PDB Chemical Component 35D

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 35D

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C14 C15 1.416 1.393
C14 C13 1.392 1.362
C15 C16 1.430 1.362
C13 C12 1.447 1.405
C16 C17 1.405 1.405
C12 C17 1.408 1.417
C12 N11 1.410 1.338
C17 N18 1.433 1.339
N11 C10 1.375 1.312
N18 C19 1.340 1.317
C10 C19 1.474 1.404
C10 C07 1.540 1.507
C08 C07 1.489 1.531
C08 C09 1.482 1.528
C19 O20 1.427 1.356
C07 C06 1.483 1.531
C09 N04 1.440 1.469
C22 C21 1.463 1.539
C22 N23 1.457 1.480
O20 C21 1.440 1.430
C01 C02 1.466 1.507
C21 C24 1.466 1.540
C06 C05 1.481 1.532
N04 C02 1.440 1.348
N04 C05 1.450 1.468
C02 O03 1.192 1.213
N23 C24 1.459 1.480
N23 C25 1.439 1.387
N34 C25 1.314 1.317
N34 C33 1.379 1.338
C32 C33 1.443 1.405
C32 C31 1.391 1.362
C25 C26 1.417 1.403
C33 C28 1.374 1.417
C31 C30 1.414 1.392
C26 C27 1.388 1.361
C28 C27 1.415 1.410
C28 C29 1.432 1.404
C30 C29 1.414 1.362
C01 H1 1.100 1.090
C01 H2 1.100 1.090
C01 H3 1.100 1.089
C05 H4 1.100 1.090
C05 H5 1.100 1.090
C06 H6 1.101 1.090
C06 H7 1.100 1.090
C07 H8 1.100 1.089
C08 H9 1.100 1.090
C08 H10 1.100 1.090
C09 H11 1.100 1.090
C09 H12 1.100 1.090
C13 H13 1.080 1.080
C14 H14 1.080 1.080
C15 H15 1.080 1.080
C16 H16 1.080 1.080
C21 H17 1.100 1.090
C22 H18 1.100 1.090
C22 H19 1.100 1.090
C24 H20 1.100 1.090
C24 H21 1.100 1.090
C26 H22 1.080 1.080
C27 H23 1.080 1.081
C29 H24 1.080 1.080
C30 H25 1.080 1.081
C31 H26 1.081 1.080
C32 H27 1.080 1.080

Bond Angles for 35D

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C14 C15 C16 119.9 120.9
C15 C14 H14 119.9 119.6
C14 C15 H15 120.0 119.5
C14 C13 H13 120.0 120.2
C15 C16 C17 120.0 119.7
C16 C15 H15 120.0 119.6
C15 C16 H16 120.0 120.2
C13 C12 C17 119.7 119.3
C12 C17 C16 120.2 119.4
C16 C17 N18 118.7 121.0
C17 C16 H16 120.0 120.1
C12 C17 N18 121.1 119.6
C17 N18 C19 120.5 119.7
N11 C10 C19 121.6 120.6
C10 C19 N18 118.4 120.6
N18 C19 O20 120.3 119.7
C10 C19 O20 121.3 119.7
C10 C07 H8 106.1 109.5
C08 C07 H8 106.7 109.5
C09 C08 H9 109.1 109.6
C09 C08 H10 109.1 109.4
C08 C09 H11 108.9 109.5
C08 C09 H12 108.9 109.6
C19 O20 C21 113.4 117.0
C07 C06 H6 109.0 109.4
C07 C06 H7 109.0 109.5
C22 C21 C24 89.4 86.3
C22 C21 H17 114.3 113.8
C22 N23 C24 89.9 90.7
C22 N23 C25 158.2 111.0
N23 C22 H18 114.1 113.7
N23 C22 H19 114.1 113.7
O20 C21 C24 109.1 113.7
O20 C21 H17 114.8 113.0
C01 C02 O03 120.5 120.1
C02 C01 H1 109.5 109.5
C02 C01 H2 109.5 109.4
C02 C01 H3 109.5 109.5
C21 C24 N23 89.8 86.2
C24 C21 H17 114.3 113.7
C21 C24 H20 114.1 113.8
C21 C24 H21 114.1 113.8
C06 C05 H4 108.8 109.6
C06 C05 H5 108.8 109.7
N04 C05 H4 108.9 109.6
N04 C05 H5 108.8 109.6
C24 N23 C25 111.3 110.9
N23 C24 H20 114.1 113.7
N23 C24 H21 114.1 113.8
N23 C25 C26 121.8 119.2
C33 C32 H27 120.3 120.1
C32 C31 H26 120.1 119.5
C25 C26 C27 118.6 119.9
C25 C26 H22 120.7 120.0
C31 C30 H25 119.6 119.5
C27 C26 H22 120.7 120.1
C26 C27 H23 120.3 120.8
C28 C27 H23 120.3 120.8
C28 C29 H24 120.2 120.2
C30 C29 H24 120.2 120.2
H1 C01 H2 109.4 109.4
H1 C01 H3 109.4 109.5
H2 C01 H3 109.5 109.5
H4 C05 H5 109.5 109.6
H6 C06 H7 109.5 109.5
H9 C08 H10 109.5 109.5
H11 C09 H12 109.5 109.7
H18 C22 H19 109.5 113.0
H20 C24 H21 109.5 113.0

Torsion Angles for 35D

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C15 C14 C13 H13 180.0 180.0
C14 C15 C16 C17 359.9 360.0
C16 C15 C14 H15 180.0 180.0
C14 C15 C16 H16 179.9 180.0
C14 C13 C12 C17 360.0 360.0
C16 C15 C14 H14 180.0 180.0
C14 C15 C16 H15 180.0 180.0
C12 C17 C16 C15 0.1 0.0
C15 C16 C17 N18 180.0 180.0
C17 C16 C15 H16 180.0 180.0
C13 C12 C17 C16 360.0 360.0
C13 C12 C17 N18 180.1 180.0
C17 C16 C15 H15 180.0 180.0
C15 C16 C17 H16 180.0 180.0
C12 C17 C16 N18 180.1 180.0
C16 C17 N18 C19 180.1 180.0
C15 C16 C17 C12 0.1 0.0
C16 C17 C12 N18 179.9 180.0
C12 C17 C16 H16 180.1 180.0
C12 C17 N18 C19 360.0 0.0
C12 N11 C10 C19 359.6 360.0
C12 C17 N18 C16 179.9 180.0
N18 C17 C16 H16 360.0 0.0
C10 C19 N18 C17 359.8 0.0
C17 N18 C19 O20 180.6 180.3
N11 C10 C19 N18 0.4 360.0
N11 C10 C19 O20 179.7 179.7
N11 C10 C07 H8 223.2 180.3
C10 C19 N18 O20 179.3 179.7
N18 C19 O20 C21 337.9 359.7
C17 N18 C19 C10 359.8 0.0
N18 C19 C10 O20 180.7 180.3
C19 C10 C07 H8 43.8 360.0
C10 C19 O20 C21 158.6 180.0
C08 C07 C10 H8 115.4 120.0
C10 C07 C06 H6 299.6 58.7
C10 C07 C06 H7 59.1 298.6
C10 C07 C08 H8 245.0 240.0
C08 C07 C06 H6 66.4 178.6
C08 C07 C06 H7 185.9 58.6
C09 C08 C07 H8 298.0 301.2
H9 C08 C09 H10 119.5 120.1
H11 C09 C08 H12 240.7 120.4
C10 C19 O20 N18 180.8 180.3
C19 O20 C21 C24 180.4 210.0
C19 O20 C21 H17 310.2 341.5
C07 C06 C05 H4 171.2 294.8
C07 C06 C05 H5 290.4 174.5
H6 C06 C07 H7 240.5 120.0
C09 N04 C05 H4 188.8 66.4
C09 N04 C05 H5 69.5 186.7
O20 C21 C22 C24 110.4 114.3
O20 C21 C22 H17 227.0 228.7
C22 C21 C24 N23 6.9 23.7
C24 C21 C22 H17 116.5 114.3
C22 C21 C24 H20 123.4 138.0
C22 C21 C24 H21 250.3 269.4
N23 C22 C21 C24 353.1 336.3
N23 C22 C21 H17 236.6 221.9
C21 C24 N23 C22 353.1 335.3
C24 N23 C22 C25 192.0 247.2
C22 N23 C24 H20 236.6 221.0
C22 N23 C24 H21 109.6 89.6
C22 N23 C25 C26 197.9 180.0
H18 C22 N23 H19 126.9 131.3
C22 C21 O20 C24 262.5 263.3
C22 C21 O20 H17 132.8 131.7
O20 C21 C24 N23 253.4 269.4
C24 C21 O20 H17 230.3 228.5
O20 C21 C24 H20 9.9 23.6
O20 C21 C24 H21 136.9 155.0
H1 C01 C02 H2 240.0 240.1
H1 C01 C02 H3 120.0 120.0
H2 C01 C02 H3 240.0 239.9
C22 C21 C24 H17 243.5 245.5
C22 N23 C24 C21 353.1 335.3
O20 C21 C24 H17 130.0 131.2
C21 C24 N23 C25 177.9 222.4
N23 C24 C21 H20 243.5 245.7
N23 C24 C21 H21 116.5 114.4
H20 C24 C21 H21 233.0 228.6
N04 C05 C06 H4 239.6 119.8
N04 C05 C06 H5 120.4 240.1
H4 C05 C06 H5 240.8 120.3
N04 C02 C01 H1 180.0 180.0
N04 C02 C01 H2 300.0 299.9
N04 C02 C01 H3 60.0 60.0
C06 C05 N04 H4 120.4 240.2
C06 C05 N04 H5 239.6 119.9
H4 C05 N04 H5 119.3 239.7
O03 C02 C01 H1 0.0 0.1
O03 C02 C01 H2 120.0 120.0
O03 C02 C01 H3 240.0 240.1
C22 N23 C24 C25 175.2 112.9
C24 N23 C22 H18 250.3 270.3
C24 N23 C22 H19 123.5 139.1
N23 C24 C21 H17 123.4 138.2
C21 C24 N23 H20 116.5 114.3
C21 C24 N23 H21 243.5 245.7
C24 N23 C25 C26 5.0 279.3
H20 C24 N23 H21 127.0 131.3
C22 N23 C25 C24 192.9 260.7
C25 N23 C22 H18 58.3 23.2
C25 N23 C22 H19 291.5 251.9
C25 N23 C24 H20 61.3 108.1
C25 N23 C24 H21 294.4 336.8
N23 C25 C26 C27 180.1 180.0
N23 C25 C26 H22 0.1 360.0
N34 C25 C26 H22 179.9 180.2
N34 C33 C32 H27 359.8 0.3
C33 C32 C31 H26 180.1 180.0
C32 C31 C30 H25 179.9 180.0
C27 C26 C25 H22 180.0 180.0
C25 C26 C27 H23 180.0 180.0
C33 C28 C27 H23 180.0 180.0
C33 C28 C29 H24 180.0 179.9
C31 C30 C29 H24 180.0 180.1
C25 C26 C27 H22 180.0 180.0
C28 C27 C26 H23 180.0 180.0
C28 C27 C26 H22 180.0 180.0
C26 C27 C28 H23 180.0 180.0
C29 C28 C27 H23 360.0 0.0
C30 C29 C28 H24 180.0 180.1
C28 C29 C30 H24 180.0 179.9
H1 C01 C02 O03 0.0 0.1
C02 C01 H1 H2 120.0 119.9
C02 C01 H1 H3 240.0 239.9
H2 C01 H1 H3 120.0 120.0
H2 C01 C02 O03 120.0 120.0
C02 C01 H2 H1 240.0 240.1
C02 C01 H2 H3 120.0 120.1
H1 C01 H2 H3 240.0 240.0
H3 C01 C02 O03 240.0 240.1
C02 C01 H3 H1 120.0 120.0
C02 C01 H3 H2 240.0 240.0
H1 C01 H3 H2 120.0 120.0
C06 C05 H4 H5 118.8 239.7
N04 C05 H4 H5 241.1 120.3
C06 C05 H5 H4 241.2 120.3
N04 C05 H5 H4 118.9 239.7
C07 C06 H6 H7 119.1 240.0
H6 C06 C05 H4 50.9 54.7
H6 C06 C05 H5 170.1 294.4
C07 C06 H7 H6 240.8 120.0
H7 C06 C05 H4 291.4 174.9
H7 C06 C05 H5 50.7 54.6
H8 C07 C06 H6 182.8 298.7
H8 C07 C06 H7 302.3 178.7
H9 C08 C07 H8 58.3 61.3
C09 C08 H9 H10 240.7 240.0
H9 C08 C09 H11 308.1 65.6
H9 C08 C09 H12 67.4 305.2
H10 C08 C07 H8 177.8 181.4
C09 C08 H10 H9 119.3 120.1
H10 C08 C09 H11 188.5 305.5
H10 C08 C09 H12 307.9 185.1
H11 C09 C08 H9 308.1 65.6
H11 C09 C08 H10 188.5 305.5
C08 C09 H11 H12 119.0 239.7
H12 C09 C08 H9 67.4 305.2
H12 C09 C08 H10 307.9 185.1
C08 C09 H12 H11 241.0 120.3
H13 C13 C12 C17 180.0 180.0
H14 C14 C15 C16 180.0 180.0
H14 C14 C15 H15 0.0 360.0
H14 C14 C13 H13 360.0 360.0
C14 C15 H15 C16 180.0 180.0
H15 C15 C14 H14 0.0 360.0
H15 C15 C16 C17 180.0 180.0
H15 C15 C16 H16 359.9 0.0
C15 C16 H16 C17 180.0 180.0
H16 C16 C15 H15 359.9 0.0
H16 C16 C17 N18 360.0 0.0
C22 C21 H17 C24 101.0 96.8
O20 C21 H17 C24 232.9 228.5
H17 C21 C24 N23 123.4 138.2
H17 C21 C24 H20 239.9 252.5
H17 C21 C24 H21 6.9 23.8
H18 C22 C21 C24 109.7 90.6
H18 C22 C21 H17 353.2 336.2
H18 C22 N23 C24 250.3 270.3
H18 C22 N23 C25 58.3 23.2
N23 C22 H18 H19 230.8 228.4
H19 C22 C21 C24 236.6 222.0
H19 C22 C21 H17 120.1 107.6
H19 C22 N23 C24 123.5 139.1
H19 C22 N23 C25 291.5 251.9
N23 C22 H19 H18 129.2 131.6
C21 C24 H20 N23 258.6 263.5
H20 C24 C21 H17 239.9 252.5
C21 C24 H20 H21 129.3 131.7
H20 C24 N23 C25 61.3 108.1
N23 C24 H20 H21 230.7 228.3
C21 C24 H21 N23 101.3 96.6
H21 C24 C21 H17 6.9 23.8
C21 C24 H21 H20 230.7 228.3
H21 C24 N23 C25 294.4 336.8
N23 C24 H21 H20 129.3 131.7
C25 C26 H22 C27 180.0 180.0
H22 C26 C27 H23 0.0 0.0
H23 C27 C26 H22 0.0 0.0
H25 C30 C29 H24 0.0 0.1
H26 C31 C30 H25 359.9 0.0
H27 C32 C31 H26 0.1 360.0