PDB Chemical Component 346

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 346

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
F30 C12 1.349 1.351
C12 C13 1.369 1.390
C12 C11 1.399 1.383
C13 O25 1.384 1.359
C13 C8 1.395 1.386
O25 C26 1.423 1.429
C26 C27 1.523 1.545
C26 C31 1.532 1.544
C26 H26 1.100 1.090
C27 C29 1.518 1.545
C27 H272 1.100 1.090
C27 H271 1.100 1.090
C29 O28 1.434 1.444
C29 H292 1.100 1.090
C29 H291 1.100 1.090
O28 C31 1.437 1.448
C31 H312 1.100 1.091
C31 H311 1.100 1.090
C8 C9 1.402 1.386
C8 H8 1.080 1.080
C9 O23 1.393 1.359
C9 C10 1.402 1.387
O23 C24 1.433 1.429
C24 C30 1.518 1.530
C24 H241 1.100 1.090
C24 H242 1.099 1.090
C30 H303 1.100 1.090
C30 H302 1.101 1.090
C30 H301 1.100 1.090
C10 C11 1.392 1.383
C10 H10 1.080 1.080
C11 C14 1.500 1.507
C14 C15 1.499 1.507
C14 N3 1.473 1.465
C14 H14 1.099 1.090
C15 O2 1.271 1.208
C15 O1 1.282 1.343
O1 H1 0.950 0.968
N3 C1 1.388 1.393
N3 H33 1.000 0.970
C1 C2 1.394 1.391
C1 C6 1.403 1.392
C2 C3 1.366 1.377
C2 H2 1.080 1.080
C3 C4 1.398 1.396
C3 H3 1.080 1.080
C4 C7 1.441 1.478
C4 C5 1.400 1.397
C7 N1 1.361 1.379
C7 N2 1.337 1.304
N1 H12 1.000 0.970
N1 H11 1.000 0.970
N2 H21 1.000 0.969
C5 C6 1.367 1.376
C5 H5 1.080 1.080
C6 H6 1.080 1.080

Bond Angles for 346

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
F30 C12 C13 117.3 120.0
F30 C12 C11 120.1 120.0
C13 C12 C11 122.6 120.0
C12 C13 O25 115.6 120.0
C12 C13 C8 120.0 119.9
C12 C11 C10 117.7 120.1
C12 C11 C14 121.0 120.0
O25 C13 C8 124.4 120.1
C13 O25 C26 116.1 106.8
C13 C8 C9 118.7 119.9
C13 C8 H8 120.7 120.0
O25 C26 C27 107.6 110.6
O25 C26 C31 110.7 110.5
O25 C26 H26 108.7 110.4
C27 C26 C31 105.3 104.2
C27 C26 H26 113.7 110.5
C26 C27 C29 101.8 104.1
C26 C27 H272 113.7 110.5
C26 C27 H271 112.1 110.5
C31 C26 H26 110.8 110.5
C26 C31 O28 106.2 104.6
C26 C31 H312 111.3 110.5
C26 C31 H311 110.6 110.5
C29 C27 H272 113.7 110.5
C29 C27 H271 112.1 110.5
C27 C29 O28 107.2 104.8
C27 C29 H292 110.7 110.3
C27 C29 H291 110.2 110.3
H272 C27 H271 103.7 110.6
O28 C29 H292 110.8 110.4
O28 C29 H291 110.3 110.4
C29 O28 C31 110.0 105.3
H292 C29 H291 107.7 110.5
O28 C31 H312 111.3 110.4
O28 C31 H311 110.6 110.4
H312 C31 H311 106.9 110.4
C9 C8 H8 120.6 120.1
C8 C9 O23 113.4 120.0
C8 C9 C10 120.5 120.0
O23 C9 C10 126.0 120.0
C9 O23 C24 114.2 106.8
C9 C10 C11 120.4 120.0
C9 C10 H10 119.8 120.0
O23 C24 C30 111.1 109.5
O23 C24 H241 108.6 109.5
O23 C24 H242 108.9 109.5
C30 C24 H241 108.6 109.4
C30 C24 H242 108.9 109.5
C24 C30 H303 109.4 109.5
C24 C30 H302 109.5 109.5
C24 C30 H301 109.5 109.5
H241 C24 H242 110.8 109.5
H303 C30 H302 109.5 109.5
H303 C30 H301 109.5 109.4
H302 C30 H301 109.5 109.5
C11 C10 H10 119.8 119.9
C10 C11 C14 121.3 120.0
C11 C14 C15 110.6 109.5
C11 C14 N3 108.8 109.4
C11 C14 H14 109.4 109.5
C15 C14 N3 110.0 109.5
C15 C14 H14 108.1 109.5
C14 C15 O2 115.8 120.1
C14 C15 O1 121.3 120.0
N3 C14 H14 110.0 109.5
C14 N3 C1 123.6 120.0
C14 N3 H33 105.0 120.0
O2 C15 O1 122.9 120.0
C15 O1 H1 109.5 120.0
C1 N3 H33 105.0 120.0
N3 C1 C2 123.0 119.9
N3 C1 C6 118.3 120.0
C2 C1 C6 118.7 120.1
C1 C2 C3 118.5 120.1
C1 C2 H2 120.7 120.0
C1 C6 C5 122.6 120.1
C1 C6 H6 118.7 119.9
C3 C2 H2 120.8 120.0
C2 C3 C4 123.1 120.0
C2 C3 H3 118.5 120.0
C4 C3 H3 118.4 120.0
C3 C4 C7 120.9 120.1
C3 C4 C5 118.4 119.8
C7 C4 C5 120.8 120.1
C4 C7 N1 122.3 120.0
C4 C7 N2 122.1 120.0
C4 C5 C6 118.7 120.0
C4 C5 H5 120.6 120.0
N1 C7 N2 115.6 120.0
C7 N1 H12 125.4 120.0
C7 N1 H11 109.2 120.0
C7 N2 H21 109.2 120.0
H12 N1 H11 125.4 120.0
C6 C5 H5 120.7 120.1
C5 C6 H6 118.7 120.0

Torsion Angles for 346

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C13 C12 F30 C11 179.5 180.0
F30 C12 C13 O25 0.2 360.0
F30 C12 C13 C8 180.2 180.0
F30 C12 C11 C10 179.9 179.8
F30 C12 C11 C14 359.5 0.0
F30 C12 C13 C11 180.5 180.0
C13 C12 C11 C10 0.4 359.8
C13 C12 C11 C14 180.1 180.0
O25 C13 C12 C8 180.0 180.0
C12 C13 O25 C26 181.9 173.7
C12 C13 C8 C9 359.5 0.0
C12 C13 C8 H8 179.5 180.0
F30 C12 C11 C13 179.4 180.0
C11 C12 C13 O25 179.7 180.0
C11 C12 C13 C8 359.7 360.0
C9 C10 C11 C12 0.4 0.5
C12 C11 C10 H10 180.4 180.1
C10 C11 C12 C14 180.3 179.8
C12 C11 C14 C15 244.4 274.4
C12 C11 C14 N3 123.4 154.5
C12 C11 C14 H14 3.3 34.5
O25 C13 C12 C11 179.7 180.0
C12 C13 O25 C8 180.0 180.0
O25 C13 C8 C9 179.5 180.0
O25 C13 C8 H8 359.5 360.0
C13 O25 C26 C27 187.8 202.5
C13 O25 C26 C31 73.2 87.7
C13 O25 C26 H26 311.3 325.1
C8 C13 C12 C11 359.7 360.0
C12 C13 C8 O25 180.0 180.0
C8 C13 O25 C26 1.9 353.7
C9 C8 C13 H8 180.0 180.1
C13 C8 C9 O23 179.0 180.0
C13 C8 C9 C10 1.3 0.2
C26 O25 C13 C8 1.9 353.7
C27 C26 O25 C31 114.6 114.8
C27 C26 O25 H26 236.5 237.4
O25 C26 C27 C29 270.1 241.3
O25 C26 C27 H272 147.3 122.7
O25 C26 C27 H271 30.1 360.0
C31 C26 O25 H26 121.8 122.6
O25 C26 C31 O28 99.0 94.8
O25 C26 C31 H312 337.8 335.9
O25 C26 C31 H311 219.1 213.5
O25 C26 C27 C31 241.9 241.3
O25 C26 C27 H26 120.4 122.6
C31 C26 C27 H26 238.5 241.3
C27 C26 C31 O28 343.0 336.0
C27 C26 C31 H312 221.7 217.2
C27 C26 C31 H311 103.0 94.8
C29 C27 C26 H272 122.7 118.6
C29 C27 C26 H271 240.0 241.3
C26 C27 C29 O28 329.7 24.0
C26 C27 C29 H292 208.8 265.1
C26 C27 C29 H291 89.7 142.8
H272 C27 C26 H271 117.3 122.7
O25 C26 C31 C27 116.0 118.8
O25 C26 C31 H26 239.4 237.5
C27 C26 C31 H26 123.4 118.7
C31 C26 C27 C29 28.2 0.1
C31 C26 C27 H272 265.5 241.4
C31 C26 C27 H271 148.2 118.7
C29 O28 C31 C26 357.7 40.6
O28 C31 C26 H312 121.3 118.8
O28 C31 C26 H311 240.0 241.2
H312 C31 C26 H311 118.7 122.4
O25 C26 H26 C27 240.2 237.4
O25 C26 H26 C31 121.8 122.6
C27 C26 H26 C31 241.6 245.2
H26 C26 C27 C29 149.7 118.8
H26 C26 C27 H272 27.0 0.1
H26 C26 C27 H271 269.7 237.4
H26 C26 C31 O28 219.6 217.3
H26 C26 C31 H312 98.4 98.5
H26 C26 C31 H311 339.7 336.1
C29 C27 C26 C31 28.2 0.1
C29 C27 C26 H26 149.7 118.8
C26 C27 C29 H272 237.3 241.4
C26 C27 C29 H271 120.0 118.6
H272 C27 C29 H271 242.7 237.2
O28 C29 C27 H292 120.9 118.9
O28 C29 C27 H291 240.0 241.2
C27 C29 O28 C31 21.0 319.4
H292 C29 C27 H291 119.1 122.3
H272 C27 C26 C31 265.5 241.4
H272 C27 C26 H26 27.0 0.1
C26 C27 H272 C29 115.9 114.6
C26 C27 H272 H271 238.0 237.3
C29 C27 H272 H271 122.1 122.7
H272 C27 C29 O28 92.4 142.6
H272 C27 C29 H292 331.5 23.7
H272 C27 C29 H291 212.4 261.4
H271 C27 C26 C31 148.2 118.7
H271 C27 C26 H26 269.7 237.4
C26 C27 H271 C29 246.2 245.4
C26 C27 H271 H272 123.1 122.6
C29 C27 H271 H272 236.9 237.3
H271 C27 C29 O28 209.7 265.4
H271 C27 C29 H292 88.8 146.5
H271 C27 C29 H291 329.7 24.2
C26 C31 O28 C29 357.7 40.6
O28 C29 C27 H272 92.4 142.6
O28 C29 C27 H271 209.7 265.4
C27 C29 O28 H292 239.1 241.2
C27 C29 O28 H291 120.0 118.7
H292 C29 O28 H291 240.9 237.6
C29 O28 C31 H312 119.0 159.4
C29 O28 C31 H311 237.7 281.7
H292 C29 C27 H272 331.5 23.7
H292 C29 C27 H271 88.8 146.5
C27 C29 H292 O28 118.8 115.4
C27 C29 H292 H291 239.4 237.8
O28 C29 H292 H291 120.7 122.4
H292 C29 O28 C31 141.9 78.3
H291 C29 C27 H272 212.4 261.4
H291 C29 C27 H271 329.7 24.2
C27 C29 H291 O28 241.9 244.7
C27 C29 H291 H292 120.9 122.3
O28 C29 H291 H292 239.0 237.6
H291 C29 O28 C31 261.0 200.7
O28 C31 C26 H26 219.6 217.3
C26 C31 O28 H312 238.7 241.2
C26 C31 O28 H311 120.0 118.9
C31 O28 C29 H292 141.9 78.3
C31 O28 C29 H291 261.0 200.7
H312 C31 O28 H311 241.3 237.7
H312 C31 C26 H26 98.4 98.5
C26 C31 H312 O28 118.3 115.2
C26 C31 H312 H311 239.1 237.5
O28 C31 H312 H311 120.9 122.3
H311 C31 C26 H26 339.7 336.1
C26 C31 H311 O28 242.6 244.8
C26 C31 H311 H312 121.3 122.5
O28 C31 H311 H312 238.7 237.7
C13 C8 C9 H8 180.0 179.9
O23 C9 C8 C10 177.8 179.8
C8 C9 O23 C24 182.8 360.0
C8 C9 C10 C11 358.8 359.5
C8 C9 C10 H10 178.8 179.9
C13 C8 H8 C9 180.0 180.1
H8 C8 C9 O23 359.0 0.1
H8 C8 C9 C10 181.3 180.3
O23 C9 C8 H8 359.0 0.1
C8 C9 O23 C10 182.4 180.2
O23 C9 C10 C11 181.3 179.8
O23 C9 C10 H10 1.3 0.2
C9 O23 C24 C30 177.9 180.0
C9 O23 C24 H241 58.6 60.0
C9 O23 C24 H242 297.9 300.0
C12 C11 C10 C9 0.4 0.5
C10 C9 C8 H8 181.3 180.3
C8 C9 C10 O23 177.5 179.8
C10 C9 O23 C24 0.4 179.7
C11 C10 C9 H10 180.0 179.6
C9 C10 C11 C14 180.7 180.3
C24 O23 C9 C10 0.4 179.7
C30 C24 O23 H241 119.3 120.0
C30 C24 O23 H242 240.0 240.0
O23 C24 C30 H303 175.5 60.0
O23 C24 C30 H302 55.5 300.0
O23 C24 C30 H301 295.5 180.0
H241 C24 O23 H242 120.7 120.0
O23 C24 C30 H241 240.7 240.0
O23 C24 C30 H242 120.0 120.0
H241 C24 C30 H242 239.3 240.0
H303 C30 C24 H302 120.0 120.0
H303 C30 C24 H301 240.0 240.0
H302 C30 C24 H301 120.0 120.0
O23 C24 H241 C30 120.9 120.0
O23 C24 H241 H242 240.4 240.0
C30 C24 H241 H242 119.6 120.0
H241 C24 C30 H303 294.8 180.0
H241 C24 C30 H302 174.8 60.0
H241 C24 C30 H301 54.8 300.0
O23 C24 H242 C30 238.7 240.0
O23 C24 H242 H241 119.4 120.0
C30 C24 H242 H241 240.7 240.0
H242 C24 C30 H303 55.5 300.0
H242 C24 C30 H302 295.5 180.0
H242 C24 C30 H301 175.5 60.0
H303 C30 C24 H241 294.8 180.0
H303 C30 C24 H242 55.5 300.0
C24 C30 H303 H302 240.0 240.0
C24 C30 H303 H301 120.0 120.0
H302 C30 H303 H301 240.0 240.0
H302 C30 C24 H241 174.8 60.0
H302 C30 C24 H242 295.5 180.0
C24 C30 H302 H303 120.0 120.0
C24 C30 H302 H301 239.9 240.0
H303 C30 H302 H301 120.0 119.9
H301 C30 C24 H241 54.8 300.0
H301 C30 C24 H242 175.5 60.0
C24 C30 H301 H303 240.0 240.0
C24 C30 H301 H302 120.0 120.0
H303 C30 H301 H302 240.0 240.0
C12 C11 C10 C14 179.7 180.2
C9 C10 C11 H10 180.0 180.4
C10 C11 C14 C15 64.0 94.7
C10 C11 C14 N3 303.1 334.7
C10 C11 C14 H14 183.0 214.7
C9 C10 H10 C11 180.0 179.6
H10 C10 C11 C14 0.7 359.8
C12 C11 C14 C10 180.3 179.8
C14 C11 C10 H10 0.7 359.8
C15 C14 C11 N3 120.9 120.0
C15 C14 C11 H14 241.0 240.0
C11 C14 C15 O2 68.8 240.0
C11 C14 C15 O1 247.6 60.0
N3 C14 C11 H14 120.1 120.0
C11 C14 N3 C1 283.0 207.0
C11 C14 N3 H33 43.0 27.1
C11 C14 C15 N3 239.8 240.0
C11 C14 C15 H14 119.7 120.0
N3 C14 C15 H14 239.9 240.0
C15 C14 N3 C1 161.7 87.0
C15 C14 N3 H33 281.7 267.1
O2 C15 C14 O1 181.2 180.0
C14 C15 O1 H1 181.3 180.0
C11 C14 N3 C15 121.3 120.0
C11 C14 N3 H14 240.3 240.0
C15 C14 N3 H14 119.0 120.0
N3 C14 C15 O2 189.0 360.0
N3 C14 C15 O1 7.8 180.0
C1 N3 C14 H33 240.0 179.9
C14 N3 C1 C2 354.1 180.0
C14 N3 C1 C6 174.0 359.7
C11 C14 H14 C15 239.5 240.0
C11 C14 H14 N3 119.4 120.0
C15 C14 H14 N3 239.9 240.0
H14 C14 C15 O2 309.1 120.0
H14 C14 C15 O1 127.9 300.0
H14 C14 N3 C1 42.8 327.0
H14 C14 N3 H33 162.8 147.1
O2 C15 C14 N3 189.0 360.0
O2 C15 C14 H14 309.1 120.0
C14 C15 O2 O1 178.8 180.0
O2 C15 O1 H1 0.0 0.0
O1 C15 C14 N3 7.8 180.0
O1 C15 C14 H14 127.9 300.0
C14 C15 O1 O2 181.3 180.0
C1 N3 C14 H14 42.8 327.0
C14 N3 C1 H33 120.0 180.1
C2 C1 N3 C6 180.1 180.3
N3 C1 C2 C3 180.4 180.0
N3 C1 C2 H2 0.4 360.0
N3 C1 C6 C5 179.2 179.7
N3 C1 C6 H6 359.2 0.3
H33 N3 C14 H14 162.8 147.1
C14 N3 H33 C1 228.3 179.9
H33 N3 C1 C2 234.1 360.0
H33 N3 C1 C6 54.0 179.7
C2 C1 N3 H33 234.1 360.0
N3 C1 C2 C6 179.9 179.7
C2 C1 C6 C5 359.1 359.4
C2 C1 C6 H6 179.1 180.0
C3 C2 C1 H2 180.0 180.0
C1 C2 C3 C4 359.7 360.0
C1 C2 C3 H3 179.7 179.9
C6 C1 N3 H33 54.0 179.7
N3 C1 C6 C2 180.1 180.3
C6 C1 C2 C3 0.4 0.3
C6 C1 C2 H2 180.5 180.3
C4 C5 C6 C1 1.1 0.5
C1 C6 C5 H5 181.1 180.3
C5 C6 C1 H6 180.0 179.5
C3 C2 C1 C6 0.4 0.3
C1 C2 C3 H2 180.0 180.0
C4 C3 C2 H3 180.0 180.1
C2 C3 C4 C7 180.4 180.0
C2 C3 C4 C5 0.5 360.0
H2 C2 C1 C6 180.5 180.3
C1 C2 H2 C3 180.0 180.0
H2 C2 C3 C4 179.7 180.0
H2 C2 C3 H3 359.7 360.0
C4 C3 C2 H2 179.7 180.0
C2 C3 C4 H3 180.0 179.9
C7 C4 C3 C5 179.9 180.0
C3 C4 C7 N1 355.3 180.0
C3 C4 C7 N2 178.4 359.9
C3 C4 C5 C6 359.1 359.8
C3 C4 C5 H5 179.1 180.0
H3 C3 C2 H2 359.7 360.0
C2 C3 H3 C4 180.0 180.1
H3 C3 C4 C7 0.4 0.1
H3 C3 C4 C5 180.5 180.0
C7 C4 C3 H3 0.4 0.1
C3 C4 C7 C5 180.1 180.0
C7 C4 C5 C6 179.2 179.8
C7 C4 C5 H5 359.3 359.9
N1 C7 C4 N2 176.9 180.0
C4 C7 N1 H12 360.0 180.0
C4 C7 N1 H11 180.0 0.0
C4 C7 N2 H21 358.3 180.0
C1 C6 C5 C4 1.1 0.5
C5 C4 C3 H3 180.5 180.0
C3 C4 C5 C7 179.9 180.0
C5 C4 C7 N1 175.1 0.0
C5 C4 C7 N2 358.2 180.0
C6 C5 C4 H5 180.0 179.8
C4 C5 C6 H6 181.1 180.0
N1 C7 C4 C5 175.1 0.0
C4 C7 N1 N2 182.9 180.0
N1 C7 N2 H21 181.3 359.9
H12 N1 C7 H11 180.0 180.0
N2 C7 C4 C5 358.2 180.0
C4 C7 N2 N1 177.1 180.0
N2 C7 N1 H12 177.0 0.0
N2 C7 N1 H11 357.1 180.1
H12 N1 C7 N2 177.0 0.0
C7 N1 H12 H11 180.0 180.0
H11 N1 C7 N2 357.1 180.1
C7 N1 H11 H12 180.0 180.0
C1 C6 C5 H6 180.0 180.5
C4 C5 C6 H5 180.0 180.2
C4 C5 H5 C6 180.0 179.8
H5 C5 C6 H6 1.1 359.8
C1 C6 H6 C5 180.0 179.5
H6 C6 C5 H5 1.1 359.8