1 |
H12 |
284.6 |
180.0 |
| C1 |
C2 |
H22 |
C3 |
239.5 |
239.9 |
| C1 |
C2 |
H22 |
H21 |
119.7 |
120.0 |
| C3 |
C2 |
H22 |
H21 |
240.2 |
240.1 |
| H22 |
C2 |
C3 |
H31 |
176.6 |
180.0 |
| H22 |
C2 |
C3 |
H32 |
56.6 |
299.9 |
| H22 |
C2 |
C3 |
H33 |
296.6 |
60.0 |
| H31 |
C3 |
C2 |
H21 |
56.4 |
60.0 |
| H31 |
C3 |
C2 |
H22 |
176.6 |
180.0 |
| C2 |
C3 |
H31 |
H32 |
240.0 |
120.0 |
| C2 |
C3 |
H31 |
H33 |
120.1 |
240.0 |
| H32 |
C3 |
H31 |
H33 |
240.1 |
120.0 |
| H32 |
C3 |
C2 |
H21 |
296.3 |
180.0 |
| H32 |
C3 |
C2 |
H22 |
56.6 |
299.9 |
| C2 |
C3 |
H32 |
H31 |
120.0 |
240.0 |
| C2 |
C3 |
H32 |
H33 |
240.0 |
120.0 |
| H31 |
C3 |
H32 |
H33 |
120.0 |
240.1 |
| H33 |
C3 |
C2 |
H21 |
176.4 |
300.0 |
| H33 |
C3 |
C2 |
H22 |
296.6 |
60.0 |
| C2 |
C3 |
H33 |
H31 |
240.0 |
120.0 |
| C2 |
C3 |
H33 |
H32 |
120.0 |
240.0 |
| H31 |
C3 |
H33 |
H32 |
240.0 |
119.9 |