PDB Chemical Component 35E
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 35E
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C02 |
O01 |
1.410 |
1.429 |
C02 |
C03 |
1.561 |
1.531 |
C08 |
C03 |
1.484 |
1.531 |
C08 |
C07 |
1.494 |
1.530 |
C03 |
C04 |
1.468 |
1.531 |
C07 |
N06 |
1.459 |
1.469 |
C04 |
C05 |
1.487 |
1.530 |
N06 |
C05 |
1.498 |
1.469 |
N06 |
C09 |
1.465 |
1.391 |
N10 |
C09 |
1.345 |
1.324 |
N10 |
C11 |
1.373 |
1.325 |
C09 |
C14 |
1.446 |
1.401 |
C11 |
C12 |
1.421 |
1.380 |
C14 |
O15 |
1.403 |
1.358 |
C14 |
N13 |
1.360 |
1.323 |
O15 |
C16 |
1.392 |
1.429 |
C12 |
N13 |
1.357 |
1.324 |
C16 |
C17 |
1.488 |
1.539 |
C16 |
C19 |
1.467 |
1.539 |
C17 |
N18 |
1.472 |
1.479 |
C19 |
N18 |
1.486 |
1.479 |
N18 |
C20 |
1.443 |
1.387 |
N29 |
C20 |
1.376 |
1.317 |
N29 |
C28 |
1.402 |
1.338 |
C20 |
C21 |
1.389 |
1.403 |
C27 |
C28 |
1.445 |
1.404 |
C27 |
C26 |
1.388 |
1.362 |
C28 |
C23 |
1.381 |
1.416 |
C21 |
C22 |
1.422 |
1.362 |
C26 |
C25 |
1.423 |
1.393 |
C23 |
C22 |
1.437 |
1.410 |
C23 |
C24 |
1.428 |
1.403 |
C25 |
C24 |
1.406 |
1.363 |
O01 |
H1 |
0.950 |
0.967 |
C02 |
H2 |
1.099 |
1.091 |
C02 |
H3 |
1.100 |
1.090 |
C03 |
H4 |
1.100 |
1.090 |
C04 |
H5 |
1.100 |
1.091 |
C04 |
H6 |
1.100 |
1.090 |
C05 |
H7 |
1.100 |
1.089 |
C05 |
H8 |
1.100 |
1.090 |
C07 |
H9 |
1.101 |
1.090 |
C07 |
H10 |
1.100 |
1.089 |
C08 |
H11 |
1.100 |
1.090 |
C08 |
H12 |
1.100 |
1.090 |
C11 |
H13 |
1.080 |
1.080 |
C12 |
H14 |
1.080 |
1.079 |
C16 |
H15 |
1.100 |
1.090 |
C17 |
H16 |
1.100 |
1.089 |
C17 |
H17 |
1.100 |
1.090 |
C19 |
H18 |
1.100 |
1.090 |
C19 |
H19 |
1.100 |
1.090 |
C21 |
H20 |
1.080 |
1.080 |
C22 |
H21 |
1.080 |
1.080 |
C24 |
H22 |
1.080 |
1.080 |
C25 |
H23 |
1.080 |
1.080 |
C26 |
H24 |
1.080 |
1.081 |
C27 |
H25 |
1.080 |
1.080 |
Bond Angles for 35E
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C02 |
O01 |
H1 |
109.5 |
114.0 |
C02 |
C03 |
C04 |
112.3 |
109.5 |
C03 |
C02 |
H2 |
107.1 |
109.4 |
C03 |
C02 |
H3 |
107.2 |
109.5 |
C02 |
C03 |
H4 |
107.4 |
109.5 |
C08 |
C03 |
H4 |
108.3 |
109.6 |
C08 |
C07 |
H9 |
107.5 |
109.4 |
C08 |
C07 |
H10 |
107.5 |
109.5 |
C03 |
C04 |
C05 |
111.3 |
109.3 |
C04 |
C03 |
H4 |
108.6 |
109.5 |
C03 |
C04 |
H5 |
109.0 |
109.5 |
C03 |
C04 |
H6 |
109.0 |
109.6 |
C07 |
N06 |
C09 |
126.6 |
111.0 |
C05 |
C04 |
H5 |
109.0 |
109.5 |
C05 |
C04 |
H6 |
109.0 |
109.5 |
C04 |
C05 |
H7 |
107.6 |
109.5 |
C04 |
C05 |
H8 |
107.6 |
109.5 |
N06 |
C05 |
H7 |
107.7 |
109.4 |
N06 |
C05 |
H8 |
107.6 |
109.4 |
N06 |
C09 |
C14 |
123.2 |
120.1 |
N10 |
C09 |
C14 |
119.8 |
119.7 |
N10 |
C11 |
C12 |
118.6 |
120.2 |
N10 |
C11 |
H13 |
120.7 |
119.9 |
C09 |
C14 |
O15 |
120.8 |
120.1 |
C09 |
C14 |
N13 |
118.6 |
119.8 |
C11 |
C12 |
N13 |
120.5 |
120.3 |
C12 |
C11 |
H13 |
120.7 |
119.9 |
C11 |
C12 |
H14 |
119.8 |
119.8 |
C14 |
O15 |
C16 |
113.1 |
117.0 |
O15 |
C16 |
C17 |
111.3 |
113.7 |
O15 |
C16 |
C19 |
109.0 |
113.7 |
O15 |
C16 |
H15 |
115.8 |
112.9 |
N13 |
C12 |
H14 |
119.8 |
119.9 |
C17 |
C16 |
C19 |
89.4 |
86.4 |
C16 |
C17 |
N18 |
90.5 |
86.2 |
C17 |
C16 |
H15 |
114.0 |
113.7 |
C16 |
C17 |
H16 |
114.0 |
113.8 |
C16 |
C17 |
H17 |
114.0 |
113.7 |
C16 |
C19 |
N18 |
90.8 |
86.2 |
C19 |
C16 |
H15 |
114.4 |
113.9 |
C16 |
C19 |
H18 |
113.9 |
113.8 |
C16 |
C19 |
H19 |
113.9 |
113.8 |
C17 |
N18 |
C20 |
123.5 |
111.0 |
N18 |
C17 |
H16 |
114.0 |
113.8 |
N18 |
C17 |
H17 |
114.0 |
113.7 |
C19 |
N18 |
C20 |
131.6 |
111.0 |
N18 |
C20 |
C21 |
118.6 |
119.3 |
C20 |
C21 |
C22 |
119.4 |
119.9 |
C20 |
C21 |
H20 |
120.3 |
120.0 |
C28 |
C27 |
H25 |
119.9 |
120.2 |
C27 |
C26 |
H24 |
120.0 |
119.5 |
C22 |
C21 |
H20 |
120.3 |
120.1 |
C21 |
C22 |
H21 |
120.2 |
120.8 |
C26 |
C25 |
H23 |
120.0 |
119.6 |
C23 |
C22 |
H21 |
120.2 |
120.9 |
C23 |
C24 |
H22 |
120.1 |
120.2 |
C25 |
C24 |
H22 |
120.1 |
120.1 |
H2 |
C02 |
H3 |
109.5 |
109.5 |
H5 |
C04 |
H6 |
109.5 |
109.5 |
H7 |
C05 |
H8 |
109.5 |
109.5 |
H9 |
C07 |
H10 |
109.5 |
109.5 |
H11 |
C08 |
H12 |
109.5 |
109.5 |
H16 |
C17 |
H17 |
109.5 |
113.0 |
H18 |
C19 |
H19 |
109.4 |
113.0 |
Torsion Angles for 35E
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C03 |
C02 |
O01 |
H1 |
180.0 |
180.0 |
C08 |
C03 |
C02 |
H4 |
118.3 |
120.2 |
C02 |
C03 |
C04 |
C05 |
175.4 |
182.4 |
C04 |
C03 |
C02 |
H4 |
240.7 |
239.9 |
C02 |
C03 |
C04 |
H5 |
295.6 |
302.4 |
C02 |
C03 |
C04 |
H6 |
55.1 |
62.5 |
H2 |
C02 |
C03 |
H3 |
117.4 |
120.0 |
C08 |
C03 |
C02 |
H2 |
85.2 |
305.3 |
C08 |
C03 |
C02 |
H3 |
327.8 |
185.4 |
C02 |
C03 |
C08 |
H4 |
242.3 |
239.9 |
C04 |
C03 |
C08 |
H4 |
118.0 |
120.0 |
C08 |
C03 |
C04 |
H5 |
59.2 |
62.3 |
C08 |
C03 |
C04 |
H6 |
178.6 |
182.4 |
C07 |
C08 |
C03 |
H4 |
302.0 |
297.7 |
C08 |
C07 |
N06 |
C09 |
195.1 |
185.9 |
H9 |
C07 |
C08 |
H10 |
242.2 |
120.0 |
C04 |
C03 |
C02 |
H2 |
207.6 |
65.0 |
C04 |
C03 |
C02 |
H3 |
90.2 |
305.1 |
C02 |
C03 |
C04 |
H4 |
118.6 |
120.0 |
C08 |
C03 |
C04 |
H4 |
242.2 |
239.9 |
C05 |
C04 |
C03 |
H5 |
239.7 |
240.1 |
C05 |
C04 |
C03 |
H6 |
120.3 |
120.0 |
C03 |
C04 |
C05 |
H7 |
166.8 |
179.2 |
C03 |
C04 |
C05 |
H8 |
284.7 |
299.1 |
H5 |
C04 |
C03 |
H6 |
240.5 |
239.9 |
C07 |
N06 |
C05 |
H7 |
210.8 |
178.3 |
C07 |
N06 |
C05 |
H8 |
92.9 |
58.3 |
C07 |
N06 |
C09 |
C14 |
198.7 |
55.8 |
C05 |
C04 |
C03 |
H4 |
56.7 |
62.4 |
C03 |
C04 |
C05 |
H5 |
120.3 |
119.9 |
C03 |
C04 |
C05 |
H6 |
239.7 |
240.0 |
N06 |
C05 |
C04 |
H7 |
238.9 |
240.0 |
N06 |
C05 |
C04 |
H8 |
121.0 |
120.0 |
H5 |
C04 |
C05 |
H6 |
119.4 |
120.1 |
H7 |
C05 |
C04 |
H8 |
242.1 |
240.0 |
N06 |
C05 |
C04 |
H5 |
285.4 |
299.2 |
N06 |
C05 |
C04 |
H6 |
166.0 |
179.2 |
C04 |
C05 |
N06 |
H7 |
121.1 |
120.0 |
C04 |
C05 |
N06 |
H8 |
239.0 |
240.0 |
H7 |
C05 |
N06 |
H8 |
117.9 |
119.9 |
C09 |
N06 |
C05 |
H7 |
41.4 |
54.1 |
C09 |
N06 |
C05 |
H8 |
283.5 |
294.2 |
N10 |
C09 |
N06 |
C14 |
179.5 |
180.3 |
N06 |
C09 |
C14 |
O15 |
359.8 |
0.0 |
N06 |
C09 |
C14 |
N13 |
180.4 |
179.7 |
N06 |
C09 |
N10 |
C14 |
180.5 |
179.7 |
N10 |
C09 |
C14 |
O15 |
180.3 |
179.7 |
N10 |
C09 |
C14 |
N13 |
0.9 |
359.4 |
C11 |
N10 |
C09 |
C14 |
359.3 |
0.3 |
N10 |
C11 |
C12 |
N13 |
0.1 |
360.0 |
C12 |
C11 |
N10 |
H13 |
180.0 |
180.0 |
N10 |
C11 |
C12 |
H14 |
180.1 |
180.0 |
C09 |
C14 |
O15 |
C16 |
149.4 |
180.0 |
N10 |
C11 |
C12 |
H13 |
180.0 |
180.0 |
N13 |
C12 |
C11 |
H14 |
180.0 |
180.0 |
C09 |
C14 |
O15 |
N13 |
180.6 |
179.7 |
C14 |
O15 |
C16 |
C17 |
194.3 |
210.0 |
C14 |
O15 |
C16 |
C19 |
97.2 |
113.3 |
C14 |
O15 |
C16 |
H15 |
326.6 |
341.5 |
C09 |
C14 |
N13 |
O15 |
179.4 |
180.3 |
C14 |
N13 |
C12 |
H14 |
180.2 |
179.7 |
C17 |
C16 |
O15 |
C19 |
97.0 |
96.8 |
O15 |
C16 |
C17 |
N18 |
249.6 |
269.3 |
C17 |
C16 |
O15 |
H15 |
227.7 |
228.5 |
O15 |
C16 |
C17 |
H16 |
6.3 |
23.7 |
O15 |
C16 |
C17 |
H17 |
133.0 |
155.1 |
O15 |
C16 |
C19 |
N18 |
112.6 |
90.7 |
C19 |
C16 |
O15 |
H15 |
130.6 |
131.7 |
O15 |
C16 |
C19 |
H18 |
229.3 |
205.0 |
O15 |
C16 |
C19 |
H19 |
355.9 |
336.3 |
C09 |
C14 |
N13 |
C12 |
359.3 |
0.6 |
N13 |
C12 |
C11 |
H13 |
180.1 |
180.0 |
C11 |
C12 |
N13 |
H14 |
180.0 |
180.0 |
O15 |
C16 |
C17 |
C19 |
249.8 |
245.6 |
O15 |
C16 |
C17 |
H15 |
133.2 |
131.1 |
C17 |
C16 |
C19 |
N18 |
0.2 |
336.3 |
C19 |
C16 |
C17 |
H15 |
243.4 |
245.5 |
C17 |
C16 |
C19 |
H18 |
116.9 |
90.6 |
C17 |
C16 |
C19 |
H19 |
243.5 |
221.9 |
C16 |
C17 |
N18 |
C20 |
218.2 |
222.4 |
N18 |
C17 |
C16 |
H16 |
243.3 |
245.7 |
N18 |
C17 |
C16 |
H17 |
116.7 |
114.3 |
H16 |
C17 |
C16 |
H17 |
233.3 |
228.6 |
O15 |
C16 |
C19 |
C17 |
112.4 |
114.4 |
O15 |
C16 |
C19 |
H15 |
228.6 |
228.7 |
C19 |
C16 |
C17 |
N18 |
359.8 |
23.7 |
C17 |
C16 |
C19 |
H15 |
116.2 |
114.4 |
C19 |
C16 |
C17 |
H16 |
116.5 |
138.0 |
C19 |
C16 |
C17 |
H17 |
243.1 |
269.4 |
C16 |
C19 |
N18 |
C20 |
136.5 |
137.6 |
H18 |
C19 |
C16 |
H19 |
233.5 |
228.7 |
N18 |
C17 |
C16 |
C19 |
359.8 |
23.7 |
N18 |
C17 |
C16 |
H15 |
116.4 |
138.2 |
C16 |
C17 |
N18 |
H16 |
116.7 |
114.4 |
C16 |
C17 |
N18 |
H17 |
243.3 |
245.7 |
C16 |
C19 |
N18 |
C17 |
359.8 |
24.7 |
C19 |
N18 |
C17 |
C20 |
142.0 |
112.9 |
C17 |
N18 |
C20 |
C21 |
155.4 |
180.0 |
H16 |
C17 |
N18 |
H17 |
126.7 |
131.4 |
N18 |
C19 |
C16 |
H15 |
244.0 |
221.9 |
C16 |
C19 |
N18 |
H18 |
116.8 |
114.3 |
C16 |
C19 |
N18 |
H19 |
243.3 |
245.7 |
C17 |
N18 |
C19 |
C20 |
223.3 |
247.0 |
C19 |
N18 |
C17 |
H16 |
243.5 |
221.0 |
C19 |
N18 |
C17 |
H17 |
116.9 |
89.6 |
C19 |
N18 |
C20 |
C21 |
30.8 |
80.6 |
C20 |
N18 |
C17 |
H16 |
101.5 |
108.1 |
C20 |
N18 |
C17 |
H17 |
334.9 |
336.7 |
N18 |
C20 |
C21 |
C22 |
180.9 |
180.0 |
N18 |
C20 |
C21 |
H20 |
0.9 |
360.0 |
N29 |
C20 |
C21 |
H20 |
179.6 |
180.3 |
N29 |
C28 |
C27 |
H25 |
359.9 |
0.3 |
C22 |
C21 |
C20 |
H20 |
180.0 |
180.0 |
C20 |
C21 |
C22 |
H21 |
180.2 |
180.0 |
C28 |
C27 |
C26 |
H24 |
180.0 |
180.0 |
C27 |
C26 |
C25 |
H23 |
179.9 |
180.0 |
C28 |
C23 |
C22 |
H21 |
180.0 |
180.0 |
C28 |
C23 |
C24 |
H22 |
180.2 |
180.1 |
C20 |
C21 |
C22 |
H20 |
180.0 |
180.0 |
C23 |
C22 |
C21 |
H21 |
180.0 |
180.0 |
C26 |
C25 |
C24 |
H22 |
180.0 |
179.9 |
C23 |
C22 |
C21 |
H20 |
180.2 |
180.0 |
C21 |
C22 |
C23 |
H21 |
180.0 |
180.0 |
C24 |
C23 |
C22 |
H21 |
359.9 |
0.0 |
C25 |
C24 |
C23 |
H22 |
180.0 |
179.9 |
C23 |
C24 |
C25 |
H22 |
180.0 |
180.1 |
H2 |
C02 |
O01 |
H1 |
301.3 |
300.0 |
H2 |
C02 |
C03 |
C04 |
207.6 |
65.0 |
C03 |
C02 |
H2 |
H3 |
244.1 |
240.0 |
H2 |
C02 |
C03 |
H4 |
326.9 |
185.1 |
H3 |
C02 |
O01 |
H1 |
58.7 |
60.0 |
H3 |
C02 |
C03 |
C04 |
90.2 |
305.1 |
C03 |
C02 |
H3 |
H2 |
115.9 |
120.0 |
H3 |
C02 |
C03 |
H4 |
209.5 |
65.1 |
C02 |
C03 |
H4 |
C04 |
238.3 |
239.9 |
H4 |
C03 |
C02 |
H2 |
326.9 |
185.1 |
H4 |
C03 |
C02 |
H3 |
209.5 |
65.1 |
H4 |
C03 |
C04 |
C05 |
56.7 |
62.4 |
H4 |
C03 |
C04 |
H5 |
177.0 |
182.3 |
H4 |
C03 |
C04 |
H6 |
296.5 |
302.4 |
C03 |
C04 |
H5 |
C05 |
238.3 |
240.2 |
H5 |
C04 |
C03 |
H4 |
177.0 |
182.3 |
C03 |
C04 |
H5 |
H6 |
119.2 |
120.1 |
C05 |
C04 |
H5 |
H6 |
240.9 |
239.9 |
H5 |
C04 |
C05 |
H7 |
46.5 |
59.2 |
H5 |
C04 |
C05 |
H8 |
164.4 |
179.2 |
C03 |
C04 |
H6 |
C05 |
121.6 |
119.8 |
H6 |
C04 |
C03 |
H4 |
296.5 |
302.4 |
C03 |
C04 |
H6 |
H5 |
240.8 |
239.9 |
C05 |
C04 |
H6 |
H5 |
119.2 |
120.1 |
H6 |
C04 |
C05 |
H7 |
287.1 |
299.2 |
H6 |
C04 |
C05 |
H8 |
45.0 |
59.1 |
H7 |
C05 |
C04 |
H5 |
46.5 |
59.2 |
H7 |
C05 |
C04 |
H6 |
287.1 |
299.2 |
C04 |
C05 |
H7 |
H8 |
116.7 |
120.0 |
N06 |
C05 |
H7 |
H8 |
243.3 |
240.1 |
H8 |
C05 |
C04 |
H5 |
164.4 |
179.2 |
H8 |
C05 |
C04 |
H6 |
45.0 |
59.1 |
C04 |
C05 |
H8 |
H7 |
243.3 |
240.0 |
N06 |
C05 |
H8 |
H7 |
116.7 |
119.9 |
C08 |
C07 |
H9 |
H10 |
116.5 |
240.0 |
H9 |
C07 |
N06 |
C09 |
74.0 |
305.9 |
C08 |
C07 |
H10 |
H9 |
243.5 |
120.0 |
H10 |
C07 |
N06 |
C09 |
316.2 |
65.8 |
H11 |
C08 |
C03 |
H4 |
62.4 |
57.6 |
H11 |
C08 |
C07 |
H9 |
317.4 |
60.9 |
H11 |
C08 |
C07 |
H10 |
75.1 |
300.9 |
H12 |
C08 |
C03 |
H4 |
181.7 |
177.7 |
H12 |
C08 |
C07 |
H9 |
198.1 |
300.8 |
H12 |
C08 |
C07 |
H10 |
315.9 |
180.8 |
N10 |
C11 |
H13 |
C12 |
180.0 |
180.0 |
H13 |
C11 |
C12 |
N13 |
180.1 |
180.0 |
H13 |
C11 |
C12 |
H14 |
0.1 |
359.9 |
C11 |
C12 |
H14 |
N13 |
180.0 |
180.0 |
H14 |
C12 |
C11 |
H13 |
0.1 |
359.9 |
O15 |
C16 |
H15 |
C17 |
228.9 |
228.5 |
O15 |
C16 |
H15 |
C19 |
128.0 |
131.7 |
C17 |
C16 |
H15 |
C19 |
259.1 |
263.2 |
H15 |
C16 |
C17 |
N18 |
116.4 |
138.2 |
H15 |
C16 |
C17 |
H16 |
233.0 |
252.6 |
H15 |
C16 |
C17 |
H17 |
359.7 |
24.0 |
H15 |
C16 |
C19 |
N18 |
244.0 |
221.9 |
H15 |
C16 |
C19 |
H18 |
0.7 |
336.2 |
H15 |
C16 |
C19 |
H19 |
127.3 |
107.5 |
H16 |
C17 |
C16 |
C19 |
116.5 |
138.0 |
C16 |
C17 |
H16 |
N18 |
258.0 |
263.4 |
H16 |
C17 |
C16 |
H15 |
233.0 |
252.6 |
C16 |
C17 |
H16 |
H17 |
129.0 |
131.7 |
H16 |
C17 |
N18 |
C20 |
101.5 |
108.1 |
N18 |
C17 |
H16 |
H17 |
231.0 |
228.3 |
H17 |
C17 |
C16 |
C19 |
243.1 |
269.4 |
C16 |
C17 |
H17 |
N18 |
102.1 |
96.5 |
H17 |
C17 |
C16 |
H15 |
359.7 |
24.0 |
C16 |
C17 |
H17 |
H16 |
231.0 |
228.2 |
H17 |
C17 |
N18 |
C20 |
334.9 |
336.7 |
N18 |
C17 |
H17 |
H16 |
129.0 |
131.7 |
C16 |
C19 |
H18 |
N18 |
257.7 |
263.5 |
H18 |
C19 |
C16 |
H15 |
0.7 |
336.2 |
C16 |
C19 |
H18 |
H19 |
128.9 |
131.7 |
H18 |
C19 |
N18 |
C20 |
19.7 |
23.3 |
C16 |
C19 |
H19 |
N18 |
102.3 |
96.6 |
H19 |
C19 |
C16 |
H15 |
127.3 |
107.5 |
C16 |
C19 |
H19 |
H18 |
231.1 |
228.3 |
H19 |
C19 |
N18 |
C20 |
253.2 |
251.9 |
C20 |
C21 |
H20 |
C22 |
180.0 |
180.0 |
H20 |
C21 |
C22 |
H21 |
0.2 |
360.0 |
H21 |
C22 |
C21 |
H20 |
0.2 |
360.0 |
H23 |
C25 |
C24 |
H22 |
360.0 |
360.0 |
H24 |
C26 |
C25 |
H23 |
359.9 |
360.0 |
H25 |
C27 |
C26 |
H24 |
360.0 |
360.0 |