PDB Chemical Component 379

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 379

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
P11	C3	1.815	1.824
P11	C11	1.818	1.823
P11	O12	1.504	1.609
P11	O13	1.448	1.480
C1	C3	1.520	1.529
C1	C6	1.512	1.530
C3	N10	1.467	1.470
C6	C8	1.533	1.506
C8	C01	1.381	1.382
C8	C21	1.389	1.387
C11	C13	1.521	1.530
C13	C15	1.505	1.507
C13	C16	1.501	1.531
C15	O23	1.260	1.208
C15	O24	1.234	1.343
C16	C17	1.515	1.507
C01	N18	1.361	1.320
C17	C36	1.388	1.382
C17	C40	1.395	1.382
N18	C19	1.372	1.319
C19	C20	1.399	1.382
C20	C21	1.364	1.386
C36	C37	1.384	1.382
C37	C38	1.391	1.382
C38	C39	1.388	1.382
C39	C40	1.394	1.383
C1	H1	1.100	1.090
C1	H2	1.100	1.090
C3	H12	1.100	1.089
C6	H6	1.100	1.090
C6	H7	1.100	1.090
N10	H11	1.000	1.009
N10	H13	1.000	1.009
C11	H16	1.100	1.090
C11	H17	1.099	1.090
O12	H4	0.950	0.966
C13	H18	1.100	1.090
C16	H19	1.100	1.090
C16	H20	1.099	1.089
C01	H8	1.080	1.080
C19	H10	1.080	1.080
C20	H14	1.080	1.080
C21	H15	1.080	1.080
O24	H9	0.950	0.967
C36	H21	1.080	1.081
C37	H22	1.080	1.080
C38	H25	1.080	1.080
C39	H23	1.080	1.081
C40	H24	1.080	1.080

Bond Angles for 379

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C3	P11	C11	112.9	109.4
C3	P11	O12	109.4	109.5
C3	P11	O13	109.3	109.4
P11	C3	C1	111.9	109.5
P11	C3	N10	108.4	109.5
P11	C3	H12	106.0	109.5
C11	P11	O12	107.9	109.5
C11	P11	O13	104.6	109.5
P11	C11	C13	115.8	109.4
P11	C11	H16	107.9	109.5
P11	C11	H17	107.9	109.5
O12	P11	O13	112.8	109.5
P11	O12	H4	109.5	114.0
C3	C1	C6	114.3	109.5
C1	C3	N10	111.3	109.5
C3	C1	H1	108.3	109.5
C3	C1	H2	108.2	109.5
C1	C3	H12	109.2	109.5
C1	C6	C8	110.8	109.5
C6	C1	H1	108.3	109.4
C6	C1	H2	108.3	109.5
C1	C6	H6	109.1	109.4
C1	C6	H7	109.1	109.4
N10	C3	H12	109.9	109.5
C3	N10	H11	109.5	111.0
C3	N10	H13	109.5	111.0
C6	C8	C01	119.5	120.4
C6	C8	C21	121.5	120.4
C8	C6	H6	109.1	109.5
C8	C6	H7	109.1	109.5
C01	C8	C21	119.0	119.2
C8	C01	N18	120.4	120.7
C8	C01	H8	119.8	119.6
C8	C21	C20	121.3	118.4
C8	C21	H15	119.4	120.8
C11	C13	C15	111.3	109.4
C11	C13	C16	109.7	109.4
C13	C11	H16	107.9	109.5
C13	C11	H17	107.9	109.5
C11	C13	H18	111.0	109.5
C15	C13	C16	102.0	109.5
C13	C15	O23	122.6	120.0
C13	C15	O24	117.8	120.0
C15	C13	H18	111.2	109.5
C13	C16	C17	113.2	109.4
C16	C13	H18	111.3	109.5
C13	C16	H19	108.5	109.5
C13	C16	H20	108.5	109.5
O23	C15	O24	119.6	120.0
C15	O24	H9	109.5	117.0
C16	C17	C36	118.5	120.0
C16	C17	C40	121.9	120.0
C17	C16	H19	108.5	109.4
C17	C16	H20	108.5	109.5
C01	N18	C19	120.3	121.7
N18	C01	H8	119.8	119.6
C36	C17	C40	119.6	120.0
C17	C36	C37	120.5	120.0
C17	C36	H21	119.8	120.0
C17	C40	C39	120.0	120.0
C17	C40	H24	120.0	120.0
N18	C19	C20	120.4	120.8
N18	C19	H10	119.8	119.6
C19	C20	C21	118.5	119.2
C20	C19	H10	119.8	119.6
C19	C20	H14	120.7	120.4
C21	C20	H14	120.8	120.4
C20	C21	H15	119.3	120.8
C36	C37	C38	120.0	120.0
C37	C36	H21	119.7	120.0
C36	C37	H22	120.0	120.0
C37	C38	C39	120.1	120.0
C38	C37	H22	120.0	120.0
C37	C38	H25	120.0	120.0
C38	C39	C40	119.9	120.0
C39	C38	H25	120.0	120.0
C38	C39	H23	120.0	120.0
C40	C39	H23	120.1	120.0
C39	C40	H24	120.0	120.0
H1	C1	H2	109.5	109.4
H6	C6	H7	109.5	109.5
H11	N10	H13	109.5	111.1
H16	C11	H17	109.5	109.4
H19	C16	H20	109.5	109.5

Torsion Angles for 379

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C11	P11	C3	O12	120.1	120.0
C11	P11	C3	O13	244.1	240.0
C3	P11	C11	C13	98.4	175.0
C3	P11	C11	H16	219.3	295.0
C3	P11	C11	H17	337.5	55.0
O12	P11	C3	O13	123.9	120.0
C3	P11	O12	H4	238.1	60.0
P11	C3	C1	C6	168.8	60.0
C1	C3	P11	N10	123.2	120.0
P11	C3	C1	H1	289.6	180.0
P11	C3	C1	H2	48.1	300.0
C1	C3	P11	H12	241.1	240.0
N10	C3	P11	H12	117.9	120.0
P11	C3	N10	H11	180.0	59.9
P11	C3	N10	H13	300.0	183.9
C3	P11	C11	O12	239.0	240.0
C3	P11	C11	O13	118.7	119.9
C11	P11	C3	C1	299.3	180.0
C11	P11	C3	N10	176.1	60.0
C11	P11	C3	H12	58.2	300.0
O12	P11	C11	O13	239.7	239.9
C11	P11	O12	H4	114.9	300.0
P11	C11	C13	C15	258.0	285.0
P11	C11	C13	C16	145.8	165.0
C13	C11	P11	H16	239.1	240.0
C13	C11	P11	H17	120.9	120.0
P11	C11	C13	H18	22.5	45.0
H16	C11	P11	H17	241.8	240.0
C3	P11	O12	C11	123.2	120.0
C3	P11	O12	O13	238.1	240.0
O12	P11	C3	C1	179.2	60.0
O12	P11	C3	N10	56.0	300.0
O12	P11	C3	H12	298.1	180.0
C11	P11	O12	O13	114.9	120.1
O12	P11	C11	C13	219.4	295.0
O12	P11	C11	H16	340.3	55.0
O12	P11	C11	H17	98.5	175.0
C3	P11	O13	C11	238.9	240.1
C3	P11	O13	O12	121.9	120.0
O13	P11	C3	C1	55.2	300.0
O13	P11	C3	N10	292.1	180.0
O13	P11	C3	H12	174.1	60.0
C11	P11	O13	O12	243.1	239.9
O13	P11	C11	C13	339.6	55.1
O13	P11	C11	H16	100.6	175.1
O13	P11	C11	H17	218.7	295.0
O13	P11	O12	H4	0.0	180.0
C1	C3	P11	C11	299.3	180.0
C1	C3	P11	O12	179.2	60.0
C1	C3	P11	O13	55.2	300.0
P11	C3	C1	N10	238.5	240.0
P11	C3	C1	H12	117.0	120.0
C3	C1	C6	C8	179.1	180.0
C6	C1	C3	H1	239.3	240.0
C6	C1	C3	H2	120.7	120.0
C3	C1	C6	H6	299.3	300.0
C3	C1	C6	H7	58.9	59.9
N10	C3	C1	H12	238.5	240.0
C1	C3	N10	H11	56.5	300.0
C1	C3	N10	H13	176.5	64.0
H1	C1	C3	H2	241.4	240.0
C6	C1	C3	N10	290.3	180.0
C3	C1	C6	H1	120.7	120.0
C3	C1	C6	H2	239.3	239.9
C6	C1	C3	H12	51.8	300.0
C1	C6	C8	C01	207.2	89.9
C1	C6	C8	C21	28.3	269.7
C8	C6	C1	H6	239.8	240.0
C8	C6	C1	H7	120.2	120.0
H1	C1	C6	H2	118.6	119.9
H6	C6	C1	H7	240.4	240.1
N10	C3	P11	C11	176.1	60.0
N10	C3	P11	O12	56.0	300.0
N10	C3	P11	O13	292.1	180.0
P11	C3	N10	C1	123.5	120.0
P11	C3	N10	H12	244.6	240.0
N10	C3	C1	C6	290.3	180.0
N10	C3	C1	H1	51.1	300.0
N10	C3	C1	H2	169.6	60.0
C1	C3	N10	H12	121.1	120.0
H11	N10	C3	H13	240.0	236.0
C8	C6	C1	H1	58.4	60.0
C8	C6	C1	H2	299.8	300.1
C1	C6	C8	H6	120.2	120.0
C1	C6	C8	H7	239.8	240.0
C01	C8	C6	C21	179.0	180.2
C6	C8	C01	N18	180.2	180.0
C6	C8	C01	H8	0.2	0.0
C6	C8	C21	C20	179.2	179.8
C6	C8	C21	H15	359.2	0.0
H6	C6	C8	H7	119.6	120.0
C6	C8	C01	C21	181.0	179.8
C01	C8	C6	H6	87.0	330.0
C01	C8	C6	H7	327.4	209.9
C01	C8	C21	C20	0.2	359.5
C01	C8	C21	H15	180.2	179.8
C8	C01	N18	C19	0.0	0.0
N18	C01	C8	H8	180.0	180.0
C6	C8	C21	C01	179.0	180.2
C21	C8	C6	H6	268.0	149.7
C21	C8	C6	H7	148.4	29.7
C21	C8	C01	N18	359.2	0.2
C21	C8	C01	H8	179.2	180.3
C19	C20	C21	C8	1.1	0.5
C8	C21	C20	H14	181.1	180.2
C20	C21	C8	H15	180.0	179.7
C13	C11	P11	O12	219.4	295.0
C13	C11	P11	O13	339.6	55.1
P11	C11	C13	H16	120.9	120.0
P11	C11	C13	H17	239.1	240.0
C15	C13	C11	C16	112.1	119.9
C11	C13	C15	O23	144.7	0.0
C11	C13	C15	O24	325.6	180.0
C15	C13	C11	H18	235.5	239.9
C11	C13	C16	C17	263.2	185.0
C16	C13	C11	H18	123.4	120.0
C11	C13	C16	H19	23.8	304.9
C11	C13	C16	H20	142.7	65.0
H16	C11	C13	H17	118.2	120.0
C11	C13	C15	C16	243.1	240.1
C15	C13	C11	H16	137.0	165.0
C15	C13	C11	H17	18.9	44.9
C11	C13	C15	H18	124.4	120.1
C15	C13	C16	C17	145.2	65.1
C16	C13	C15	H18	241.2	240.0
C15	C13	C16	H19	265.7	185.0
C15	C13	C16	H20	24.6	305.1
O23	C15	C13	O24	179.1	180.0
C13	C15	O24	H9	179.2	180.0
C11	C13	C16	C15	118.1	119.9
C16	C13	C11	H16	24.9	45.0
C16	C13	C11	H17	266.7	285.0
C11	C13	C16	H18	236.8	240.0
C16	C13	C15	O23	261.5	120.0
C16	C13	C15	O24	82.4	299.9
C15	C13	C16	H18	118.7	120.0
C13	C16	C17	C36	107.0	90.0
C13	C16	C17	C40	285.5	269.6
C17	C16	C13	H19	239.5	240.1
C17	C16	C13	H20	120.5	120.0
H19	C16	C13	H20	241.1	239.9
O23	C15	C13	C16	261.5	120.0
C13	C15	O23	O24	180.9	180.0
O23	C15	C13	H18	20.3	240.0
O23	C15	O24	H9	0.0	360.0
O24	C15	C13	C16	82.4	299.9
C13	C15	O24	O23	179.1	180.0
O24	C15	C13	H18	201.2	60.0
C17	C16	C13	H18	26.5	305.0
C13	C16	C17	H19	120.5	119.9
C13	C16	C17	H20	239.4	240.0
C36	C17	C16	C40	181.5	180.4
C16	C17	C36	C37	178.8	179.9
C16	C17	C36	H21	358.8	359.9
C16	C17	C40	C39	181.1	179.8
C16	C17	C40	H24	1.1	0.1
H19	C16	C17	H20	118.9	120.1
N18	C01	C8	C21	359.2	0.2
C8	C01	N18	H8	180.0	180.0
C01	N18	C19	C20	1.3	0.0
C01	N18	C19	H10	181.3	179.9
C16	C17	C36	C40	178.5	179.6
C36	C17	C16	H19	346.4	330.1
C36	C17	C16	H20	227.5	210.0
C36	C17	C40	C39	359.6	359.4
C36	C17	C40	H24	179.6	179.7
C17	C36	C37	C38	0.0	360.0
C37	C36	C17	H21	180.0	180.0
C17	C36	C37	H22	180.0	179.9
C16	C17	C40	C36	181.5	180.4
C40	C17	C16	H19	164.9	149.7
C40	C17	C16	H20	46.0	29.6
C40	C17	C36	C37	0.3	0.3
C40	C17	C36	H21	180.3	180.3
C38	C39	C40	C17	0.2	0.5
C17	C40	C39	H23	180.3	180.3
C39	C40	C17	H24	180.0	179.7
C19	N18	C01	H8	180.0	180.0
N18	C19	C20	C21	358.1	359.7
C20	C19	N18	H10	180.0	180.1
N18	C19	C20	H14	178.1	180.0
C8	C21	C20	C19	1.1	0.5
N18	C19	C20	H10	180.0	179.9
C21	C20	C19	H14	180.0	179.7
C19	C20	C21	H15	181.1	180.2
C8	C21	C20	H15	180.0	180.3
C21	C20	C19	H10	178.1	179.8
C19	C20	C21	H14	180.0	180.3
C37	C36	C17	C40	0.3	0.3
C17	C36	C37	H21	180.0	180.0
C36	C37	C38	C39	359.8	360.0
C38	C37	C36	H22	180.0	180.1
C36	C37	C38	H25	179.8	180.0
C38	C37	C36	H21	180.0	180.0
C36	C37	C38	H22	180.0	179.9
C37	C38	C39	C40	0.1	359.8
C39	C38	C37	H25	180.0	180.0
C37	C38	C39	H23	180.0	180.0
C17	C40	C39	C38	0.2	0.5
C39	C38	C37	H22	179.8	180.1
C37	C38	C39	H25	180.0	180.0
C40	C39	C38	H23	180.0	179.8
C38	C39	C40	H24	180.3	180.2
C17	C40	C39	H24	180.0	180.3
C40	C39	C38	H25	180.0	179.8
C38	C39	C40	H23	180.0	180.2
C3	C1	H1	C6	235.6	240.0
H1	C1	C3	N10	51.1	300.0
C3	C1	H1	H2	117.8	120.0
H1	C1	C3	H12	172.6	60.0
H1	C1	C6	C8	58.4	60.0
C6	C1	H1	H2	242.2	240.0
H1	C1	C6	H6	178.6	180.0
H1	C1	C6	H7	298.2	299.9
C3	C1	H2	C6	124.4	120.1
H2	C1	C3	N10	169.6	60.0
C3	C1	H2	H1	242.2	240.0
H2	C1	C3	H12	291.1	180.0
H2	C1	C6	C8	299.8	300.1
C6	C1	H2	H1	117.8	119.9
H2	C1	C6	H6	60.0	60.1
H2	C1	C6	H7	179.6	180.0
H12	C3	P11	C11	58.2	300.0
H12	C3	P11	O12	298.1	180.0
H12	C3	P11	O13	174.1	60.0
P11	C3	H12	C1	239.3	240.0
P11	C3	H12	N10	117.0	120.0
H12	C3	C1	C6	51.8	300.0
C1	C3	H12	N10	237.6	240.0
H12	C3	C1	H1	172.6	60.0
H12	C3	C1	H2	291.1	180.0
H12	C3	N10	H11	295.4	180.0
H12	C3	N10	H13	55.4	304.0
C1	C6	H6	C8	238.7	240.0
H6	C6	C1	H1	178.6	180.0
H6	C6	C1	H2	60.0	60.1
C1	C6	H6	H7	119.4	119.9
H6	C6	C8	C01	87.0	330.0
H6	C6	C8	C21	268.0	149.7
C8	C6	H6	H7	240.6	239.9
C1	C6	H7	C8	121.2	120.0
H7	C6	C1	H1	298.2	299.9
H7	C6	C1	H2	179.6	180.0
C1	C6	H7	H6	240.6	240.1
H7	C6	C8	C01	327.4	209.9
H7	C6	C8	C21	148.4	29.7
C8	C6	H7	H6	119.4	120.0
H11	N10	C3	H12	295.4	180.0
C3	N10	H11	H13	120.0	124.0
H13	N10	C3	H12	55.4	304.0
C3	N10	H13	H11	240.0	236.0
H16	C11	P11	O12	340.3	55.0
H16	C11	P11	O13	100.6	175.1
P11	C11	H16	C13	234.3	240.0
P11	C11	H16	H17	117.1	120.0
H16	C11	C13	C15	137.0	165.0
H16	C11	C13	C16	24.9	45.0
C13	C11	H16	H17	242.9	240.0
H16	C11	C13	H18	261.5	285.0
H17	C11	P11	O12	98.5	175.0
H17	C11	P11	O13	218.7	295.0
P11	C11	H17	C13	125.7	120.0
P11	C11	H17	H16	242.9	240.0
H17	C11	C13	C15	18.9	44.9
H17	C11	C13	C16	266.7	285.0
C13	C11	H17	H16	117.1	120.1
H17	C11	C13	H18	143.4	165.0
H4	O12	P11	O13	0.0	180.0
C11	C13	H18	C15	235.5	240.0
C11	C13	H18	C16	122.4	120.0
H18	C13	C11	H16	261.5	285.0
H18	C13	C11	H17	143.4	165.0
C15	C13	H18	C16	247.0	240.0
H18	C13	C15	O23	20.3	240.0
H18	C13	C15	O24	201.2	60.0
H18	C13	C16	C17	26.5	305.0
H18	C13	C16	H19	147.0	65.0
H18	C13	C16	H20	265.9	185.0
C13	C16	H19	C17	236.6	240.1
H19	C16	C13	H18	147.0	65.0
C13	C16	H19	H20	118.3	120.0
H19	C16	C17	C36	346.4	330.1
H19	C16	C17	C40	164.9	149.7
C17	C16	H19	H20	241.7	239.9
C13	C16	H20	C17	123.4	119.9
H20	C16	C13	H18	265.9	185.0
C13	C16	H20	H19	241.7	240.0
H20	C16	C17	C36	227.5	210.0
H20	C16	C17	C40	46.0	29.6
C17	C16	H20	H19	118.3	120.0
H8	C01	C8	C21	179.2	180.3
C8	C01	H8	N18	180.0	180.0
H8	C01	N18	C19	180.0	180.0
N18	C19	H10	C20	180.0	180.1
H10	C19	C20	C21	178.1	179.8
H10	C19	C20	H14	358.1	0.1
C19	C20	H14	C21	180.0	179.7
H14	C20	C19	H10	358.1	0.1
H14	C20	C21	H15	1.1	360.0
C8	C21	H15	C20	180.0	179.7
H15	C21	C20	H14	1.1	360.0
H21	C36	C17	C40	180.3	180.3
C17	C36	H21	C37	180.0	180.0
H21	C36	C37	C38	180.0	180.0
H21	C36	C37	H22	360.0	359.9
C36	C37	H22	C38	180.0	180.1
H22	C37	C36	H21	360.0	359.9
H22	C37	C38	C39	179.8	180.1
H22	C37	C38	H25	359.8	0.0
C37	C38	H25	C39	180.0	180.0
H25	C38	C37	H22	359.8	0.0
H25	C38	C39	C40	180.0	179.8
H25	C38	C39	H23	0.0	0.0
C38	C39	H23	C40	180.0	179.8
H23	C39	C38	H25	0.0	0.0
H23	C39	C40	H24	0.3	0.0
C17	C40	H24	C39	180.0	179.7
H24	C40	C39	H23	0.3	0.0