PDB Chemical Component 353

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 353

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C5 1.389 1.381
C1 C10 1.400 1.388
C2 C6 1.385 1.382
C2 C10 1.403 1.389
C3 C4 1.389 1.380
C3 C11 1.404 1.390
C4 C12 1.390 1.388
C5 C14 1.393 1.384
C6 C14 1.386 1.385
C7 C9 1.384 1.378
C7 C13 1.392 1.395
C8 C11 1.393 1.389
C8 C15 1.389 1.383
C9 N26 1.353 1.321
C10 N27 1.416 1.401
C11 N29 1.402 1.400
C12 C15 1.394 1.389
C12 O32 1.369 1.360
C13 C16 1.398 1.390
C13 O32 1.384 1.357
C14 F34 1.336 1.352
C15 F35 1.340 1.351
C16 C17 1.399 1.390
C16 CL36 1.727 1.737
C17 N26 1.354 1.325
C17 N28 1.405 1.391
C18 C19 1.334 1.352
C18 C21 1.443 1.404
C19 N27 1.378 1.359
C20 C21 1.347 1.404
C20 C22 1.512 1.416
C20 C23 1.514 1.467
C21 O33 1.376 1.352
C22 N27 1.402 1.346
C22 O30 1.227 1.219
C23 N29 1.379 1.348
C23 O31 1.225 1.217
C24 C25 1.513 1.530
C25 O33 1.431 1.429
C1 H1 1.080 1.081
C2 H2 1.080 1.079
C3 H3 1.080 1.080
C4 H4 1.080 1.080
C5 H5 1.080 1.080
C6 H6 1.080 1.080
C7 H7 1.080 1.080
C8 H8 1.080 1.079
C9 H9 1.080 1.080
C18 H18 1.080 1.080
C19 H19 1.080 1.080
C24 H24 1.100 1.090
C24 H24A 1.100 1.090
C24 H24B 1.100 1.090
C25 H25 1.100 1.090
C25 H25A 1.101 1.090
N28 HN28 1.000 0.971
N28 HN2A 1.001 0.970
N29 HN29 1.000 0.969

Bond Angles for 353

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C5 C1 C10 119.2 120.0
C1 C5 C14 119.4 120.0
C5 C1 H1 120.4 120.0
C1 C5 H5 120.3 120.0
C1 C10 C2 120.7 119.9
C1 C10 N27 120.2 120.1
C10 C1 H1 120.4 120.0
C6 C2 C10 119.8 119.9
C2 C6 C14 119.0 120.0
C6 C2 H2 120.1 120.0
C2 C6 H6 120.5 120.0
C2 C10 N27 119.1 120.0
C10 C2 H2 120.1 120.1
C4 C3 C11 120.5 120.0
C3 C4 C12 119.2 120.0
C4 C3 H3 119.8 120.0
C3 C4 H4 120.4 120.0
C3 C11 C8 120.0 120.0
C3 C11 N29 116.3 120.0
C11 C3 H3 119.7 120.0
C4 C12 C15 120.4 120.0
C4 C12 O32 120.0 120.0
C12 C4 H4 120.4 119.9
C5 C14 C6 121.9 120.2
C5 C14 F34 119.3 119.9
C14 C5 H5 120.3 120.0
C6 C14 F34 118.8 119.9
C14 C6 H6 120.5 120.0
C9 C7 C13 117.7 119.3
C7 C9 N26 124.4 120.9
C9 C7 H7 121.2 120.3
C7 C9 H9 117.8 119.6
C7 C13 C16 119.0 118.4
C7 C13 O32 123.4 120.8
C13 C7 H7 121.1 120.4
C11 C8 C15 119.3 119.9
C8 C11 N29 123.8 120.0
C11 C8 H8 120.4 120.0
C8 C15 C12 120.6 120.0
C8 C15 F35 118.7 120.0
C15 C8 H8 120.4 120.0
C9 N26 C17 117.8 121.8
N26 C9 H9 117.8 119.5
C10 N27 C19 121.1 119.4
C10 N27 C22 116.5 119.3
C11 N29 C23 127.3 120.0
C11 N29 HN29 116.4 120.0
C15 C12 O32 119.6 120.0
C12 C15 F35 120.7 120.0
C12 O32 C13 115.7 118.0
C16 C13 O32 117.6 120.8
C13 C16 C17 119.6 119.0
C13 C16 CL36 119.8 120.5
C17 C16 CL36 120.5 120.5
C16 C17 N26 121.5 120.6
C16 C17 N28 120.0 119.7
N26 C17 N28 118.5 119.7
C17 N28 HN28 109.5 120.0
C17 N28 HN2A 109.5 120.0
C19 C18 C21 120.1 120.0
C18 C19 N27 121.1 121.3
C19 C18 H18 120.0 120.0
C18 C19 H19 119.4 119.4
C18 C21 C20 122.0 118.8
C18 C21 O33 114.7 120.6
C21 C18 H18 119.9 120.0
C19 N27 C22 122.3 121.2
N27 C19 H19 119.5 119.3
C21 C20 C22 117.6 118.7
C21 C20 C23 119.0 120.6
C20 C21 O33 123.2 120.6
C22 C20 C23 123.4 120.6
C20 C22 N27 116.8 119.9
C20 C22 O30 120.4 120.1
C20 C23 N29 113.0 120.0
C20 C23 O31 121.8 120.0
C21 O33 C25 113.3 117.0
N27 C22 O30 122.8 120.1
N29 C23 O31 125.3 120.0
C23 N29 HN29 116.3 120.0
C24 C25 O33 106.6 109.5
C25 C24 H24 109.5 109.4
C25 C24 H24A 109.4 109.5
C25 C24 H24B 109.4 109.5
C24 C25 H25 110.5 109.5
C24 C25 H25A 111.1 109.5
O33 C25 H25 110.4 109.5
O33 C25 H25A 111.1 109.5
H24 C24 H24A 109.5 109.5
H24 C24 H24B 109.5 109.4
H24A C24 H24B 109.5 109.5
H25 C25 H25A 107.3 109.5
HN28 N28 HN2A 109.5 119.9

Torsion Angles for 353

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C5 C1 C10 C2 0.5 360.0
C5 C1 C10 N27 179.8 180.0
C10 C1 C5 H1 180.0 180.2
C1 C5 C14 C6 360.0 0.0
C1 C5 C14 F34 180.0 180.0
C14 C5 C1 H5 180.0 179.9
C10 C1 C5 C14 359.7 0.0
C5 C1 C10 H1 180.0 179.8
C10 C1 C5 H5 179.7 180.1
C6 C2 C10 C1 359.6 360.0
C2 C10 C1 N27 180.7 179.9
C1 C10 C2 H2 179.6 180.0
C1 C10 N27 C19 66.8 113.0
C1 C10 N27 C22 246.8 292.8
C1 C10 C2 C6 359.6 360.0
C6 C2 C10 N27 180.3 179.9
C10 C2 C6 H2 180.0 180.0
C5 C14 C6 C2 0.1 359.9
C2 C6 C14 F34 180.1 180.0
C14 C6 C2 H6 180.0 180.0
C1 C10 C2 N27 179.3 180.1
C2 C10 C1 H1 180.4 180.2
C10 C2 C6 C14 0.1 0.0
C6 C2 C10 H2 180.0 180.0
C10 C2 C6 H6 180.1 180.0
C2 C10 N27 C19 246.1 293.0
C2 C10 N27 C22 66.1 112.9
C4 C3 C11 C8 0.1 360.0
C4 C3 C11 N29 180.1 180.0
C11 C3 C4 H3 180.0 180.3
C3 C4 C12 C15 0.2 360.0
C3 C4 C12 O32 179.7 179.9
C12 C4 C3 H4 180.0 180.1
C11 C3 C4 C12 359.9 0.0
C4 C3 C11 H3 180.0 179.7
C11 C3 C4 H4 179.9 180.0
C3 C11 C8 C15 359.8 0.0
C8 C11 C3 N29 180.0 180.0
C3 C11 C8 H8 179.8 180.0
C3 C11 N29 C23 188.6 211.2
C3 C11 N29 HN29 8.6 31.3
C12 C4 C3 C11 359.9 0.0
C12 C4 C3 H3 180.0 179.7
C3 C4 C12 H4 180.0 179.9
C8 C15 C12 C4 359.6 0.0
C15 C12 C4 O32 180.5 180.0
C4 C12 C15 F35 180.0 180.0
C4 C12 O32 C13 281.8 262.6
C14 C5 C1 C10 359.7 0.0
C14 C5 C1 H1 179.8 179.8
C1 C5 C14 H5 180.0 180.1
C2 C6 C14 C5 0.1 359.9
C6 C14 C5 F34 180.0 180.0
C5 C14 C6 H6 180.1 180.0
C14 C6 C2 C10 0.1 0.0
C14 C6 C2 H2 180.1 180.0
C2 C6 C14 H6 180.0 180.0
C5 C14 C6 F34 180.0 180.0
C6 C14 C5 H5 180.0 180.0
C9 C7 C13 C16 0.2 359.9
C9 C7 C13 O32 179.9 180.0
C13 C7 C9 H7 180.0 180.3
C7 C9 N26 C17 359.9 360.0
N26 C9 C7 H9 180.0 180.1
C13 C7 C9 N26 360.0 0.0
C9 C7 C13 H7 180.0 179.7
C13 C7 C9 H9 179.9 179.9
C12 O32 C13 C7 338.7 354.9
C16 C13 C7 O32 180.3 180.0
C7 C13 C16 C17 359.8 0.1
C7 C13 C16 CL36 179.8 180.0
C3 C11 C8 N29 180.0 180.0
C8 C11 C3 H3 180.0 180.3
C11 C8 C15 C12 0.4 360.0
C11 C8 C15 F35 180.0 180.0
C15 C8 C11 H8 180.0 180.1
C8 C11 N29 C23 8.6 31.2
C8 C11 N29 HN29 188.6 211.3
C4 C12 C15 C8 359.6 0.0
C15 C8 C11 N29 179.8 180.0
C11 C8 C15 H8 180.0 179.9
C8 C15 C12 O32 180.1 180.1
C12 C15 C8 F35 180.3 180.0
N26 C9 C7 C13 360.0 0.0
N26 C9 C7 H7 180.0 179.8
C7 C9 N26 H9 180.0 179.9
C16 C17 N26 C9 0.1 0.0
C9 N26 C17 N28 180.0 180.0
C1 C10 N27 C2 180.6 179.9
N27 C10 C1 H1 359.8 0.3
N27 C10 C2 H2 0.3 360.0
C18 C19 N27 C10 180.2 180.0
C19 N27 C10 C22 180.0 180.1
C10 N27 C19 H19 0.2 360.0
C20 C22 N27 C10 180.1 180.0
C10 N27 C22 O30 359.9 0.1
C3 C11 N29 C8 180.0 180.0
N29 C11 C3 H3 0.1 0.3
N29 C11 C8 C15 179.8 180.0
N29 C11 C8 H8 359.7 360.0
C20 C23 N29 C11 187.3 187.2
C11 N29 C23 O31 7.3 7.2
C23 N29 C11 HN29 180.0 180.0
C4 C12 C15 O32 179.5 180.0
C15 C12 C4 H4 180.2 180.0
C8 C15 C12 F35 179.7 180.0
C12 C15 C8 H8 180.4 180.0
C15 C12 O32 C13 101.3 82.5
C4 C12 O32 C15 180.5 180.0
O32 C12 C4 H4 359.7 360.0
C7 C13 O32 C12 338.7 354.9
O32 C12 C15 F35 0.5 0.0
C16 C13 O32 C12 158.5 174.9
C7 C13 C16 O32 179.8 180.0
C16 C13 C7 H7 180.2 180.2
C12 O32 C13 C16 158.5 174.9
C17 C16 C13 CL36 180.0 180.1
C13 C16 C17 N26 0.1 360.0
C13 C16 C17 N28 180.1 180.0
C7 C13 O32 C16 180.3 180.0
O32 C13 C7 H7 359.9 0.2
O32 C13 C16 C17 180.1 180.0
O32 C13 C16 CL36 0.1 359.9
C5 C14 F34 C6 180.0 180.0
F34 C14 C5 H5 0.0 359.9
F34 C14 C6 H6 0.1 0.0
C8 C15 F35 C12 180.3 180.0
F35 C15 C8 H8 0.0 0.0
F35 C15 C12 O32 0.5 0.0
C9 N26 C17 C16 0.1 0.0
C17 C16 C13 O32 180.1 180.0
C13 C16 C17 CL36 180.0 179.9
N26 C17 C16 N28 180.0 180.0
C16 C17 N28 HN28 260.7 360.0
C16 C17 N28 HN2A 20.7 180.0
CL36 C16 C13 O32 0.1 359.9
C13 C16 CL36 C17 180.0 180.1
CL36 C16 C17 N26 180.1 180.1
CL36 C16 C17 N28 0.1 0.1
C17 N26 C9 H9 180.0 180.1
N26 C17 C16 CL36 180.1 180.1
C16 C17 N26 N28 180.0 180.0
N26 C17 N28 HN28 80.7 180.0
N26 C17 N28 HN2A 200.7 360.0
N28 C17 C16 CL36 0.1 0.1
C16 C17 N28 N26 180.0 180.0
HN28 N28 C17 HN2A 240.0 180.0
C10 N27 C19 C18 180.2 180.0
C19 C18 C21 C20 0.1 0.0
C19 C18 C21 O33 180.2 180.0
C21 C18 C19 H18 180.0 180.2
C18 C19 N27 C22 0.1 0.1
N27 C19 C18 H19 180.0 180.0
C21 C18 C19 N27 359.8 359.9
C19 C18 C21 H18 180.0 179.8
C21 C18 C19 H19 179.8 180.0
C18 C21 C20 C22 0.1 359.9
C18 C21 C20 C23 180.1 180.0
C20 C21 C18 O33 179.8 180.0
C18 C21 O33 C25 348.9 64.4
C10 N27 C19 C22 180.0 179.9
N27 C19 C18 C21 359.8 359.9
N27 C19 C18 H18 179.8 179.7
C18 C19 N27 H19 180.0 180.0
C20 C22 N27 C19 0.1 359.8
C19 N27 C22 O30 179.9 180.0
C18 C21 C20 O33 180.2 180.0
C20 C21 C18 H18 180.1 180.2
C22 C20 C21 C23 180.1 180.0
C21 C20 C22 N27 359.8 0.1
C21 C20 C22 O30 179.9 180.0
C21 C20 C23 N29 183.6 186.0
C21 C20 C23 O31 3.5 6.1
C20 C21 O33 C25 169.1 244.3
C10 N27 C22 C20 180.1 180.0
C19 N27 C22 C20 0.1 359.8
C21 C20 C22 C23 179.9 180.0
C22 C20 C21 O33 179.9 180.0
C22 C20 C23 N29 3.5 6.1
C22 C20 C23 O31 183.5 186.1
N27 C22 C20 O30 179.9 180.1
C11 N29 C23 C20 187.3 187.2
C21 C20 C23 C22 180.1 180.0
C23 C20 C21 O33 359.9 0.0
C23 C20 C22 N27 179.9 180.1
C23 C20 C22 O30 0.0 360.0
N29 C23 C20 O31 180.0 180.0
C20 C23 N29 HN29 7.3 7.2
C18 C21 O33 C20 179.8 180.0
O33 C21 C18 H18 0.2 0.2
O33 C21 C20 C22 179.9 180.0
O33 C21 C20 C23 359.9 0.0
C24 C25 O33 C21 179.0 184.9
C21 O33 C25 H25 59.0 64.9
C21 O33 C25 H25A 300.2 304.9
C10 N27 C22 C19 180.0 180.1
C22 N27 C19 H19 180.2 180.1
N27 C22 C20 C23 179.9 180.1
C20 C22 N27 O30 180.1 179.9
O30 C22 C20 C23 0.0 360.0
C20 C22 O30 N27 179.9 180.1
C11 N29 C23 HN29 180.0 180.0
C20 C23 N29 O31 180.0 180.0
C20 C23 O31 N29 180.0 180.0
O31 C23 N29 HN29 187.3 187.2
C21 O33 C25 C24 179.0 184.9
O33 C25 C24 H25 240.0 240.0
O33 C25 C24 H25A 121.1 120.0
H24 C24 C25 H24A 240.0 240.0
H24 C24 C25 H24B 120.0 119.9
H24A C24 C25 H24B 240.0 239.9
H25 C25 C24 H25A 241.1 240.0
O33 C25 C24 H24 2.9 300.0
O33 C25 C24 H24A 122.9 60.0
O33 C25 C24 H24B 242.9 180.0
C24 C25 O33 H25 120.0 120.0
C24 C25 O33 H25A 238.9 240.0
H25 C25 O33 H25A 118.9 120.0
C5 C1 H1 C10 180.0 180.2
H1 C1 C5 C14 179.8 179.8
H1 C1 C5 H5 359.7 359.8
H1 C1 C10 C2 180.4 180.2
H1 C1 C10 N27 359.8 0.3
C6 C2 H2 C10 180.0 180.0
H2 C2 C6 C14 180.1 180.0
H2 C2 C6 H6 0.1 360.0
H2 C2 C10 N27 0.3 360.0
C4 C3 H3 C11 180.0 180.3
H3 C3 C4 C12 180.0 179.7
H3 C3 C4 H4 360.0 359.7
H3 C3 C11 C8 180.0 180.3
H3 C3 C11 N29 0.1 0.3
H4 C4 C3 C11 179.9 180.0
C3 C4 H4 C12 180.0 180.1
H4 C4 C3 H3 360.0 359.7
H4 C4 C12 C15 180.2 180.0
H4 C4 C12 O32 359.7 360.0
H5 C5 C1 C10 179.7 180.1
C1 C5 H5 C14 180.0 179.9
H5 C5 C1 H1 359.7 359.8
H5 C5 C14 C6 180.0 180.0
H5 C5 C14 F34 0.0 359.9
H6 C6 C2 C10 180.1 180.0
C2 C6 H6 C14 180.0 180.0
H6 C6 C2 H2 0.1 360.0
H6 C6 C14 F34 0.1 0.0
C9 C7 H7 C13 180.0 180.3
H7 C7 C9 N26 180.0 179.8
H7 C7 C9 H9 359.9 359.7
H7 C7 C13 C16 180.2 180.2
H7 C7 C13 O32 359.9 0.2
C11 C8 H8 C15 180.0 180.1
H8 C8 C11 N29 359.7 360.0
H8 C8 C15 C12 180.4 180.0
H8 C8 C15 F35 0.0 0.0
H9 C9 C7 C13 179.9 179.9
C7 C9 H9 N26 180.0 180.1
H9 C9 C7 H7 359.9 359.7
H9 C9 N26 C17 180.0 180.1
C19 C18 H18 C21 180.0 180.2
H18 C18 C19 N27 179.8 179.7
H18 C18 C19 H19 359.8 359.8
H18 C18 C21 C20 180.1 180.2
H18 C18 C21 O33 0.2 0.2
H19 C19 C18 C21 179.8 180.0
C18 C19 H19 N27 180.0 180.0
H19 C19 C18 H18 359.8 359.8
H19 C19 N27 C22 180.2 180.1
H24 C24 C25 O33 2.9 300.0
C25 C24 H24 H24A 120.0 120.0
C25 C24 H24 H24B 240.0 240.0
H24 C24 C25 H25 122.9 60.0
H24 C24 C25 H25A 241.8 180.0
H24A C24 H24 H24B 120.0 120.1
H24A C24 C25 O33 122.9 60.0
C25 C24 H24A H24 240.0 240.0
C25 C24 H24A H24B 120.0 120.0
H24A C24 C25 H25 242.9 180.0
H24A C24 C25 H25A 1.8 300.0
H24 C24 H24A H24B 240.0 240.0
H24B C24 C25 O33 242.9 180.0
C25 C24 H24B H24 120.0 119.9
C25 C24 H24B H24A 240.0 240.0
H24B C24 C25 H25 2.9 300.0
H24B C24 C25 H25A 121.8 60.1
H24 C24 H24B H24A 120.0 120.0
C24 C25 H25 O33 242.3 240.0
H25 C25 C24 H24 122.9 60.0
H25 C25 C24 H24A 242.9 180.0
H25 C25 C24 H24B 2.9 300.0
C24 C25 H25 H25A 121.2 120.0
O33 C25 H25 H25A 238.9 240.0
C24 C25 H25A O33 118.5 120.0
H25A C25 C24 H24 241.8 180.0
H25A C25 C24 H24A 1.8 300.0
H25A C25 C24 H24B 121.8 60.1
C24 C25 H25A H25 239.2 240.0
O33 C25 H25A H25 120.7 120.0
C17 N28 HN28 HN2A 120.0 180.0
C17 N28 HN2A HN28 240.0 180.0
C11 N29 HN29 C23 180.0 180.0
HN29 N29 C23 O31 187.3 187.2