PDB Chemical Component 3AN

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 3AN

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
PB O1B 1.469 1.479
PB O2B 1.503 1.610
PB O3B 1.477 1.609
PB O3A 1.606 1.610
O2B HOB2 0.950 0.968
O3B HOB3 0.950 0.967
PA O1A 1.515 1.610
PA O2A 1.471 1.480
PA O3A 1.601 1.609
PA O5' 1.584 1.610
O1A HOA1 0.951 0.967
O5' C5' 1.392 1.429
C5' C4' 1.563 1.529
C5' H5'1 1.115 1.090
C5' H5'2 1.115 1.090
C4' O4' 1.434 1.447
C4' C3' 1.517 1.544
C4' HC'4 1.115 1.090
O4' C1' 1.445 1.444
C3' N3' 1.321 1.469
C3' C2' 1.528 1.545
C3' HC'3 1.115 1.090
N3' H3'1 1.103 1.009
N3' H3'2 1.103 1.008
C2' O2' 1.472 1.429
C2' C1' 1.520 1.544
C2' HC'2 1.115 1.090
O2' HO'2 0.950 0.967
C1' N9 1.521 1.465
C1' HC'1 1.115 1.090
N9 C8 1.397 1.363
N9 C4 1.399 1.372
C8 N7 1.293 1.302
C8 HC8 1.103 1.080
N7 C5 1.395 1.354
C5 C6 1.405 1.406
C5 C4 1.381 1.405
C6 N6 1.318 1.383
C6 N1 1.376 1.329
N6 HN61 1.103 0.971
N6 HN62 1.103 0.971
N1 C2 1.361 1.321
C2 N3 1.368 1.316
C2 HC2 1.103 1.079
N3 C4 1.399 1.329

Bond Angles for 3AN

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O1B PB O2B 114.0 109.5
O1B PB O3B 116.8 109.5
O1B PB O3A 100.4 109.5
O2B PB O3B 113.2 109.5
O2B PB O3A 106.8 109.4
PB O2B HOB2 114.0 106.8
O3B PB O3A 103.8 109.5
PB O3B HOB3 116.8 106.8
PB O3A PA 128.5 106.8
O1A PA O2A 122.0 109.5
O1A PA O3A 106.0 109.5
O1A PA O5' 110.1 109.4
PA O1A HOA1 122.0 106.8
O2A PA O3A 108.7 109.5
O2A PA O5' 106.0 109.5
O3A PA O5' 102.4 109.5
PA O5' C5' 117.1 106.8
O5' C5' C4' 116.9 109.5
O5' C5' H5'1 109.5 109.5
O5' C5' H5'2 109.5 109.5
C4' C5' H5'1 109.5 109.4
C4' C5' H5'2 109.6 109.4
C5' C4' O4' 110.7 110.4
C5' C4' C3' 109.7 110.7
C5' C4' HC'4 110.8 110.4
H5'1 C5' H5'2 100.6 109.5
O4' C4' C3' 103.8 104.7
O4' C4' HC'4 110.8 110.3
C4' O4' C1' 108.1 105.4
C3' C4' HC'4 110.8 110.2
C4' C3' N3' 109.6 110.6
C4' C3' C2' 106.0 104.2
C4' C3' HC'3 108.3 110.5
O4' C1' C2' 100.7 104.8
O4' C1' N9 117.3 110.5
O4' C1' HC'1 105.6 110.4
N3' C3' C2' 116.1 110.5
N3' C3' HC'3 108.3 110.5
C3' N3' H3'1 109.7 106.7
C3' N3' H3'2 116.1 106.7
C2' C3' HC'3 108.3 110.5
C3' C2' O2' 119.0 110.5
C3' C2' C1' 100.0 104.1
C3' C2' HC'2 110.9 110.5
H3'1 N3' H3'2 105.9 106.7
O2' C2' C1' 104.4 110.6
O2' C2' HC'2 110.8 110.5
C2' O2' HO'2 119.0 106.8
C1' C2' HC'2 110.9 110.5
C2' C1' N9 120.8 110.4
C2' C1' HC'1 105.6 110.4
N9 C1' HC'1 105.6 110.3
C1' N9 C8 131.7 126.3
C1' N9 C4 123.4 126.3
C8 N9 C4 103.5 107.4
N9 C8 N7 115.9 110.0
N9 C8 HC8 122.0 125.0
N9 C4 C5 105.9 106.0
N9 C4 N3 127.7 135.0
N7 C8 HC8 122.0 125.0
C8 N7 C5 102.9 109.4
N7 C5 C6 130.7 134.7
N7 C5 C4 111.7 107.2
C6 C5 C4 117.5 118.2
C5 C6 N6 117.3 120.8
C5 C6 N1 119.2 118.5
C5 C4 N3 126.4 119.0
N6 C6 N1 120.6 120.8
C6 N6 HN61 117.3 120.0
C6 N6 HN62 120.6 120.0
C6 N1 C2 117.7 121.2
HN61 N6 HN62 119.2 120.0
N1 C2 N3 128.9 122.4
N1 C2 HC2 115.6 118.7
N3 C2 HC2 115.5 118.8
C2 N3 C4 110.1 120.7

Torsion Angles for 3AN

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O2B PB O1B O3B 225.0 120.0
O2B PB O1B O3A 113.7 240.0
O1B PB O2B HOB2 180.0 299.9
O3B PB O1B O3A 248.7 120.0
O1B PB O3B HOB3 180.0 180.0
O1B PB O3A PA 100.4 60.0
O1B PB O2B O3B 136.6 239.9
O1B PB O2B O3A 250.1 120.0
O3B PB O2B O3A 113.5 240.0
O2B PB O3B HOB3 315.3 60.0
O2B PB O3A PA 341.3 180.0
O1B PB O3B O2B 224.7 120.0
O1B PB O3B O3A 109.3 240.0
O2B PB O3B O3A 244.7 120.0
O3B PB O2B HOB2 43.4 60.0
O3B PB O3A PA 221.5 300.0
O1B PB O3A O2B 119.1 240.0
O1B PB O3A O3B 238.9 120.0
O2B PB O3A O3B 119.8 240.0
O3A PB O2B HOB2 289.8 180.0
O3A PB O3B HOB3 70.7 300.0
O1A PA O3A PB 33.4 300.0
O2A PA O3A PB 166.2 60.0
PB O3A PA O5' 278.0 180.1
HOB2 O2B PB O3B 43.4 60.0
HOB2 O2B PB O3A 289.8 180.0
HOB3 O3B PB O3A 70.7 300.0
PB O3A PA O1A 33.4 300.0
O2A PA O1A O3A 235.1 240.0
O2A PA O1A O5' 125.1 120.0
O3A PA O1A O5' 250.0 240.0
O1A PA O5' C5' 164.1 60.0
PB O3A PA O2A 166.2 60.0
O1A PA O2A O3A 123.6 120.0
O1A PA O2A O5' 233.1 240.1
O2A PA O1A HOA1 180.0 180.0
O3A PA O2A O5' 109.4 120.0
O2A PA O5' C5' 30.3 300.1
O1A PA O3A O2A 227.2 240.0
O1A PA O3A O5' 115.3 120.0
O3A PA O1A HOA1 304.9 300.0
O2A PA O3A O5' 248.1 240.0
O3A PA O5' C5' 276.5 180.0
O1A PA O5' O2A 133.8 120.0
O1A PA O5' O3A 247.7 240.0
O5' PA O1A HOA1 54.9 60.0
O2A PA O5' O3A 113.8 120.0
PA O5' C5' C4' 125.2 180.0
PA O5' C5' H5'1 359.9 60.0
PA O5' C5' H5'2 250.5 299.9
HOA1 O1A PA O2A 180.0 180.0
HOA1 O1A PA O3A 304.9 300.0
HOA1 O1A PA O5' 54.9 60.0
C4' C5' O5' H5'1 125.3 120.0
C4' C5' O5' H5'2 234.7 240.0
O5' C5' C4' O4' 152.4 61.4
O5' C5' C4' C3' 266.5 176.9
O5' C5' C4' HC'4 29.1 299.2
H5'1 C5' O5' H5'2 109.4 120.0
O5' C5' C4' H5'1 234.7 240.0
O5' C5' C4' H5'2 125.3 120.0
H5'1 C5' C4' H5'2 250.6 240.1
O4' C4' C5' C3' 246.0 244.6
O4' C4' C5' HC'4 123.4 122.2
C5' C4' O4' C1' 92.1 159.5
C3' C4' C5' HC'4 237.4 237.6
C5' C4' C3' N3' 111.9 98.6
C5' C4' C3' C2' 237.9 217.3
C5' C4' C3' HC'3 353.9 336.0
O5' C5' H5'1 C4' 129.4 120.0
O5' C5' H5'1 H5'2 244.7 240.0
C4' C5' H5'1 H5'2 115.3 119.9
H5'1 C5' C4' O4' 277.7 181.4
H5'1 C5' C4' C3' 31.8 296.9
H5'1 C5' C4' HC'4 154.4 59.3
O5' C5' H5'2 C4' 230.6 240.0
O5' C5' H5'2 H5'1 115.3 120.0
C4' C5' H5'2 H5'1 244.7 240.1
H5'2 C5' C4' O4' 27.2 301.4
H5'2 C5' C4' C3' 141.2 56.8
H5'2 C5' C4' HC'4 263.8 179.2
O4' C4' C5' H5'1 277.7 181.4
O4' C4' C5' H5'2 27.2 301.4
C5' C4' O4' C3' 117.7 119.2
C5' C4' O4' HC'4 236.7 237.8
C3' C4' O4' HC'4 119.0 118.6
O4' C4' C3' N3' 230.3 217.5
O4' C4' C3' C2' 356.3 336.2
O4' C4' C3' HC'3 112.3 94.9
C4' O4' C1' C2' 44.7 319.6
C4' O4' C1' N9 271.5 200.7
C4' O4' C1' HC'1 154.3 78.4
C3' C4' C5' H5'1 31.8 296.9
C3' C4' C5' H5'2 141.2 56.8
C5' C4' C3' O4' 241.6 241.1
C5' C4' C3' HC'4 122.6 122.5
O4' C4' C3' HC'4 241.0 241.4
C3' C4' O4' C1' 334.4 40.3
N3' C3' C4' C2' 234.0 241.3
N3' C3' C4' HC'3 118.0 122.6
C4' C3' N3' H3'1 180.0 178.1
C4' C3' N3' H3'2 300.0 291.9
C2' C3' C4' HC'3 244.0 241.3
C4' C3' C2' O2' 276.4 241.1
C4' C3' C2' C1' 29.1 359.9
C4' C3' C2' HC'2 146.2 118.5
HC'4 C4' C5' H5'1 154.4 59.3
HC'4 C4' C5' H5'2 263.8 179.2
C5' C4' HC'4 O4' 123.3 122.2
C5' C4' HC'4 C3' 238.0 237.3
O4' C4' HC'4 C3' 114.7 115.1
HC'4 C4' O4' C1' 215.4 281.7
HC'4 C4' C3' N3' 349.3 336.1
HC'4 C4' C3' C2' 115.3 94.8
HC'4 C4' C3' HC'3 231.3 213.5
C1' O4' C4' C3' 334.4 40.3
C1' O4' C4' HC'4 215.4 281.7
C3' C2' C1' O4' 316.4 24.0
O2' C2' C1' O4' 80.0 142.7
O4' C1' C2' HC'2 199.4 265.3
C2' C1' O4' N9 133.1 118.9
C2' C1' O4' HC'1 250.4 241.2
N9 C1' O4' HC'1 117.2 122.3
O4' C1' N9 C8 58.6 25.5
O4' C1' N9 C4 223.0 205.1
N3' C3' C4' HC'4 349.3 336.1
C4' C3' N3' C2' 120.0 114.8
C4' C3' N3' HC'3 242.0 237.4
C2' C3' N3' HC'3 122.0 122.6
N3' C3' C2' O2' 38.4 359.9
N3' C3' C2' C1' 151.1 118.7
N3' C3' C2' HC'2 268.1 237.3
H3'1 N3' C3' H3'2 240.0 246.2
C2' C3' C4' HC'4 115.3 94.8
C4' C3' C2' N3' 238.0 241.2
C4' C3' C2' HC'3 116.0 118.7
O4' C1' C2' C3' 316.4 24.0
N3' C3' C2' HC'3 238.0 237.4
C2' C3' N3' H3'1 60.0 63.3
C2' C3' N3' H3'2 180.0 177.1
O2' C2' C3' C1' 247.3 241.2
O2' C2' C3' HC'2 130.3 122.6
C3' C2' O2' HO'2 180.0 180.0
C1' C2' C3' HC'2 243.0 241.4
C3' C2' C1' N9 87.4 142.9
C3' C2' C1' HC'1 206.7 265.2
HC'3 C3' C4' HC'4 231.3 213.5
C4' C3' HC'3 N3' 118.8 122.6
C4' C3' HC'3 C2' 245.5 245.2
N3' C3' HC'3 C2' 126.7 122.6
HC'3 C3' N3' H3'1 298.0 300.7
HC'3 C3' N3' H3'2 58.0 54.5
HC'3 C3' C2' O2' 160.4 122.5
HC'3 C3' C2' C1' 273.1 241.2
HC'3 C3' C2' HC'2 30.1 359.8
H3'1 N3' C3' C2' 60.0 63.3
H3'1 N3' C3' HC'3 298.0 300.7
C3' N3' H3'1 H3'2 126.0 113.8
H3'2 N3' C3' C2' 180.0 177.1
H3'2 N3' C3' HC'3 58.0 54.5
C3' N3' H3'2 H3'1 238.0 246.2
O4' C1' C2' O2' 80.0 142.7
O2' C2' C3' HC'3 160.4 122.5
C3' C2' O2' C1' 110.3 114.7
C3' C2' O2' HC'2 229.7 237.3
C1' C2' O2' HC'2 119.4 122.6
O2' C2' C1' N9 210.9 261.6
O2' C2' C1' HC'1 330.3 23.9
O4' C1' C2' N9 229.0 241.1
O4' C1' C2' HC'1 109.7 118.8
C1' C2' C3' HC'3 273.1 241.2
C3' C2' C1' O2' 236.4 241.3
C3' C2' C1' HC'2 117.0 118.7
O2' C2' C1' HC'2 240.6 237.4
C1' C2' O2' HO'2 69.7 65.3
N9 C1' C2' HC'1 240.6 237.8
C2' C1' N9 C8 295.2 270.1
C2' C1' N9 C4 99.6 89.7
HC'2 C2' C3' HC'3 30.1 359.8
C3' C2' HC'2 O2' 134.4 122.6
C3' C2' HC'2 C1' 249.9 245.4
O2' C2' HC'2 C1' 115.5 122.7
HC'2 C2' O2' HO'2 310.3 302.6
HC'2 C2' C1' N9 330.3 24.3
HC'2 C2' C1' HC'1 89.7 146.5
HO'2 O2' C2' C1' 69.7 65.3
HO'2 O2' C2' HC'2 310.3 302.6
O4' C1' N9 C2' 123.4 115.4
O4' C1' N9 HC'1 242.8 237.7
N9 C1' C2' HC'2 330.3 24.3
C2' C1' N9 HC'1 119.4 122.2
C8 N9 C1' C4 195.6 180.4
C1' N9 C8 N7 166.4 180.0
C1' N9 C8 HC8 346.4 359.9
C1' N9 C4 C5 191.8 179.9
C1' N9 C4 N3 11.7 0.8
O4' C1' HC'1 C2' 253.9 244.6
O4' C1' HC'1 N9 124.9 122.4
HC'1 C1' C2' HC'2 89.7 146.5
C2' C1' HC'1 N9 231.0 237.7
HC'1 C1' N9 C8 175.8 147.8
HC'1 C1' N9 C4 340.2 327.4
C8 N9 C1' HC'1 175.8 147.8
C1' N9 C8 C4 166.6 179.7
C8 N9 C4 C5 359.9 359.6
C8 N9 C4 N3 179.8 180.5
N7 C8 N9 HC8 180.0 180.1
N9 C8 N7 C5 0.4 359.9
C4 N9 C1' HC'1 340.2 327.4
C1' N9 C4 C8 191.9 180.3
C4 N9 C8 N7 359.8 0.3
C4 N9 C8 HC8 179.7 180.2
N7 C5 C4 N9 0.4 0.4
C6 C5 C4 N9 178.9 180.2
C5 C4 N9 N3 180.1 179.1
C2 N3 C4 N9 179.0 179.6
N7 C8 N9 C4 359.8 0.3
N9 C8 N7 HC8 180.0 179.9
C8 N7 C5 C6 181.3 180.0
C8 N7 C5 C4 359.5 359.8
HC8 C8 N9 C4 179.7 180.2
N9 C8 HC8 N7 180.0 180.1
HC8 C8 N7 C5 180.5 180.0
N9 C4 C5 N7 0.4 0.4
C5 N7 C8 HC8 180.5 180.0
C6 C5 N7 C4 181.7 180.2
N7 C5 C6 N6 20.5 0.1
N7 C5 C6 N1 181.4 180.0
N7 C5 C4 N3 180.5 179.7
N9 C4 C5 C6 178.9 180.2
N7 C5 C6 C4 178.2 179.8
C6 C5 C4 N3 359.0 359.5
N6 C6 C5 N1 199.2 180.1
C5 C6 N6 HN61 180.0 179.9
C5 C6 N6 HN62 340.5 360.0
C5 C6 N1 C2 356.9 0.1
N9 C4 C5 N3 179.9 180.7
N7 C5 C4 C6 181.5 180.1
C4 C5 C6 N6 202.4 180.3
C4 C5 C6 N1 3.2 0.2
C2 N3 C4 C5 358.9 0.5
N6 C6 C5 C4 202.4 180.3
C5 C6 N6 N1 160.6 179.9
N6 C6 N1 C2 157.1 180.0
HN61 N6 C6 HN62 199.5 180.0
N1 C6 C5 C4 3.2 0.2
C5 C6 N1 N6 199.8 180.1
N1 C6 N6 HN61 19.5 0.1
N1 C6 N6 HN62 180.0 180.1
C6 N1 C2 N3 0.7 360.0
C6 N1 C2 HC2 180.7 179.9
HN61 N6 C6 N1 19.5 0.1
C6 N6 HN61 HN62 160.8 180.0
HN62 N6 C6 N1 180.0 180.1
C6 N6 HN62 HN61 199.9 180.0
N3 C2 N1 HC2 180.0 180.0
N1 C2 N3 C4 1.4 359.7
N9 C4 N3 C2 179.0 179.6
C5 C4 N3 C2 358.9 0.5
N1 C2 N3 HC2 180.0 180.0
N1 C2 HC2 N3 180.0 180.0
HC2 C2 N3 C4 181.3 179.7
N9 C4 N3 C5 180.1 179.0
C4 N3 C2 HC2 181.3 179.7