PDB Chemical Component 356
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 356
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C14 |
N8 |
1.485 |
1.464 |
| C22 |
C17 |
1.568 |
1.531 |
| C22 |
C26 |
1.596 |
1.531 |
| O19 |
C13 |
1.230 |
1.216 |
| N8 |
C13 |
1.353 |
1.347 |
| N8 |
C3 |
1.391 |
1.385 |
| C17 |
N11 |
1.428 |
1.468 |
| C26 |
C21 |
1.566 |
1.531 |
| N7 |
C3 |
1.296 |
1.335 |
| N7 |
C5 |
1.295 |
1.318 |
| C13 |
N9 |
1.373 |
1.343 |
| C3 |
C1 |
1.412 |
1.390 |
| N11 |
C5 |
1.368 |
1.376 |
| N11 |
C16 |
1.451 |
1.468 |
| C5 |
N2 |
1.395 |
1.360 |
| C21 |
C16 |
1.521 |
1.531 |
| C21 |
N27 |
1.463 |
1.469 |
| C32 |
C29 |
1.516 |
1.507 |
| N9 |
C15 |
1.496 |
1.465 |
| N9 |
C4 |
1.392 |
1.349 |
| C33 |
C35 |
1.392 |
1.363 |
| C33 |
C30 |
1.431 |
1.403 |
| C1 |
N2 |
1.423 |
1.388 |
| C1 |
C4 |
1.438 |
1.407 |
| C29 |
C30 |
1.444 |
1.406 |
| C29 |
N25 |
1.346 |
1.318 |
| C35 |
C34 |
1.429 |
1.393 |
| C30 |
C28 |
1.464 |
1.419 |
| N25 |
C20 |
1.340 |
1.324 |
| C34 |
C31 |
1.393 |
1.362 |
| C28 |
C31 |
1.416 |
1.403 |
| C28 |
N24 |
1.341 |
1.338 |
| C20 |
N24 |
1.326 |
1.312 |
| C20 |
C15 |
1.529 |
1.508 |
| N2 |
C6 |
1.508 |
1.465 |
| C4 |
O10 |
1.226 |
1.219 |
| C6 |
C12 |
1.457 |
1.472 |
| C12 |
C18 |
1.164 |
1.174 |
| C18 |
C23 |
1.459 |
1.473 |
| C6 |
H61 |
1.100 |
1.090 |
| C6 |
H62 |
1.100 |
1.090 |
| C14 |
H141 |
1.100 |
1.090 |
| C14 |
H142 |
1.099 |
1.090 |
| C14 |
H143 |
1.100 |
1.089 |
| C15 |
H151 |
1.100 |
1.089 |
| C15 |
H152 |
1.100 |
1.090 |
| C16 |
H161 |
1.100 |
1.090 |
| C16 |
H162 |
1.100 |
1.090 |
| C17 |
H171 |
1.100 |
1.090 |
| C17 |
H172 |
1.100 |
1.090 |
| C21 |
H21 |
1.100 |
1.090 |
| C22 |
H221 |
1.100 |
1.090 |
| C22 |
H222 |
1.100 |
1.090 |
| C23 |
H231 |
1.100 |
1.090 |
| C23 |
H232 |
1.100 |
1.090 |
| C23 |
H233 |
1.100 |
1.090 |
| C26 |
H261 |
1.100 |
1.090 |
| C26 |
H262 |
1.100 |
1.090 |
| N27 |
H271 |
1.000 |
1.009 |
| N27 |
H272 |
1.000 |
1.009 |
| C31 |
H31 |
1.080 |
1.080 |
| C32 |
H321 |
1.099 |
1.090 |
| C32 |
H322 |
1.100 |
1.090 |
| C32 |
H323 |
1.100 |
1.090 |
| C33 |
H33 |
1.080 |
1.080 |
| C34 |
H34 |
1.080 |
1.080 |
| C35 |
H35 |
1.080 |
1.080 |
Bond Angles for 356
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C22 |
C17 |
H171 |
111.4 |
109.4 |
| C22 |
C17 |
H172 |
112.5 |
109.5 |
| C26 |
C22 |
H221 |
108.1 |
109.5 |
| C26 |
C22 |
H222 |
107.1 |
109.5 |
| C22 |
C26 |
H261 |
108.1 |
109.6 |
| C22 |
C26 |
H262 |
107.1 |
109.5 |
| N8 |
C13 |
N9 |
121.1 |
121.6 |
| C26 |
C21 |
N27 |
111.4 |
109.5 |
| C26 |
C21 |
H21 |
108.6 |
109.5 |
| C13 |
N9 |
C15 |
119.1 |
119.5 |
| C3 |
C1 |
C4 |
117.2 |
119.2 |
| N11 |
C16 |
H161 |
111.9 |
109.5 |
| N11 |
C16 |
H162 |
113.3 |
109.5 |
| C5 |
N2 |
C6 |
126.9 |
126.6 |
| C21 |
C16 |
H161 |
111.9 |
109.5 |
| C21 |
C16 |
H162 |
113.3 |
109.5 |
| N27 |
C21 |
H21 |
108.4 |
109.5 |
| C21 |
N27 |
H271 |
109.5 |
111.0 |
| C21 |
N27 |
H272 |
109.5 |
111.0 |
| N9 |
C15 |
H151 |
110.1 |
109.5 |
| N9 |
C15 |
H152 |
110.5 |
109.5 |
| N9 |
C4 |
O10 |
120.7 |
120.4 |
| C33 |
C35 |
C34 |
121.2 |
120.9 |
| C35 |
C33 |
H33 |
120.4 |
120.2 |
| C33 |
C35 |
H35 |
119.4 |
119.5 |
| N2 |
C1 |
C4 |
136.9 |
134.4 |
| C1 |
N2 |
C6 |
129.2 |
126.7 |
| C1 |
C4 |
O10 |
119.8 |
120.3 |
| C35 |
C34 |
H34 |
119.5 |
119.4 |
| C30 |
C28 |
C31 |
119.7 |
119.3 |
| C34 |
C31 |
H31 |
120.2 |
120.2 |
| C28 |
C31 |
H31 |
120.3 |
120.2 |
| C20 |
C15 |
H151 |
110.1 |
109.5 |
| C20 |
C15 |
H152 |
110.6 |
109.4 |
| N2 |
C6 |
C12 |
118.8 |
109.5 |
| N2 |
C6 |
H61 |
106.5 |
109.4 |
| N2 |
C6 |
H62 |
104.3 |
109.4 |
| C6 |
C12 |
C18 |
175.3 |
179.9 |
| C12 |
C6 |
H61 |
106.5 |
109.5 |
| C12 |
C6 |
H62 |
104.3 |
109.6 |
| C12 |
C18 |
C23 |
178.3 |
179.9 |
| C18 |
C23 |
H231 |
109.5 |
109.5 |
| C18 |
C23 |
H232 |
109.5 |
109.4 |
| C18 |
C23 |
H233 |
109.4 |
109.5 |
| H61 |
C6 |
H62 |
117.1 |
109.5 |
| H141 |
C14 |
H142 |
109.5 |
109.4 |
| H141 |
C14 |
H143 |
109.4 |
109.5 |
| H142 |
C14 |
H143 |
109.5 |
109.5 |
| H151 |
C15 |
H152 |
108.0 |
109.5 |
| H161 |
C16 |
H162 |
104.2 |
109.4 |
| H171 |
C17 |
H172 |
105.3 |
109.5 |
| H221 |
C22 |
H222 |
112.8 |
109.5 |
| H231 |
C23 |
H232 |
109.4 |
109.5 |
| H231 |
C23 |
H233 |
109.5 |
109.5 |
| H232 |
C23 |
H233 |
109.5 |
109.5 |
| H261 |
C26 |
H262 |
112.9 |
109.5 |
| H271 |
N27 |
H272 |
109.5 |
110.9 |
| H321 |
C32 |
H322 |
109.5 |
109.4 |
| H321 |
C32 |
H323 |
109.5 |
109.5 |
| H322 |
C32 |
H323 |
109.5 |
109.5 |
Torsion Angles for 356
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H171 |
C17 |
C22 |
H172 |
242.0 |
120.0 |
| C26 |
C22 |
C17 |
H171 |
76.4 |
180.8 |
| C26 |
C22 |
C17 |
H172 |
194.3 |
60.8 |
| C22 |
C26 |
C21 |
N27 |
193.1 |
182.4 |
| C22 |
C26 |
C21 |
H21 |
73.8 |
62.3 |
| H221 |
C22 |
C26 |
H222 |
121.8 |
120.1 |
| H261 |
C26 |
C22 |
H262 |
238.1 |
120.1 |
| N8 |
C13 |
N9 |
C15 |
181.2 |
179.8 |
| C17 |
N11 |
C16 |
H161 |
39.1 |
58.3 |
| C17 |
N11 |
C16 |
H162 |
156.6 |
178.3 |
| C26 |
C21 |
C16 |
H161 |
301.7 |
299.1 |
| C26 |
C21 |
C16 |
H162 |
184.2 |
179.2 |
| N27 |
C21 |
C26 |
H21 |
119.3 |
120.1 |
| C26 |
C21 |
N27 |
H271 |
124.0 |
299.9 |
| C26 |
C21 |
N27 |
H272 |
244.0 |
63.7 |
| C13 |
N9 |
C15 |
H151 |
180.6 |
30.0 |
| C13 |
N9 |
C15 |
H152 |
299.9 |
150.0 |
| N2 |
C1 |
C3 |
C4 |
180.0 |
180.3 |
| C3 |
C1 |
N2 |
C6 |
176.7 |
179.8 |
| C3 |
C1 |
C4 |
O10 |
178.7 |
180.2 |
| C21 |
C16 |
N11 |
H161 |
240.0 |
240.0 |
| C21 |
C16 |
N11 |
H162 |
122.5 |
120.0 |
| H161 |
C16 |
N11 |
H162 |
242.5 |
240.0 |
| C1 |
N2 |
C5 |
C6 |
179.8 |
180.0 |
| C5 |
N2 |
C6 |
C12 |
255.2 |
270.1 |
| C5 |
N2 |
C6 |
H61 |
15.2 |
30.0 |
| C5 |
N2 |
C6 |
H62 |
139.7 |
150.0 |
| N11 |
C16 |
C21 |
H161 |
120.0 |
120.0 |
| N11 |
C16 |
C21 |
H162 |
237.5 |
239.9 |
| H161 |
C16 |
C21 |
H162 |
117.5 |
119.9 |
| C26 |
C21 |
N27 |
H21 |
240.5 |
239.9 |
| N27 |
C21 |
C16 |
H161 |
62.9 |
59.1 |
| N27 |
C21 |
C16 |
H162 |
305.4 |
299.2 |
| H271 |
N27 |
C21 |
H272 |
240.0 |
236.1 |
| C15 |
N9 |
C4 |
O10 |
359.6 |
360.0 |
| C20 |
C15 |
N9 |
H151 |
240.0 |
240.0 |
| C20 |
C15 |
N9 |
H152 |
120.8 |
119.9 |
| H151 |
C15 |
N9 |
H152 |
240.8 |
240.0 |
| C1 |
C4 |
N9 |
O10 |
179.4 |
180.0 |
| C33 |
C35 |
C34 |
H34 |
179.8 |
179.5 |
| C3 |
C1 |
N2 |
C4 |
180.0 |
179.7 |
| C5 |
N2 |
C1 |
C6 |
180.2 |
180.0 |
| N2 |
C1 |
C4 |
O10 |
358.7 |
359.9 |
| C1 |
N2 |
C6 |
C12 |
75.4 |
90.0 |
| C1 |
N2 |
C6 |
H61 |
195.4 |
210.0 |
| C1 |
N2 |
C6 |
H62 |
319.9 |
330.0 |
| N9 |
C4 |
C1 |
O10 |
180.5 |
180.0 |
| C4 |
C1 |
N2 |
C6 |
356.8 |
0.1 |
| C29 |
C30 |
C28 |
C31 |
179.8 |
179.5 |
| C34 |
C35 |
C33 |
H33 |
180.1 |
180.0 |
| C33 |
C35 |
C34 |
H35 |
180.0 |
178.9 |
| C35 |
C34 |
C31 |
H31 |
180.1 |
180.4 |
| C30 |
C28 |
C31 |
H31 |
180.0 |
179.9 |
| N25 |
C20 |
C15 |
H151 |
95.5 |
149.8 |
| N25 |
C20 |
C15 |
H152 |
336.3 |
29.8 |
| C28 |
C31 |
C34 |
H31 |
180.0 |
179.9 |
| C34 |
C31 |
C28 |
H31 |
180.0 |
180.1 |
| N24 |
C20 |
C15 |
H151 |
274.4 |
329.9 |
| N24 |
C20 |
C15 |
H152 |
155.2 |
210.0 |
| N9 |
C15 |
C20 |
H151 |
120.0 |
120.0 |
| N9 |
C15 |
C20 |
H152 |
239.2 |
240.0 |
| H151 |
C15 |
C20 |
H152 |
119.3 |
120.0 |
| C6 |
N2 |
C1 |
C4 |
356.8 |
0.1 |
| N2 |
C6 |
C12 |
C18 |
178.6 |
275.3 |
| C12 |
C6 |
N2 |
H61 |
240.0 |
240.0 |
| C12 |
C6 |
N2 |
H62 |
115.5 |
120.1 |
| H61 |
C6 |
N2 |
H62 |
235.5 |
240.1 |
| N2 |
C6 |
C12 |
H61 |
120.0 |
120.0 |
| N2 |
C6 |
C12 |
H62 |
244.5 |
240.0 |
| C6 |
C12 |
C18 |
C23 |
0.7 |
207.5 |
| H61 |
C6 |
C12 |
H62 |
124.5 |
120.0 |
| C18 |
C12 |
C6 |
H61 |
58.6 |
155.4 |
| C18 |
C12 |
C6 |
H62 |
294.2 |
35.4 |
| C12 |
C18 |
C23 |
H231 |
42.1 |
57.1 |
| C12 |
C18 |
C23 |
H232 |
162.0 |
177.1 |
| C12 |
C18 |
C23 |
H233 |
282.1 |
297.1 |
| H231 |
C23 |
C18 |
H232 |
240.1 |
240.0 |
| H231 |
C23 |
C18 |
H233 |
120.0 |
120.0 |
| H232 |
C23 |
C18 |
H233 |
239.9 |
240.0 |
| N2 |
C6 |
H61 |
C12 |
232.3 |
240.0 |
| N2 |
C6 |
H61 |
H62 |
116.2 |
119.9 |
| H61 |
C6 |
C12 |
C18 |
58.6 |
155.4 |
| C12 |
C6 |
H61 |
H62 |
243.9 |
239.9 |
| N2 |
C6 |
H62 |
C12 |
125.3 |
120.0 |
| N2 |
C6 |
H62 |
H61 |
242.7 |
240.1 |
| H62 |
C6 |
C12 |
C18 |
294.2 |
35.4 |
| C12 |
C6 |
H62 |
H61 |
117.3 |
120.0 |
| H142 |
C14 |
H141 |
H143 |
120.0 |
120.0 |
| H141 |
C14 |
H142 |
H143 |
240.0 |
240.0 |
| H141 |
C14 |
H143 |
H142 |
120.0 |
119.9 |
| N9 |
C15 |
H151 |
H152 |
120.8 |
120.1 |
| C20 |
C15 |
H151 |
H152 |
239.2 |
240.1 |
| N9 |
C15 |
H152 |
H151 |
239.5 |
240.0 |
| C20 |
C15 |
H152 |
H151 |
120.5 |
120.0 |
| N11 |
C16 |
H161 |
H162 |
122.8 |
120.0 |
| C21 |
C16 |
H161 |
H162 |
237.2 |
240.1 |
| N11 |
C16 |
H162 |
H161 |
238.1 |
240.0 |
| C21 |
C16 |
H162 |
H161 |
121.9 |
119.9 |
| C22 |
C17 |
H171 |
H172 |
122.2 |
240.0 |
| C22 |
C17 |
H172 |
H171 |
238.5 |
120.0 |
| C26 |
C21 |
H21 |
N27 |
121.2 |
120.1 |
| H21 |
C21 |
C16 |
H161 |
182.2 |
179.2 |
| H21 |
C21 |
C16 |
H162 |
64.7 |
59.2 |
| H21 |
C21 |
N27 |
H271 |
243.4 |
60.0 |
| H21 |
C21 |
N27 |
H272 |
3.5 |
183.8 |
| H221 |
C22 |
C17 |
H171 |
196.4 |
300.8 |
| H221 |
C22 |
C17 |
H172 |
314.3 |
180.8 |
| C26 |
C22 |
H221 |
H222 |
241.7 |
239.8 |
| H221 |
C22 |
C26 |
H261 |
38.5 |
177.8 |
| H221 |
C22 |
C26 |
H262 |
160.4 |
57.6 |
| H222 |
C22 |
C17 |
H171 |
318.2 |
60.9 |
| H222 |
C22 |
C17 |
H172 |
76.2 |
300.9 |
| C26 |
C22 |
H222 |
H221 |
118.8 |
120.2 |
| H222 |
C22 |
C26 |
H261 |
276.7 |
57.6 |
| H222 |
C22 |
C26 |
H262 |
38.5 |
297.5 |
| C18 |
C23 |
H231 |
H232 |
120.0 |
120.0 |
| C18 |
C23 |
H231 |
H233 |
240.0 |
240.0 |
| H232 |
C23 |
H231 |
H233 |
120.0 |
120.0 |
| C18 |
C23 |
H232 |
H231 |
240.0 |
240.0 |
| C18 |
C23 |
H232 |
H233 |
120.0 |
120.0 |
| H231 |
C23 |
H232 |
H233 |
240.0 |
240.0 |
| C18 |
C23 |
H233 |
H231 |
120.0 |
120.0 |
| C18 |
C23 |
H233 |
H232 |
240.0 |
240.0 |
| H231 |
C23 |
H233 |
H232 |
120.0 |
120.0 |
| H261 |
C26 |
C22 |
H221 |
38.5 |
177.8 |
| H261 |
C26 |
C22 |
H222 |
276.7 |
57.6 |
| C22 |
C26 |
H261 |
H262 |
118.3 |
239.9 |
| H261 |
C26 |
C21 |
N27 |
73.1 |
302.4 |
| H261 |
C26 |
C21 |
H21 |
313.8 |
182.3 |
| H262 |
C26 |
C22 |
H221 |
160.4 |
57.6 |
| H262 |
C26 |
C22 |
H222 |
38.5 |
297.5 |
| C22 |
C26 |
H262 |
H261 |
241.2 |
120.2 |
| H262 |
C26 |
C21 |
N27 |
311.3 |
62.4 |
| H262 |
C26 |
C21 |
H21 |
191.9 |
302.4 |
| H271 |
N27 |
C21 |
H21 |
243.4 |
60.0 |
| C21 |
N27 |
H271 |
H272 |
120.1 |
123.9 |
| H272 |
N27 |
C21 |
H21 |
3.5 |
183.8 |
| C21 |
N27 |
H272 |
H271 |
239.9 |
236.1 |
| H322 |
C32 |
H321 |
H323 |
120.1 |
120.0 |
| H321 |
C32 |
H322 |
H323 |
240.0 |
240.0 |
| H321 |
C32 |
H323 |
H322 |
120.0 |
119.9 |
| H33 |
C33 |
C35 |
C34 |
180.1 |
180.0 |
| H33 |
C33 |
C35 |
H35 |
0.1 |
359.0 |
| H34 |
C34 |
C31 |
H31 |
0.1 |
0.1 |
| C33 |
C35 |
H35 |
C34 |
180.0 |
181.0 |
| H35 |
C35 |
C33 |
H33 |
0.1 |
359.0 |
| H35 |
C35 |
C34 |
H34 |
359.8 |
0.5 |