PDB Chemical Component 38O

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 38O

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C4	C3	1.536	1.531
C4	N5	1.488	1.469
C3	N2	1.472	1.470
F22	C21	1.351	1.351
N2	C1	1.470	1.469
N2	C7	1.472	1.470
N5	C6	1.487	1.470
N5	C8	1.431	1.400
N19	C18	1.383	1.374
C6	C7	1.536	1.530
C9	C8	1.403	1.382
C9	C10	1.389	1.399
C8	C16	1.416	1.393
C21	C23	1.386	1.380
C21	C20	1.417	1.400
N11	C10	1.372	1.356
N11	C12	1.377	1.314
C10	C14	1.399	1.405
C23	C24	1.392	1.387
C18	C20	1.488	1.467
C18	C17	1.428	1.398
C16	C15	1.377	1.379
C20	C26	1.418	1.407
C12	C17	1.498	1.472
C12	N13	1.330	1.370
C14	C15	1.402	1.387
C14	N13	1.360	1.385
C17	C28	1.430	1.414
C24	C25	1.385	1.379
C26	C25	1.399	1.391
C26	N27	1.380	1.381
C28	N27	1.346	1.343
C28	O29	1.212	1.220
C1	H1	1.100	1.089
C1	H2	1.100	1.090
C1	H3	1.100	1.090
C3	H4	1.100	1.090
C3	H5	1.100	1.090
C4	H6	1.101	1.091
C4	H7	1.101	1.090
C6	H8	1.100	1.090
C6	H9	1.100	1.090
C7	H10	1.100	1.090
C7	H11	1.100	1.090
N13	H12	1.000	0.969
C15	H13	1.080	1.080
C16	H14	1.080	1.080
C23	H15	1.080	1.080
C24	H16	1.080	1.080
C9	H18	1.080	1.081
N19	H20	1.000	0.970
N19	H21	1.000	0.970
C25	H22	1.080	1.080
N27	H23	1.000	0.970

Bond Angles for 38O

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C4	C3	N2	107.7	109.3
C4	C3	H4	109.9	109.5
C4	C3	H5	109.9	109.5
C4	N5	C6	111.9	110.9
C4	N5	C8	124.1	111.0
N5	C4	H6	109.8	109.5
N5	C4	H7	109.8	109.5
C3	N2	C7	111.0	110.9
N2	C3	H4	109.9	109.5
N2	C3	H5	109.9	109.5
N2	C1	H1	109.5	109.5
N2	C1	H2	109.5	109.4
N2	C1	H3	109.5	109.5
N2	C7	H10	109.2	109.5
N2	C7	H11	109.2	109.4
N5	C6	H8	109.3	109.5
N5	C6	H9	109.3	109.5
N19	C18	C20	117.6	120.9
C7	C6	H8	109.3	109.5
C7	C6	H9	109.3	109.5
C6	C7	H10	109.2	109.5
C6	C7	H11	109.2	109.5
C9	C10	C14	121.4	119.5
C10	C9	H18	119.4	120.2
C8	C16	C15	122.1	120.4
C8	C16	H14	118.9	119.8
C23	C21	C20	120.5	119.5
C21	C23	C24	120.5	120.3
C21	C23	H15	119.8	119.9
C18	C20	C21	122.7	121.0
C21	C20	C26	118.2	120.0
N11	C10	C14	106.3	107.3
C23	C24	C25	120.3	120.7
C24	C23	H15	119.7	119.8
C23	C24	H16	119.8	119.7
C18	C20	C26	119.2	119.1
C18	C17	C28	117.1	119.6
C16	C15	H13	119.7	120.0
C20	C26	C25	120.4	119.4
C20	C26	N27	119.5	120.0
N13	C12	C17	125.7	125.1
C12	C17	C28	118.9	120.2
C12	N13	H12	124.9	126.4
C14	C15	H13	119.7	120.0
C14	N13	H12	124.9	126.4
C17	C28	N27	123.4	121.7
C17	C28	O29	120.0	119.2
C25	C24	H16	119.8	119.6
C24	C25	H22	119.9	120.0
C26	C25	H22	120.0	119.9
C26	N27	H23	119.0	119.2
C28	N27	H23	119.0	119.2
H1	C1	H2	109.4	109.5
H1	C1	H3	109.5	109.5
H2	C1	H3	109.5	109.4
H4	C3	H5	109.5	109.5
H6	C4	H7	109.5	109.5
H8	C6	H9	109.5	109.5
H10	C7	H11	109.4	109.6
H20	N19	H21	109.4	120.0

Torsion Angles for 38O

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C4	C3	N2	C7	296.8	300.7
N2	C3	C4	H4	240.3	240.0
N2	C3	C4	H5	119.7	120.0
H4	C3	C4	H5	239.5	240.0
N5	C4	C3	N2	62.5	58.4
N5	C4	C3	H4	182.2	178.4
N5	C4	C3	H5	302.7	298.5
C4	N5	C6	H8	175.2	299.3
C4	N5	C6	H9	295.0	179.3
H6	C4	N5	H7	120.4	120.1
C4	C3	N2	H4	119.7	120.0
C4	C3	N2	H5	240.3	240.0
C3	N2	C1	H1	180.0	60.0
C3	N2	C1	H2	300.0	180.0
C3	N2	C1	H3	60.0	299.9
C3	N2	C7	H10	178.9	299.4
C3	N2	C7	H11	298.5	179.3
H4	C3	N2	H5	120.5	120.0
F22	C21	C23	H15	359.9	359.9
F22	C21	C20	C26	180.1	180.1
H1	C1	N2	H2	240.0	240.0
H1	C1	N2	H3	120.0	120.1
H2	C1	N2	H3	240.0	240.1
C7	N2	C3	H4	177.1	180.7
C7	N2	C3	H5	56.6	60.7
C7	N2	C1	H1	55.2	296.3
C7	N2	C1	H2	175.2	56.3
C7	N2	C1	H3	295.2	176.2
N2	C7	C6	H8	186.8	61.6
N2	C7	C6	H9	67.0	181.6
C6	C7	N2	H10	239.8	120.0
C6	C7	N2	H11	120.2	240.1
H10	C7	N2	H11	240.3	120.1
C4	N5	C6	C8	182.0	236.2
C6	N5	C4	H6	180.3	180.7
C6	N5	C4	H7	59.9	60.6
C7	C6	N5	H8	239.9	120.0
C7	C6	N5	H9	120.1	240.1
N5	C6	C7	H10	186.7	61.5
N5	C6	C7	H11	67.1	181.7
H8	C6	N5	H9	240.2	120.0
C4	N5	C8	C6	177.8	123.8
C8	N5	C4	H6	2.3	56.9
C8	N5	C4	H7	241.9	296.8
C8	N5	C6	H8	353.2	63.2
C8	N5	C6	H9	113.0	303.2
N5	C8	C16	H14	0.3	360.0
N19	C18	C20	C21	358.7	360.0
N19	C18	C20	C26	178.4	180.0
N19	C18	C17	C28	181.2	180.3
C4	N5	C6	C7	55.0	59.4
C3	N2	C7	C6	58.7	59.4
N2	C7	C6	H10	120.2	240.0
N2	C7	C6	H11	239.8	119.9
N5	C6	C7	H8	120.1	240.0
N5	C6	C7	H9	239.9	120.0
H8	C6	C7	H9	119.8	240.0
H10	C7	C6	H11	119.6	239.8
C9	C8	C16	H14	179.6	179.8
N11	C10	C9	C14	179.9	179.9
C4	N5	C8	C16	159.5	360.0
C8	C16	C15	H13	180.8	180.0
C18	C20	C21	C23	179.7	180.0
C23	C21	C20	C26	0.1	0.0
C21	C23	C24	C25	0.1	0.1
C24	C23	C21	H15	180.0	180.0
C21	C23	C24	H16	180.1	180.0
C20	C21	C23	C24	359.9	360.0
C20	C21	C23	H15	179.9	180.0
C18	C20	C21	C26	179.7	180.0
C21	C20	C26	C25	359.9	359.9
C21	C20	C26	N27	180.4	180.0
C9	C10	N11	C14	180.1	180.1
N11	C10	C9	H18	0.4	359.9
N11	C12	C17	C28	199.3	185.9
N11	C12	N13	H12	179.7	180.0
C14	C10	C9	H18	180.5	180.1
C10	C14	C15	H13	179.4	180.0
C10	C14	N13	H12	180.1	180.0
C24	C23	C21	C20	359.9	360.0
C21	C23	C24	H15	180.0	180.0
C25	C24	C23	H16	180.0	180.1
C23	C24	C25	H22	179.9	180.0
C23	C21	C20	C18	179.7	180.0
C21	C20	C18	C26	180.3	180.0
C20	C18	C17	C28	0.4	0.2
C18	C20	C26	C25	180.2	179.9
C18	C20	C26	N27	0.7	0.0
C12	C17	C18	C28	179.1	179.8
C18	C17	C28	N27	0.3	359.5
C18	C17	C28	O29	179.9	179.8
C8	C16	C15	H14	180.0	179.9
C14	C15	C16	H13	180.0	180.5
C18	C20	C26	C21	180.3	180.0
C20	C26	C25	H22	180.1	180.0
C20	C26	N27	H23	179.9	180.0
C18	C17	C12	C28	180.9	180.2
C17	C12	N13	H12	359.1	359.9
C12	C17	C28	N27	181.1	179.7
C12	C17	C28	O29	0.8	0.0
N13	C12	C17	C28	19.9	6.0
C14	N13	C12	H12	180.0	180.1
C16	C15	C14	H13	180.0	179.5
C15	C14	N13	H12	0.2	359.7
C12	N13	C14	H12	180.0	179.9
C17	C28	N27	H23	179.6	180.3
C25	C24	C23	H15	180.1	180.1
C23	C24	C25	H16	180.0	179.9
C20	C26	C25	C24	0.1	0.1
C26	C25	C24	H22	180.0	179.8
C20	C26	C25	N27	180.5	180.1
C26	C25	C24	H16	179.9	179.9
C24	C25	C26	H22	180.0	180.2
C20	C26	N27	C25	179.5	179.9
C17	C28	N27	C26	359.6	0.6
N27	C26	C25	H22	359.6	359.9
C28	N27	C26	H23	180.0	179.7
C17	C28	N27	O29	179.7	180.3
C26	N27	C28	H23	180.0	180.3
C17	C28	O29	N27	180.3	179.7
N2	C1	H1	H2	120.0	120.0
N2	C1	H1	H3	240.0	239.9
H2	C1	H1	H3	120.0	120.0
N2	C1	H2	H1	240.0	240.0
N2	C1	H2	H3	120.0	119.9
H1	C1	H2	H3	240.0	240.0
N2	C1	H3	H1	120.0	120.1
N2	C1	H3	H2	240.0	240.1
H1	C1	H3	H2	120.0	120.0
C4	C3	H4	N2	241.6	240.1
C4	C3	H4	H5	120.8	120.1
H4	C3	N2	C7	177.1	180.7
N2	C3	H4	H5	239.2	240.0
C4	C3	H5	N2	118.4	119.9
C4	C3	H5	H4	239.2	239.9
H5	C3	N2	C7	56.6	60.7
N2	C3	H5	H4	120.8	120.0
H6	C4	C3	N2	182.3	178.4
H6	C4	C3	H4	302.0	298.4
H6	C4	C3	H5	62.5	58.4
H6	C4	N5	C6	180.3	180.7
H6	C4	N5	C8	2.3	56.9
N5	C4	H6	H7	239.4	239.9
H7	C4	C3	N2	302.7	298.4
H7	C4	C3	H4	62.4	58.4
H7	C4	C3	H5	182.9	178.4
H7	C4	N5	C6	59.9	60.6
H7	C4	N5	C8	241.9	296.8
N5	C4	H7	H6	120.6	120.1
N5	C6	H8	H9	119.7	240.0
C7	C6	H8	H9	240.3	120.0
H8	C6	C7	H10	66.6	181.5
H8	C6	C7	H11	307.0	301.7
N5	C6	H9	H8	240.3	120.0
C7	C6	H9	H8	119.8	239.9
H9	C6	C7	H10	306.8	301.6
H9	C6	C7	H11	187.1	61.7
N2	C7	H10	H11	119.5	240.0
H10	C7	C6	H8	66.6	181.5
H10	C7	C6	H9	306.8	301.6
C6	C7	H10	H11	240.5	120.1
N2	C7	H11	H10	240.5	120.0
H11	C7	C6	H8	307.0	301.7
H11	C7	C6	H9	187.1	61.7
C6	C7	H11	H10	119.5	239.9
H12	N13	C12	C17	359.1	359.9
C8	C16	H14	C15	180.0	180.1
H14	C16	C15	H13	0.8	0.0
H15	C23	C21	C20	179.9	180.0
C21	C23	H15	C24	180.0	180.0
H15	C23	C24	C25	180.1	180.1
H15	C23	C24	H16	0.1	0.0
C23	C24	H16	C25	180.0	180.1
H16	C24	C23	H15	0.1	0.0
H16	C24	C25	H22	359.9	0.1
H18	C9	C10	C14	180.5	180.1
H20	N19	C18	C20	180.0	20.5
H21	N19	C18	C20	300.0	200.7
H22	C25	C24	H16	359.9	0.1