PDB Chemical Component 38E
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 38E
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O |
C9 |
1.309 |
1.218 |
| F |
C |
1.365 |
1.351 |
| C5 |
C |
1.365 |
1.378 |
| C5 |
C4 |
1.405 |
1.402 |
| C6 |
C4 |
1.510 |
1.464 |
| C6 |
C7 |
1.476 |
1.378 |
| C9 |
C7 |
1.461 |
1.473 |
| C9 |
N1 |
1.318 |
1.351 |
| C |
C1 |
1.475 |
1.392 |
| C4 |
C3 |
1.398 |
1.402 |
| C7 |
N |
1.360 |
1.368 |
| C10 |
N1 |
1.477 |
1.464 |
| N1 |
C8 |
1.337 |
1.367 |
| C1 |
O1 |
1.315 |
1.358 |
| C1 |
C2 |
1.460 |
1.392 |
| C3 |
C2 |
1.387 |
1.379 |
| N |
C8 |
1.381 |
1.297 |
| C8 |
C11 |
1.506 |
1.507 |
| C2 |
F1 |
1.370 |
1.351 |
| O1 |
H1 |
0.950 |
0.967 |
| C3 |
H2 |
1.080 |
1.079 |
| C5 |
H3 |
1.080 |
1.080 |
| C6 |
H4 |
1.080 |
1.080 |
| C10 |
H5 |
1.100 |
1.091 |
| C10 |
H6 |
1.100 |
1.091 |
| C10 |
H7 |
1.100 |
1.090 |
| C11 |
H8 |
1.100 |
1.090 |
| C11 |
H9 |
1.099 |
1.091 |
| C11 |
H10 |
1.100 |
1.090 |
Bond Angles for 38E
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O |
C9 |
N1 |
125.1 |
127.4 |
| C |
C5 |
H3 |
119.0 |
120.1 |
| C6 |
C7 |
N |
126.3 |
127.1 |
| C7 |
C6 |
H4 |
117.6 |
119.9 |
| C9 |
C7 |
N |
106.4 |
105.8 |
| C9 |
N1 |
C8 |
108.2 |
108.4 |
| C4 |
C3 |
H2 |
119.7 |
120.1 |
| C7 |
N |
C8 |
105.8 |
109.3 |
| C10 |
N1 |
C8 |
127.3 |
125.8 |
| N1 |
C8 |
C11 |
121.3 |
124.3 |
| C1 |
O1 |
H1 |
109.5 |
114.0 |
| N |
C8 |
C11 |
126.9 |
124.4 |
| C8 |
C11 |
H8 |
109.5 |
109.5 |
| C8 |
C11 |
H9 |
109.5 |
109.4 |
| C8 |
C11 |
H10 |
109.5 |
109.5 |
| H5 |
C10 |
H6 |
109.5 |
109.4 |
| H5 |
C10 |
H7 |
109.5 |
109.5 |
| H6 |
C10 |
H7 |
109.5 |
109.5 |
| H8 |
C11 |
H9 |
109.5 |
109.5 |
| H8 |
C11 |
H10 |
109.5 |
109.5 |
| H9 |
C11 |
H10 |
109.5 |
109.4 |
Torsion Angles for 38E
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O |
C9 |
C7 |
N |
182.6 |
180.3 |
| O |
C9 |
N1 |
C8 |
177.7 |
179.9 |
| F |
C |
C5 |
H3 |
0.2 |
0.3 |
| C5 |
C4 |
C3 |
H2 |
180.3 |
180.0 |
| C6 |
C4 |
C3 |
H2 |
0.6 |
359.9 |
| C9 |
C7 |
C6 |
N |
182.4 |
180.3 |
| C6 |
C7 |
N |
C8 |
182.4 |
179.9 |
| C6 |
C7 |
C9 |
N |
178.0 |
179.7 |
| C9 |
C7 |
C6 |
H4 |
358.8 |
5.5 |
| C9 |
C7 |
N |
C8 |
0.4 |
359.7 |
| N1 |
C9 |
C7 |
N |
358.9 |
0.2 |
| C10 |
N1 |
C9 |
C8 |
178.9 |
180.1 |
| C9 |
N1 |
C8 |
C11 |
177.6 |
180.0 |
| C |
C1 |
O1 |
H1 |
180.0 |
270.0 |
| N |
C7 |
C6 |
H4 |
176.5 |
185.2 |
| C7 |
N |
C8 |
C11 |
181.7 |
180.2 |
| C9 |
N1 |
C10 |
C8 |
181.3 |
179.9 |
| C10 |
N1 |
C8 |
C11 |
358.7 |
359.9 |
| C7 |
N |
C8 |
N1 |
0.4 |
0.3 |
| N |
C8 |
N1 |
C11 |
181.3 |
179.8 |
| N1 |
C8 |
C11 |
H8 |
181.5 |
90.1 |
| N1 |
C8 |
C11 |
H9 |
301.5 |
210.1 |
| N1 |
C8 |
C11 |
H10 |
61.5 |
330.0 |
| N1 |
C8 |
N |
C11 |
178.7 |
180.2 |
| N |
C8 |
C11 |
H8 |
360.0 |
270.3 |
| N |
C8 |
C11 |
H9 |
120.0 |
30.3 |
| N |
C8 |
C11 |
H10 |
240.0 |
150.2 |
| H8 |
C11 |
C8 |
H9 |
240.0 |
240.0 |
| H8 |
C11 |
C8 |
H10 |
120.0 |
120.1 |
| H9 |
C11 |
C8 |
H10 |
240.0 |
240.1 |
| H4 |
C6 |
C7 |
N |
176.5 |
185.2 |
| H5 |
C10 |
N1 |
C8 |
358.7 |
180.1 |
| H6 |
C10 |
H5 |
H7 |
120.0 |
120.0 |
| H6 |
C10 |
N1 |
C8 |
118.7 |
300.0 |
| H5 |
C10 |
H6 |
H7 |
240.0 |
240.0 |
| H7 |
C10 |
N1 |
C8 |
238.7 |
60.1 |
| H5 |
C10 |
H7 |
H6 |
120.0 |
119.9 |
| C8 |
C11 |
H8 |
H9 |
120.0 |
120.0 |
| C8 |
C11 |
H8 |
H10 |
240.0 |
240.0 |
| H9 |
C11 |
H8 |
H10 |
120.0 |
120.0 |
| C8 |
C11 |
H9 |
H8 |
240.0 |
240.0 |
| C8 |
C11 |
H9 |
H10 |
120.0 |
120.0 |
| H8 |
C11 |
H9 |
H10 |
240.0 |
239.9 |
| C8 |
C11 |
H10 |
H8 |
120.0 |
120.0 |
| C8 |
C11 |
H10 |
H9 |
240.0 |
240.0 |
| H8 |
C11 |
H10 |
H9 |
120.0 |
120.0 |