PDB Chemical Component 39V

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 39V

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C37 C31 1.569 1.506
C37 C38 1.499 1.530
C37 C39 1.502 1.530
C31 O32 1.310 1.208
C31 C29 1.542 1.507
C30 C29 1.535 1.530
C30 C41 1.386 1.507
C39 O40 1.409 1.428
C29 N28 1.453 1.466
C42 C41 1.373 1.383
C42 C43 1.368 1.382
C41 C46 1.366 1.382
C43 C44 1.369 1.383
C46 C45 1.373 1.383
N28 C26 1.328 1.348
C44 C45 1.369 1.382
C26 O27 1.201 1.213
C26 C16 1.488 1.507
C63 C62 1.370 1.367
C63 C67 1.289 1.396
C16 C17 1.526 1.531
C16 N15 1.451 1.465
C62 C61 1.365 1.389
C17 C66 1.513 1.507
C67 C66 1.301 1.465
C67 C68 1.300 1.407
N15 C13 1.320 1.348
C66 C65 1.301 1.342
C61 C60 1.349 1.377
C13 O14 1.203 1.213
C13 C11 1.498 1.507
C68 C60 1.300 1.391
C68 N69 1.299 1.377
C65 N69 1.307 1.368
C12 C11 1.498 1.530
C11 N1 1.459 1.465
N1 C2 1.306 1.348
O3 C2 1.197 1.217
C2 C50 1.325 1.464
C50 C51 1.361 1.511
C50 C58 1.312 1.345
C51 C52 1.380 1.509
C59 C58 1.512 1.506
C58 C57 1.310 1.469
C52 C57 1.304 1.399
C52 C53 1.317 1.375
C57 C56 1.317 1.401
C53 C54 1.375 1.385
C56 C55 1.371 1.379
C54 C55 1.357 1.384
N1 H1 1.000 0.970
C17 H2 1.100 1.090
C17 H3 1.100 1.090
C59 H4 1.100 1.091
C59 H5 1.100 1.090
C59 H6 1.100 1.090
C56 H7 1.080 1.079
C55 H8 1.080 1.081
C54 H9 1.080 1.080
C53 H10 1.080 1.080
C51 H11 1.100 1.089
C51 H12 1.100 1.090
C11 H13 1.100 1.090
C12 H14 1.100 1.091
C12 H15 1.100 1.090
C12 H16 1.100 1.090
N15 H17 1.000 0.970
C16 H18 1.100 1.089
C63 H19 1.081 1.080
C62 H20 1.079 1.080
C61 H22 1.079 1.080
C60 H23 1.080 1.080
C65 H24 1.080 1.081
N28 H25 1.000 0.969
C29 H26 1.100 1.090
C30 H27 1.100 1.090
C30 H28 1.100 1.089
C46 H29 1.080 1.081
C45 H30 1.080 1.080
C44 H31 1.080 1.080
C43 H32 1.080 1.080
C42 H33 1.080 1.080
C37 H36 1.100 1.090
C38 H37 1.100 1.090
C38 H38 1.100 1.090
C38 H39 1.100 1.090
C39 H40 1.100 1.090
C39 H41 1.100 1.090
O40 H42 0.950 0.967
N69 H34 1.000 0.970

Bond Angles for 39V

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C38 C37 C39 107.3 109.5
C38 C37 H36 109.4 109.4
C37 C38 H37 109.5 109.5
C37 C38 H38 109.5 109.5
C37 C38 H39 109.5 109.4
C37 C39 O40 110.9 109.5
C39 C37 H36 109.4 109.4
C37 C39 H40 109.1 109.4
C37 C39 H41 109.1 109.5
C31 C29 H26 110.4 109.5
C30 C29 H26 110.5 109.5
C30 C41 C46 123.5 120.0
C41 C30 H27 106.9 109.5
C41 C30 H28 107.0 109.5
O40 C39 H40 109.1 109.5
O40 C39 H41 109.1 109.5
C39 O40 H42 109.5 114.0
C29 N28 H25 117.0 120.0
C42 C41 C46 118.9 120.0
C42 C43 C44 118.9 120.0
C42 C43 H32 120.5 120.0
C43 C42 H33 119.1 120.0
C41 C46 C45 120.0 120.0
C41 C46 H29 120.0 120.0
C43 C44 C45 120.0 120.0
C43 C44 H31 120.0 120.0
C44 C43 H32 120.6 120.0
C46 C45 H30 119.7 120.0
C44 C45 H30 119.7 120.0
C45 C44 H31 120.0 120.0
C26 C16 C17 111.0 109.5
C26 C16 H18 108.9 109.5
C63 C62 C61 120.2 120.5
C62 C63 H19 120.5 120.1
C63 C62 H20 119.9 119.7
C16 C17 C66 106.6 109.5
C16 C17 H2 110.2 109.4
C16 C17 H3 110.2 109.4
C17 C16 H18 108.4 109.5
C16 N15 H17 119.4 120.0
C61 C62 H20 119.9 119.8
C62 C61 H22 121.4 119.6
C17 C66 C65 123.0 126.5
C66 C17 H2 110.2 109.5
C66 C17 H3 110.2 109.5
C67 C68 C60 123.3 119.4
C67 C68 N69 108.2 107.1
C66 C65 N69 107.3 110.0
C66 C65 H24 126.4 125.0
C61 C60 H23 120.2 120.1
C13 C11 H13 106.5 109.5
C68 C60 H23 120.2 120.1
C68 N69 H34 125.9 125.1
N69 C65 H24 126.4 125.0
C65 N69 H34 125.9 125.0
C12 C11 H13 106.5 109.4
C11 N1 H1 117.1 120.0
C50 C51 H11 110.6 110.4
C50 C51 H12 110.5 110.1
C59 C58 C57 122.3 124.6
C58 C59 H4 109.5 109.5
C58 C59 H5 109.5 109.5
C58 C59 H6 109.5 109.5
C58 C57 C56 131.6 131.7
C52 C53 H10 118.5 120.0
C57 C56 C55 122.6 119.8
C57 C56 H7 118.7 120.1
C53 C54 H9 121.2 120.0
C55 C56 H7 118.7 120.1
C56 C55 H8 121.5 119.7
C54 C55 H8 121.5 119.9
H2 C17 H3 109.5 109.5
H4 C59 H5 109.4 109.4
H4 C59 H6 109.5 109.4
H5 C59 H6 109.5 109.5
H11 C51 H12 109.5 110.2
H14 C12 H15 109.5 109.5
H14 C12 H16 109.5 109.5
H15 C12 H16 109.4 109.5
H27 C30 H28 109.5 109.5
H37 C38 H38 109.4 109.5
H37 C38 H39 109.4 109.5
H38 C38 H39 109.5 109.5
H40 C39 H41 109.5 109.4

Torsion Angles for 39V

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C37 C31 C29 H26 312.7 45.0
C38 C37 C39 O40 272.2 65.0
C39 C37 C38 H36 241.4 240.1
C38 C37 C39 H40 32.4 185.0
C38 C37 C39 H41 152.0 304.9
H37 C38 C37 H38 240.0 240.0
H37 C38 C37 H39 120.0 120.0
H38 C38 C37 H39 240.0 240.0
C38 C37 C39 H36 118.6 119.9
C39 C37 C38 H37 301.5 180.0
C39 C37 C38 H38 61.6 300.0
C39 C37 C38 H39 181.6 60.1
O40 C39 C37 H40 239.8 240.0
O40 C39 C37 H41 120.2 120.0
C37 C39 O40 H42 312.8 180.0
H40 C39 C37 H41 240.4 240.1
O32 C31 C29 H26 190.3 225.0
C30 C29 C31 H26 238.5 240.0
C31 C29 N28 H25 52.2 95.0
C31 C29 C30 H26 121.4 120.0
C30 C29 N28 H25 295.1 335.0
C41 C30 C29 H26 42.9 55.0
C42 C41 C30 C46 179.6 180.3
C30 C41 C46 C45 179.4 179.8
C30 C41 C46 H29 359.4 0.0
H27 C30 C41 H28 117.2 120.0
O40 C39 C37 H36 153.6 305.0
C37 C39 O40 H40 120.2 120.0
C37 C39 O40 H41 239.8 240.0
H40 C39 O40 H41 119.6 120.0
C30 C41 C42 C46 180.4 179.7
C42 C41 C30 H27 57.4 150.3
C42 C41 C30 H28 300.2 30.2
C42 C41 C46 C45 359.8 359.5
C42 C41 C46 H29 179.8 179.8
C43 C42 C41 C46 359.7 0.3
C42 C43 C44 C45 359.8 360.0
C42 C43 C44 H31 179.8 180.0
C44 C43 C42 H32 180.0 180.0
C46 C41 C30 H27 237.8 330.0
C46 C41 C30 H28 120.6 210.0
C41 C46 C45 H30 180.5 180.3
C42 C43 C44 H32 180.0 180.0
C44 C43 C42 H33 180.5 180.0
C43 C44 C45 H30 179.7 180.0
C45 C44 C43 H31 180.0 180.0
C41 C46 C45 H29 180.0 180.2
C44 C45 C46 H30 180.0 180.2
C46 C45 C44 H31 179.7 179.8
N28 C26 C16 H18 34.7 60.0
C41 C46 C45 C44 0.5 0.4
C43 C44 C45 H31 180.0 180.0
C45 C44 C43 H32 179.8 180.0
C46 C45 C44 H30 180.0 179.8
O27 C26 C16 C17 94.4 120.0
O27 C26 C16 H18 213.7 240.0
C26 C16 C17 C66 165.0 174.7
C26 C16 C17 H2 284.6 294.7
C26 C16 C17 H3 45.5 54.7
C17 C16 C26 H18 240.8 240.0
C26 C16 N15 H17 44.6 92.2
C61 C62 C63 H20 180.0 180.1
C63 C62 C61 H22 179.6 180.0
C63 C67 C68 C60 359.6 359.9
C26 C16 C17 H18 119.6 120.0
C17 C16 N15 H17 282.6 332.2
C16 C17 C66 C65 80.0 267.8
C66 C17 C16 H2 240.5 240.0
C66 C17 C16 H3 119.5 120.0
H2 C17 C16 H3 239.1 240.0
C61 C62 C63 H19 180.1 180.1
C63 C62 C61 H20 180.0 179.9
C62 C61 C60 H23 180.3 180.1
C16 C17 C66 H2 119.6 120.0
C16 C17 C66 H3 240.5 240.0
C66 C17 C16 H18 45.5 54.7
C17 C66 C65 N69 181.6 180.0
C17 C66 C65 H24 1.6 359.9
H2 C17 C66 H3 120.9 120.1
C67 C66 C17 H2 143.3 327.4
C67 C66 C17 H3 22.4 207.4
C67 C66 C65 N69 359.2 0.3
C67 C66 C65 H24 179.2 180.2
C67 C68 C60 H23 180.1 180.0
C67 C68 N69 H34 179.8 179.8
N15 C13 C11 H13 253.4 325.2
C65 C66 C17 H2 320.5 147.8
C65 C66 C17 H3 199.6 27.7
N69 C65 C66 H24 180.0 180.1
C66 C65 N69 H34 180.6 180.0
C63 C62 C61 C60 359.7 359.9
C68 C60 C61 H23 180.0 180.0
O14 C13 C11 H13 69.6 145.2
C12 C11 C13 H13 116.3 120.0
C13 C11 N1 H1 88.7 335.0
C67 C68 C60 N69 180.6 180.2
C61 C60 C68 H23 180.0 180.0
C60 C68 N69 H34 0.3 0.0
C67 C68 N69 C60 179.5 179.8
C68 N69 C65 H24 180.6 179.9
C65 N69 C68 H34 180.0 180.1
C67 C68 N69 C65 359.8 360.0
C66 C65 N69 H24 180.0 179.9
C68 N69 C65 H34 180.0 179.9
C13 C11 C12 H13 243.7 240.0
C12 C11 N1 H1 216.2 95.0
C2 C50 C51 H11 299.8 60.9
C2 C50 C51 H12 61.2 298.9
H11 C51 C50 H12 238.6 122.0
C50 C58 C59 H4 180.0 179.7
C50 C58 C59 H5 300.0 299.7
C50 C58 C59 H6 60.0 59.7
C51 C52 C53 H10 358.8 0.0
C59 C58 C57 C56 356.1 0.0
H4 C59 C58 H5 240.0 240.0
H4 C59 C58 H6 120.0 120.0
H5 C59 C58 H6 240.0 240.0
C57 C58 C59 H4 1.9 0.0
C57 C58 C59 H5 121.9 120.0
C57 C58 C59 H6 241.9 240.1
C58 C57 C56 C55 180.3 180.0
C58 C57 C56 H7 0.3 360.0
C52 C57 C56 H7 179.0 180.0
C52 C53 C54 H9 179.8 180.0
C55 C56 C57 H7 180.0 180.0
C57 C56 C55 H8 180.3 180.0
C53 C54 C55 H8 180.3 180.0
C57 C56 C55 H7 180.0 180.0
C54 C55 C56 H8 180.0 180.0
C54 C55 C56 H7 180.3 180.0
C56 C55 C54 H8 180.0 180.0
C16 C17 H2 C66 242.7 240.0
C16 C17 H2 H3 121.3 119.9
H2 C17 C16 H18 165.0 174.7
H2 C17 C66 C65 320.5 147.8
C66 C17 H2 H3 238.7 239.9
C16 C17 H3 C66 117.3 120.0
C16 C17 H3 H2 238.6 240.1
H3 C17 C16 H18 285.9 294.7
H3 C17 C66 C65 199.6 27.7
C66 C17 H3 H2 121.3 120.1
H4 C59 C58 C57 1.9 0.0
C58 C59 H4 H5 120.0 120.1
C58 C59 H4 H6 240.0 240.0
H5 C59 H4 H6 120.0 119.9
H5 C59 C58 C57 121.9 120.0
C58 C59 H5 H4 240.0 239.9
C58 C59 H5 H6 120.0 120.0
H4 C59 H5 H6 240.0 240.1
H6 C59 C58 C57 241.9 240.1
C58 C59 H6 H4 120.0 120.0
C58 C59 H6 H5 240.0 240.0
H4 C59 H6 H5 120.0 119.9
C57 C56 H7 C55 180.0 180.0
H7 C56 C55 H8 0.3 360.0
H8 C55 C56 H7 0.3 360.0
H9 C54 C55 H8 0.3 0.0
H10 C53 C54 H9 359.8 360.0
C50 C51 H11 H12 122.0 238.1
C50 C51 H12 H11 238.0 122.1
H13 C11 N1 H1 332.3 215.0
H14 C12 C11 H13 296.3 295.3
H15 C12 H14 H16 120.0 120.0
H15 C12 C11 H13 56.3 55.3
H14 C12 H15 H16 240.0 240.0
H16 C12 C11 H13 176.2 175.4
H14 C12 H16 H15 120.0 120.0
C26 C16 H18 C17 239.1 240.0
H18 C16 C17 C66 45.5 54.7
H18 C16 C17 H2 165.0 174.7
H18 C16 C17 H3 285.9 294.7
H18 C16 N15 H17 162.4 212.2
H19 C63 C62 C61 180.1 180.1
H19 C63 C62 H20 0.1 0.0
C63 C62 H20 C61 180.0 180.1
H20 C62 C63 H19 0.1 0.0
H20 C62 C61 H22 359.6 0.1
H22 C61 C62 H20 359.6 0.1
H22 C61 C60 H23 0.3 359.9
C66 C65 H24 N69 180.0 180.1
H24 C65 N69 H34 0.6 0.1
H26 C29 N28 H25 176.3 215.0
H27 C30 C29 H26 164.3 174.9
H27 C30 C41 C46 237.8 330.0
C41 C30 H27 H28 244.5 239.9
H28 C30 C29 H26 281.5 294.9
H28 C30 C41 C46 120.6 210.0
C41 C30 H28 H27 115.5 120.0
C41 C46 H29 C45 180.0 179.8
H29 C46 C45 H30 0.5 0.0
H30 C45 C44 H31 359.7 360.0
C43 C44 H31 C45 180.0 180.0
H31 C44 C43 H32 359.8 360.0
H31 C44 C45 H30 359.7 360.0
C42 C43 H32 C44 180.0 180.0
H32 C43 C42 H33 0.5 0.0
H32 C43 C44 C45 179.8 180.0
H32 C43 C44 H31 359.8 360.0
H33 C42 C41 C46 179.7 180.2
H33 C42 C43 C44 180.5 180.0
H33 C42 C43 H32 0.5 0.0
C38 C37 H36 C39 242.7 240.1
H36 C37 C38 H37 60.2 300.0
H36 C37 C38 H38 180.2 60.0
H36 C37 C38 H39 300.2 180.0
H36 C37 C39 O40 153.6 305.0
H36 C37 C39 H40 273.8 65.1
H36 C37 C39 H41 33.4 185.0
H37 C38 C37 C39 301.5 180.0
H37 C38 C37 H36 60.2 300.0
C37 C38 H37 H38 120.0 120.0
C37 C38 H37 H39 240.0 240.0
H38 C38 H37 H39 120.0 120.0
H38 C38 C37 C39 61.6 300.0
H38 C38 C37 H36 180.2 60.0
C37 C38 H38 H37 240.0 240.0
C37 C38 H38 H39 120.0 120.0
H37 C38 H38 H39 240.1 240.0
H39 C38 C37 C39 181.6 60.1
H39 C38 C37 H36 300.2 180.0
C37 C38 H39 H37 120.0 120.0
C37 C38 H39 H38 240.0 239.9
H37 C38 H39 H38 120.0 120.0
C37 C39 H40 O40 238.7 240.0
H40 C39 C37 H36 273.8 65.1
C37 C39 H40 H41 119.4 120.0
O40 C39 H40 H41 240.6 240.0
H40 C39 O40 H42 192.6 60.0
C37 C39 H41 O40 121.3 120.0
H41 C39 C37 H36 33.4 185.0
C37 C39 H41 H40 240.7 240.1
O40 C39 H41 H40 119.4 120.0
H41 C39 O40 H42 73.0 300.0
H42 O40 C39 H40 192.6 60.0
H42 O40 C39 H41 73.0 300.0
H34 N69 C65 H24 0.6 0.1