PDB Chemical Component 3AG

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 3AG

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.519	1.508
C1	HC11	1.114	1.090
C1	HC12	1.116	1.090
C1	HC13	1.115	1.090
C2	C3	1.511	1.508
C2	C4	1.352	1.310
C3	HC31	1.115	1.090
C3	HC32	1.115	1.090
C3	HC33	1.116	1.090
C4	C5	1.507	1.507
C4	HC4	1.103	1.080
O1	P1	1.591	1.544
C5	C6	1.543	1.530
C5	HC51	1.116	1.090
C5	HC52	1.115	1.089
C6	N1	1.480	1.469
C6	HC61	1.115	1.091
C6	HC62	1.115	1.089
N1	C7	1.486	1.469
N1	C9	1.476	1.468
C7	C8	1.554	1.530
C7	HC71	1.115	1.090
C7	HC72	1.115	1.089
C8	O2	1.430	1.429
C8	HC81	1.115	1.090
C8	HC82	1.115	1.090
C9	HC91	1.115	1.090
C9	HC92	1.114	1.089
C9	HC93	1.115	1.090
O2	P1	1.609	1.610
P1	O3	1.611	1.610
P1	O4	1.599	1.545
O3	P2	1.605	1.610
P2	O5	1.592	1.567
P2	O6	1.604	1.566
P2	O7	1.601	1.567

Bond Angles for 3AG

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	HC11	114.4	109.5
C2	C1	HC12	110.4	109.5
C2	C1	HC13	110.4	109.5
C1	C2	C3	114.4	120.0
C1	C2	C4	125.1	120.0
HC11	C1	HC12	110.4	109.4
HC11	C1	HC13	110.5	109.5
HC12	C1	HC13	99.8	109.5
C3	C2	C4	120.5	120.0
C2	C3	HC31	114.4	109.4
C2	C3	HC32	110.4	109.4
C2	C3	HC33	110.5	109.5
C2	C4	C5	126.6	120.0
C2	C4	HC4	110.5	120.0
HC31	C3	HC32	110.4	109.5
HC31	C3	HC33	110.4	109.5
HC32	C3	HC33	99.8	109.5
C5	C4	HC4	122.9	120.0
C4	C5	C6	112.0	109.5
C4	C5	HC51	111.3	109.4
C4	C5	HC52	111.2	109.5
O1	P1	O2	108.8	109.5
O1	P1	O3	110.2	109.5
O1	P1	O4	111.2	109.5
C6	C5	HC51	111.3	109.4
C6	C5	HC52	111.3	109.5
C5	C6	N1	117.4	109.5
C5	C6	HC61	109.3	109.5
C5	C6	HC62	109.3	109.5
HC51	C5	HC52	99.1	109.5
N1	C6	HC61	109.4	109.5
N1	C6	HC62	109.3	109.5
C6	N1	C7	109.8	106.7
C6	N1	C9	111.2	106.7
HC61	C6	HC62	100.8	109.5
C7	N1	C9	110.9	106.7
N1	C7	C8	118.3	109.5
N1	C7	HC71	109.0	109.5
N1	C7	HC72	109.0	109.4
N1	C9	HC91	111.2	109.5
N1	C9	HC92	111.6	109.5
N1	C9	HC93	111.6	109.5
C8	C7	HC71	109.1	109.5
C8	C7	HC72	109.1	109.5
C7	C8	O2	109.9	109.5
C7	C8	HC81	112.0	109.5
C7	C8	HC82	112.0	109.5
HC71	C7	HC72	101.0	109.5
O2	C8	HC81	112.1	109.5
O2	C8	HC82	112.0	109.5
C8	O2	P1	120.8	106.8
HC81	C8	HC82	98.4	109.4
HC91	C9	HC92	111.6	109.4
HC91	C9	HC93	111.5	109.4
HC92	C9	HC93	98.8	109.5
O2	P1	O3	107.1	109.5
O2	P1	O4	109.3	109.4
O3	P1	O4	110.1	109.4
P1	O3	P2	117.1	106.8
O3	P2	O5	110.1	109.4
O3	P2	O6	109.6	109.5
O3	P2	O7	107.3	109.4
O5	P2	O6	109.6	109.5
O5	P2	O7	110.1	109.5
O6	P2	O7	110.0	109.5

Torsion Angles for 3AG

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
HC11	C1	C2	HC12	234.8	240.0
HC11	C1	C2	HC13	125.3	120.0
HC12	C1	C2	HC13	250.6	240.0
C3	C2	C1	C4	179.9	180.0
C1	C2	C3	HC31	180.0	180.0
C1	C2	C3	HC32	305.3	299.9
C1	C2	C3	HC33	54.7	60.0
C1	C2	C4	C5	359.9	354.1
C1	C2	C4	HC4	180.0	174.1
C2	C1	HC11	HC12	125.2	120.0
C2	C1	HC11	HC13	234.7	240.0
HC11	C1	C2	C3	180.1	265.0
HC11	C1	C2	C4	0.2	84.9
HC12	C1	HC11	HC13	109.4	120.0
C2	C1	HC12	HC11	232.5	240.0
C2	C1	HC12	HC13	116.2	120.0
HC12	C1	C2	C3	305.3	24.9
HC12	C1	C2	C4	125.4	204.9
HC11	C1	HC12	HC13	243.7	240.0
C2	C1	HC13	HC11	127.6	120.0
C2	C1	HC13	HC12	243.8	240.0
HC13	C1	C2	C3	54.7	145.0
HC13	C1	C2	C4	234.8	324.9
HC11	C1	HC13	HC12	116.2	120.0
C3	C2	C1	HC11	180.1	265.0
C3	C2	C1	HC12	305.3	24.9
C3	C2	C1	HC13	54.7	145.0
C1	C2	C3	C4	180.1	180.0
C3	C2	C4	C5	180.0	174.1
C3	C2	C4	HC4	0.1	354.1
HC31	C3	C2	HC32	234.7	240.0
HC31	C3	C2	HC33	125.2	120.0
HC32	C3	C2	HC33	250.6	239.9
C4	C2	C1	HC11	0.2	84.9
C4	C2	C1	HC12	125.4	204.9
C4	C2	C1	HC13	234.8	324.9
C1	C2	C4	C3	179.9	180.0
C4	C2	C3	HC31	359.9	0.0
C4	C2	C3	HC32	125.2	120.0
C4	C2	C3	HC33	234.6	240.0
C5	C4	C2	HC4	180.0	180.0
C2	C4	C5	C6	96.0	233.9
C2	C4	C5	HC51	221.3	114.0
C2	C4	C5	HC52	330.7	353.9
HC31	C3	C2	C4	359.9	0.0
C2	C3	HC31	HC32	125.3	119.9
C2	C3	HC31	HC33	234.7	240.0
HC32	C3	HC31	HC33	109.4	120.1
HC32	C3	C2	C4	125.2	120.0
C2	C3	HC32	HC31	232.5	240.1
C2	C3	HC32	HC33	116.3	120.0
HC31	C3	HC32	HC33	243.8	240.0
HC33	C3	C2	C4	234.6	240.0
C2	C3	HC33	HC31	127.5	120.0
C2	C3	HC33	HC32	243.7	240.0
HC31	C3	HC33	HC32	116.2	120.0
C2	C4	C5	HC4	180.0	180.0
C6	C5	C4	HC51	234.7	119.9
C6	C5	C4	HC52	125.3	240.0
C4	C5	C6	N1	312.2	180.0
C4	C5	C6	HC61	77.5	60.0
C4	C5	C6	HC62	187.0	300.0
HC51	C5	C4	HC52	250.6	120.0
C2	C4	HC4	C5	180.0	180.0
HC4	C4	C5	C6	275.9	53.9
HC4	C4	C5	HC51	41.2	293.9
HC4	C4	C5	HC52	150.6	173.9
C8	O2	P1	O1	164.3	295.0
O2	P1	O1	O3	117.2	240.0
O2	P1	O1	O4	239.5	120.0
O3	P1	O1	O4	122.4	240.0
O1	P1	O3	P2	297.3	80.0
C6	C5	C4	HC4	275.9	53.9
C4	C5	C6	HC51	125.3	240.1
C4	C5	C6	HC52	234.8	120.0
HC51	C5	C6	HC52	109.5	240.0
N1	C6	C5	HC61	234.7	120.0
N1	C6	C5	HC62	125.2	240.0
C5	C6	N1	C7	148.0	190.0
C5	C6	N1	C9	271.1	76.3
HC61	C6	C5	HC62	250.5	120.0
HC51	C5	C4	HC4	41.2	293.9
C4	C5	HC51	C6	234.3	119.9
C4	C5	HC51	HC52	117.1	240.0
C6	C5	HC51	HC52	242.8	120.0
HC51	C5	C6	N1	187.0	299.9
HC51	C5	C6	HC61	312.2	180.0
HC51	C5	C6	HC62	61.7	60.0
HC52	C5	C4	HC4	150.6	173.9
C4	C5	HC52	C6	125.7	240.0
C4	C5	HC52	HC51	242.9	120.0
C6	C5	HC52	HC51	117.2	240.0
HC52	C5	C6	N1	77.5	60.0
HC52	C5	C6	HC61	202.8	300.0
HC52	C5	C6	HC62	312.2	180.0
N1	C6	C5	HC51	187.0	299.9
N1	C6	C5	HC52	77.5	60.0
C5	C6	N1	HC61	125.2	240.0
C5	C6	N1	HC62	234.8	120.0
HC61	C6	N1	HC62	109.5	240.0
C7	N1	C6	C9	236.9	113.8
C6	N1	C7	C8	56.0	81.8
C6	N1	C7	HC71	181.3	201.8
C6	N1	C7	HC72	290.7	321.9
C6	N1	C9	HC91	179.9	289.0
C6	N1	C9	HC92	305.3	49.0
C6	N1	C9	HC93	54.8	169.0
HC61	C6	C5	HC51	312.2	180.0
HC61	C6	C5	HC52	202.8	300.0
C5	C6	HC61	N1	230.2	120.0
C5	C6	HC61	HC62	115.1	240.0
N1	C6	HC61	HC62	244.9	120.0
HC61	C6	N1	C7	22.8	310.0
HC61	C6	N1	C9	145.9	196.2
HC62	C6	C5	HC51	61.7	60.0
HC62	C6	C5	HC52	312.2	180.0
C5	C6	HC62	N1	129.8	240.0
C5	C6	HC62	HC61	245.0	120.0
N1	C6	HC62	HC61	115.2	240.0
HC62	C6	N1	C7	273.3	70.0
HC62	C6	N1	C9	36.4	316.2
C7	N1	C6	HC61	22.8	310.0
C7	N1	C6	HC62	273.3	70.0
C6	N1	C7	C9	123.3	246.2
C7	N1	C9	HC91	302.4	175.2
C7	N1	C9	HC92	67.8	295.2
C7	N1	C9	HC93	177.3	55.2
C8	C7	N1	HC71	234.7	240.0
C8	C7	N1	HC72	125.3	120.0
N1	C7	C8	O2	86.7	63.1
N1	C7	C8	HC81	212.0	183.1
N1	C7	C8	HC82	321.5	303.0
HC71	C7	N1	HC72	250.6	240.0
C9	N1	C6	HC61	145.9	196.2
C9	N1	C6	HC62	36.4	316.2
C6	N1	C9	C7	237.5	113.8
C9	N1	C7	C8	292.7	195.6
C9	N1	C7	HC71	58.0	315.6
C9	N1	C7	HC72	167.4	75.7
HC91	C9	N1	HC92	234.6	240.0
HC91	C9	N1	HC93	125.2	120.0
HC92	C9	N1	HC93	250.5	239.9
C8	C7	N1	C9	292.7	195.6
N1	C7	C8	HC71	125.3	120.0
N1	C7	C8	HC72	234.8	240.1
HC71	C7	C8	HC72	109.5	120.0
O2	C8	C7	HC81	234.7	240.0
O2	C8	C7	HC82	125.3	120.0
C7	C8	O2	P1	78.8	180.0
HC81	C8	C7	HC82	250.5	240.0
HC71	C7	N1	C9	58.0	315.6
N1	C7	HC71	C8	229.5	240.0
N1	C7	HC71	HC72	114.7	120.0
C8	C7	HC71	HC72	245.2	240.0
HC71	C7	C8	O2	321.4	303.1
HC71	C7	C8	HC81	86.7	63.1
HC71	C7	C8	HC82	196.2	183.0
HC72	C7	N1	C9	167.4	75.7
N1	C7	HC72	C8	130.5	120.0
N1	C7	HC72	HC71	245.3	240.0
C8	C7	HC72	HC71	114.8	120.0
HC72	C7	C8	O2	212.0	183.0
HC72	C7	C8	HC81	337.2	303.0
HC72	C7	C8	HC82	86.7	63.0
O1	P1	O2	C8	164.3	295.0
O2	C8	C7	HC71	321.4	303.1
O2	C8	C7	HC72	212.0	183.0
C7	C8	O2	HC81	125.2	120.0
C7	C8	O2	HC82	234.8	240.0
HC81	C8	O2	HC82	109.6	120.0
C8	O2	P1	O3	283.4	175.0
C8	O2	P1	O4	42.7	55.0
HC81	C8	C7	HC71	86.7	63.1
HC81	C8	C7	HC72	337.2	303.0
C7	C8	HC81	O2	235.9	240.0
C7	C8	HC81	HC82	117.9	120.0
O2	C8	HC81	HC82	242.0	240.0
HC81	C8	O2	P1	313.6	60.0
HC82	C8	C7	HC71	196.2	183.0
HC82	C8	C7	HC72	86.7	63.0
C7	C8	HC82	O2	124.1	120.0
C7	C8	HC82	HC81	242.1	240.0
O2	C8	HC82	HC81	118.0	120.0
HC82	C8	O2	P1	204.1	300.0
N1	C9	HC91	HC92	125.3	120.0
N1	C9	HC91	HC93	234.8	240.0
HC92	C9	HC91	HC93	109.5	120.0
N1	C9	HC92	HC91	234.9	240.0
N1	C9	HC92	HC93	117.5	120.1
HC91	C9	HC92	HC93	242.6	240.1
N1	C9	HC93	HC91	125.0	120.0
N1	C9	HC93	HC92	242.5	239.9
HC91	C9	HC93	HC92	117.5	120.0
O1	P1	O2	O3	240.8	120.0
O1	P1	O2	O4	121.6	240.0
P1	O2	C8	HC81	313.6	60.0
P1	O2	C8	HC82	204.1	300.0
O3	P1	O2	O4	240.7	119.9
O2	P1	O3	P2	179.1	200.0
O1	P1	O3	O2	118.2	240.0
O1	P1	O3	O4	237.0	120.0
O2	P1	O3	O4	118.8	240.1
P1	O3	P2	O5	68.4	80.0
P1	O3	P2	O6	307.8	200.0
P1	O3	P2	O7	188.3	320.1
O1	P1	O4	O2	239.9	120.0
O1	P1	O4	O3	122.5	240.0
O2	P1	O4	O3	242.6	120.0
O4	P1	O3	P2	60.3	320.0
P2	O3	P1	O4	60.3	320.0
O5	P2	O3	O6	120.7	240.0
O5	P2	O3	O7	240.2	120.0
O6	P2	O3	O7	119.5	240.0
O3	P2	O5	O6	239.3	120.0
O3	P2	O5	O7	118.1	240.1
O6	P2	O5	O7	238.8	120.1
O3	P2	O6	O5	120.9	240.0
O3	P2	O6	O7	242.2	120.0
O5	P2	O6	O7	121.3	240.0
O3	P2	O7	O5	240.2	119.9
O3	P2	O7	O6	119.2	240.0
O5	P2	O7	O6	239.0	120.0