PDB Chemical Component 338
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 338
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.434 |
1.385 |
C1 |
C6 |
1.438 |
1.392 |
C1 |
O30 |
1.382 |
1.359 |
C2 |
C3 |
1.420 |
1.385 |
C2 |
H2 |
1.103 |
1.080 |
C3 |
C4 |
1.406 |
1.405 |
C3 |
O10 |
1.347 |
1.352 |
C4 |
C5 |
1.429 |
1.398 |
C4 |
N12 |
1.386 |
1.358 |
C5 |
C6 |
1.435 |
1.366 |
C5 |
H5 |
1.103 |
1.080 |
C6 |
H6 |
1.103 |
1.080 |
O10 |
C11 |
1.372 |
1.348 |
C11 |
N12 |
1.400 |
1.310 |
C11 |
C13 |
1.423 |
1.474 |
C13 |
C15 |
1.496 |
1.418 |
C13 |
C19 |
1.450 |
1.387 |
C15 |
C16 |
1.497 |
1.415 |
C15 |
C23 |
1.448 |
1.401 |
C16 |
C17 |
1.435 |
1.404 |
C16 |
C26 |
1.444 |
1.411 |
C17 |
C18 |
1.424 |
1.363 |
C17 |
H17 |
1.102 |
1.080 |
C18 |
C19 |
1.423 |
1.388 |
C18 |
H18 |
1.103 |
1.080 |
C19 |
H19 |
1.103 |
1.080 |
C23 |
C24 |
1.431 |
1.363 |
C23 |
H23 |
1.103 |
1.081 |
C24 |
C25 |
1.431 |
1.392 |
C24 |
H24 |
1.103 |
1.080 |
C25 |
C26 |
1.429 |
1.376 |
C25 |
H25 |
1.103 |
1.080 |
C26 |
O31 |
1.384 |
1.358 |
O30 |
H30 |
0.951 |
0.967 |
O31 |
H31 |
0.949 |
0.967 |
Bond Angles for 338
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C6 |
121.2 |
120.4 |
C2 |
C1 |
O30 |
119.9 |
119.8 |
C1 |
C2 |
C3 |
117.8 |
119.7 |
C1 |
C2 |
H2 |
121.6 |
120.2 |
C6 |
C1 |
O30 |
119.0 |
119.8 |
C1 |
C6 |
C5 |
120.1 |
120.5 |
C1 |
C6 |
H6 |
120.0 |
119.8 |
C1 |
O30 |
H30 |
119.9 |
106.8 |
C3 |
C2 |
H2 |
120.7 |
120.1 |
C2 |
C3 |
C4 |
121.4 |
119.8 |
C2 |
C3 |
O10 |
128.2 |
133.8 |
C4 |
C3 |
O10 |
110.4 |
106.4 |
C3 |
C4 |
C5 |
121.9 |
119.7 |
C3 |
C4 |
N12 |
107.9 |
106.7 |
C3 |
O10 |
C11 |
105.3 |
108.1 |
C5 |
C4 |
N12 |
130.2 |
133.6 |
C4 |
C5 |
C6 |
117.7 |
119.9 |
C4 |
C5 |
H5 |
121.0 |
120.0 |
C4 |
N12 |
C11 |
104.2 |
108.8 |
C6 |
C5 |
H5 |
121.4 |
120.0 |
C5 |
C6 |
H6 |
119.9 |
119.7 |
O10 |
C11 |
N12 |
112.2 |
110.0 |
O10 |
C11 |
C13 |
123.8 |
125.0 |
N12 |
C11 |
C13 |
124.0 |
125.0 |
C11 |
C13 |
C15 |
126.9 |
120.4 |
C11 |
C13 |
C19 |
115.8 |
120.4 |
C15 |
C13 |
C19 |
117.4 |
119.2 |
C13 |
C15 |
C16 |
118.6 |
119.2 |
C13 |
C15 |
C23 |
125.0 |
121.2 |
C13 |
C19 |
C18 |
123.0 |
120.6 |
C13 |
C19 |
H19 |
119.4 |
119.6 |
C16 |
C15 |
C23 |
116.4 |
119.6 |
C15 |
C16 |
C17 |
119.8 |
119.6 |
C15 |
C16 |
C26 |
120.7 |
119.3 |
C15 |
C23 |
C24 |
122.2 |
120.0 |
C15 |
C23 |
H23 |
119.5 |
120.0 |
C17 |
C16 |
C26 |
119.4 |
121.2 |
C16 |
C17 |
C18 |
121.1 |
120.2 |
C16 |
C17 |
H17 |
119.9 |
119.9 |
C16 |
C26 |
C25 |
119.9 |
119.5 |
C16 |
C26 |
O31 |
121.5 |
120.3 |
C18 |
C17 |
H17 |
119.0 |
120.0 |
C17 |
C18 |
C19 |
120.1 |
121.2 |
C17 |
C18 |
H18 |
120.0 |
119.4 |
C19 |
C18 |
H18 |
119.9 |
119.4 |
C18 |
C19 |
H19 |
117.6 |
119.7 |
C24 |
C23 |
H23 |
118.3 |
120.0 |
C23 |
C24 |
C25 |
120.1 |
121.0 |
C23 |
C24 |
H24 |
119.9 |
119.5 |
C25 |
C24 |
H24 |
120.0 |
119.5 |
C24 |
C25 |
C26 |
120.7 |
120.7 |
C24 |
C25 |
H25 |
119.7 |
119.6 |
C26 |
C25 |
H25 |
119.6 |
119.7 |
C25 |
C26 |
O31 |
118.6 |
120.3 |
C26 |
O31 |
H31 |
121.5 |
106.8 |
Torsion Angles for 338
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
C1 |
C2 |
O30 |
180.3 |
179.8 |
C2 |
C1 |
C6 |
C5 |
359.8 |
0.2 |
C2 |
C1 |
C6 |
H6 |
179.8 |
180.2 |
C2 |
C1 |
O30 |
H30 |
180.0 |
269.8 |
C3 |
C2 |
C1 |
H2 |
180.0 |
179.9 |
C1 |
C2 |
C3 |
C4 |
359.5 |
0.5 |
C1 |
C2 |
C3 |
O10 |
180.1 |
180.2 |
C2 |
C1 |
C6 |
O30 |
179.7 |
180.2 |
C6 |
C1 |
C2 |
C3 |
0.3 |
359.5 |
C6 |
C1 |
C2 |
H2 |
180.3 |
179.6 |
C6 |
C1 |
O30 |
H30 |
359.7 |
89.9 |
C4 |
C5 |
C6 |
C1 |
0.3 |
360.0 |
C1 |
C6 |
C5 |
H5 |
180.4 |
180.0 |
C5 |
C6 |
C1 |
H6 |
180.0 |
180.0 |
C2 |
C1 |
O30 |
C6 |
180.3 |
179.8 |
O30 |
C1 |
C2 |
C3 |
180.0 |
179.7 |
O30 |
C1 |
C2 |
H2 |
360.0 |
359.8 |
O30 |
C1 |
C6 |
C5 |
180.1 |
180.1 |
O30 |
C1 |
C6 |
H6 |
0.1 |
0.1 |
C3 |
C2 |
C1 |
C6 |
0.3 |
359.5 |
C3 |
C2 |
C1 |
O30 |
180.0 |
179.7 |
C1 |
C2 |
C3 |
H2 |
180.0 |
180.1 |
C4 |
C3 |
C2 |
O10 |
179.4 |
180.3 |
C2 |
C3 |
C4 |
C5 |
0.6 |
359.7 |
C2 |
C3 |
C4 |
N12 |
180.3 |
179.8 |
C2 |
C3 |
O10 |
C11 |
179.5 |
180.2 |
H2 |
C2 |
C1 |
C6 |
180.3 |
179.6 |
H2 |
C2 |
C1 |
O30 |
360.0 |
359.8 |
C1 |
C2 |
H2 |
C3 |
180.0 |
179.9 |
H2 |
C2 |
C3 |
C4 |
179.5 |
180.4 |
H2 |
C2 |
C3 |
O10 |
0.2 |
0.1 |
C4 |
C3 |
C2 |
H2 |
179.5 |
180.4 |
C2 |
C3 |
C4 |
O10 |
180.5 |
179.8 |
C4 |
C3 |
O10 |
C11 |
0.1 |
360.0 |
C5 |
C4 |
C3 |
N12 |
180.3 |
180.0 |
C3 |
C4 |
C5 |
C6 |
359.5 |
0.0 |
C3 |
C4 |
C5 |
H5 |
179.4 |
180.0 |
C3 |
C4 |
N12 |
C11 |
0.2 |
0.0 |
O10 |
C3 |
C2 |
H2 |
0.2 |
0.1 |
C2 |
C3 |
O10 |
C4 |
179.4 |
180.3 |
O10 |
C3 |
C4 |
C5 |
180.1 |
180.0 |
O10 |
C3 |
C4 |
N12 |
359.8 |
0.0 |
C3 |
O10 |
C11 |
N12 |
0.1 |
0.1 |
C3 |
O10 |
C11 |
C13 |
180.3 |
180.0 |
C1 |
C6 |
C5 |
C4 |
0.3 |
360.0 |
C5 |
C4 |
C3 |
O10 |
180.1 |
180.0 |
C3 |
C4 |
C5 |
N12 |
179.6 |
180.1 |
C5 |
C4 |
N12 |
C11 |
179.9 |
180.1 |
C6 |
C5 |
C4 |
H5 |
180.1 |
180.1 |
C4 |
C5 |
C6 |
H6 |
180.3 |
180.0 |
N12 |
C4 |
C3 |
O10 |
359.8 |
0.0 |
C3 |
C4 |
N12 |
C5 |
180.3 |
180.0 |
N12 |
C4 |
C5 |
C6 |
179.9 |
180.0 |
N12 |
C4 |
C5 |
H5 |
359.8 |
359.9 |
O10 |
C11 |
N12 |
C4 |
359.8 |
359.9 |
C4 |
N12 |
C11 |
C13 |
179.6 |
180.0 |
C5 |
C6 |
C1 |
O30 |
180.1 |
180.1 |
C1 |
C6 |
C5 |
H6 |
180.0 |
180.0 |
C6 |
C5 |
C4 |
N12 |
179.9 |
180.0 |
C4 |
C5 |
C6 |
H5 |
179.9 |
179.9 |
H5 |
C5 |
C4 |
N12 |
359.8 |
359.9 |
C4 |
C5 |
H5 |
C6 |
180.1 |
180.1 |
H5 |
C5 |
C6 |
H6 |
0.3 |
0.0 |
H6 |
C6 |
C1 |
O30 |
0.1 |
0.1 |
C1 |
C6 |
H6 |
C5 |
180.0 |
180.0 |
H6 |
C6 |
C5 |
H5 |
0.3 |
0.0 |
C4 |
N12 |
C11 |
O10 |
359.8 |
359.9 |
N12 |
C11 |
O10 |
C13 |
179.8 |
180.0 |
O10 |
C11 |
C13 |
C15 |
192.7 |
227.1 |
O10 |
C11 |
C13 |
C19 |
13.1 |
47.3 |
O10 |
C11 |
N12 |
C13 |
180.2 |
180.0 |
N12 |
C11 |
C13 |
C15 |
13.0 |
47.0 |
N12 |
C11 |
C13 |
C19 |
193.3 |
227.3 |
O10 |
C11 |
C13 |
N12 |
179.7 |
180.0 |
C15 |
C13 |
C11 |
C19 |
179.6 |
179.7 |
C11 |
C13 |
C15 |
C16 |
180.2 |
179.8 |
C11 |
C13 |
C15 |
C23 |
0.2 |
0.6 |
C11 |
C13 |
C19 |
C18 |
179.8 |
180.0 |
C11 |
C13 |
C19 |
H19 |
359.8 |
360.0 |
C11 |
C13 |
C15 |
C19 |
180.4 |
180.2 |
C15 |
C13 |
C19 |
C18 |
0.1 |
0.2 |
C15 |
C13 |
C19 |
H19 |
180.1 |
180.2 |
C16 |
C15 |
C13 |
C23 |
180.0 |
179.1 |
C13 |
C15 |
C16 |
C17 |
0.2 |
0.5 |
C13 |
C15 |
C16 |
C26 |
179.8 |
180.3 |
C13 |
C15 |
C23 |
C24 |
180.1 |
179.8 |
C13 |
C15 |
C23 |
H23 |
0.1 |
359.4 |
C11 |
C13 |
C19 |
C15 |
179.7 |
179.8 |
C19 |
C13 |
C15 |
C16 |
359.9 |
359.5 |
C19 |
C13 |
C15 |
C23 |
179.9 |
180.4 |
C17 |
C18 |
C19 |
C13 |
359.9 |
0.0 |
C13 |
C19 |
C18 |
H18 |
179.8 |
180.0 |
C18 |
C19 |
C13 |
H19 |
180.0 |
180.0 |
C16 |
C15 |
C13 |
C19 |
359.9 |
359.5 |
C13 |
C15 |
C16 |
C23 |
180.0 |
180.9 |
C16 |
C15 |
C23 |
C24 |
0.1 |
0.6 |
C16 |
C15 |
C23 |
H23 |
180.2 |
180.3 |
C17 |
C16 |
C15 |
C26 |
180.3 |
180.2 |
C15 |
C16 |
C17 |
C18 |
359.8 |
359.7 |
C15 |
C16 |
C17 |
H17 |
179.9 |
179.7 |
C15 |
C16 |
C26 |
C25 |
0.2 |
0.3 |
C15 |
C16 |
C26 |
O31 |
180.1 |
180.3 |
C23 |
C15 |
C13 |
C19 |
179.9 |
180.4 |
C13 |
C15 |
C23 |
C16 |
180.0 |
179.1 |
C23 |
C15 |
C16 |
C17 |
180.2 |
179.6 |
C23 |
C15 |
C16 |
C26 |
359.8 |
359.4 |
C24 |
C23 |
C15 |
H23 |
180.0 |
180.4 |
C15 |
C23 |
C24 |
C25 |
359.9 |
359.6 |
C15 |
C23 |
C24 |
H24 |
180.0 |
179.7 |
C17 |
C16 |
C15 |
C23 |
180.2 |
179.6 |
C15 |
C16 |
C17 |
C26 |
179.7 |
179.8 |
C17 |
C16 |
C26 |
C25 |
179.8 |
180.0 |
C17 |
C16 |
C26 |
O31 |
359.7 |
0.1 |
C18 |
C17 |
C16 |
H17 |
180.0 |
180.1 |
C16 |
C17 |
C18 |
C19 |
0.2 |
360.0 |
C16 |
C17 |
C18 |
H18 |
180.2 |
180.0 |
C26 |
C16 |
C15 |
C23 |
359.8 |
359.4 |
C15 |
C16 |
C26 |
C17 |
180.3 |
180.2 |
C26 |
C16 |
C17 |
C18 |
180.2 |
180.0 |
C26 |
C16 |
C17 |
H17 |
0.2 |
359.9 |
C24 |
C25 |
C26 |
C16 |
359.9 |
360.0 |
C16 |
C26 |
C25 |
H25 |
179.8 |
180.0 |
C25 |
C26 |
C16 |
O31 |
180.1 |
180.0 |
C16 |
C26 |
O31 |
H31 |
180.0 |
90.0 |
C13 |
C19 |
C18 |
C17 |
359.9 |
0.0 |
C18 |
C17 |
C16 |
C26 |
180.2 |
180.0 |
C16 |
C17 |
C18 |
H17 |
180.0 |
179.9 |
C19 |
C18 |
C17 |
H18 |
180.0 |
180.0 |
C17 |
C18 |
C19 |
H19 |
179.9 |
180.0 |
H17 |
C17 |
C16 |
C26 |
0.2 |
359.9 |
C16 |
C17 |
H17 |
C18 |
180.0 |
180.1 |
H17 |
C17 |
C18 |
C19 |
180.1 |
180.0 |
H17 |
C17 |
C18 |
H18 |
0.1 |
0.1 |
C13 |
C19 |
C18 |
H19 |
180.0 |
180.0 |
C19 |
C18 |
C17 |
H17 |
180.1 |
180.0 |
C17 |
C18 |
C19 |
H18 |
180.0 |
180.0 |
H18 |
C18 |
C17 |
H17 |
0.1 |
0.1 |
C17 |
C18 |
H18 |
C19 |
180.0 |
180.0 |
H18 |
C18 |
C19 |
H19 |
359.8 |
360.0 |
C13 |
C19 |
H19 |
C18 |
180.0 |
180.0 |
H19 |
C19 |
C18 |
H18 |
359.8 |
360.0 |
C15 |
C23 |
C24 |
H23 |
180.0 |
179.6 |
C25 |
C24 |
C23 |
H24 |
180.0 |
179.9 |
C23 |
C24 |
C25 |
C26 |
0.0 |
0.1 |
C23 |
C24 |
C25 |
H25 |
180.1 |
180.0 |
C15 |
C23 |
H23 |
C24 |
180.0 |
180.4 |
H23 |
C23 |
C24 |
C25 |
179.9 |
180.0 |
H23 |
C23 |
C24 |
H24 |
359.9 |
0.1 |
C16 |
C26 |
C25 |
C24 |
359.9 |
360.0 |
C25 |
C24 |
C23 |
H23 |
179.9 |
180.0 |
C23 |
C24 |
C25 |
H24 |
180.0 |
180.1 |
C26 |
C25 |
C24 |
H25 |
180.0 |
180.1 |
C24 |
C25 |
C26 |
O31 |
180.0 |
180.0 |
H24 |
C24 |
C23 |
H23 |
359.9 |
0.1 |
C23 |
C24 |
H24 |
C25 |
180.0 |
179.9 |
H24 |
C24 |
C25 |
C26 |
180.0 |
180.0 |
H24 |
C24 |
C25 |
H25 |
0.1 |
359.9 |
C16 |
C26 |
C25 |
O31 |
179.9 |
180.0 |
C26 |
C25 |
C24 |
H24 |
180.0 |
180.0 |
C24 |
C25 |
C26 |
H25 |
180.0 |
179.9 |
C25 |
C26 |
O31 |
H31 |
359.9 |
270.0 |
H25 |
C25 |
C24 |
H24 |
0.1 |
359.9 |
C24 |
C25 |
H25 |
C26 |
180.0 |
180.1 |
H25 |
C25 |
C26 |
O31 |
360.0 |
0.0 |
C16 |
C26 |
O31 |
C25 |
180.1 |
180.0 |
O31 |
C26 |
C25 |
H25 |
360.0 |
0.0 |