PDB Chemical Component 300
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 300
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.410 |
1.376 |
C1 |
C6 |
1.444 |
1.400 |
C1 |
H1 |
1.104 |
1.080 |
C2 |
C3 |
1.414 |
1.385 |
C2 |
H2 |
1.103 |
1.080 |
C3 |
C4 |
1.429 |
1.385 |
C3 |
H3 |
1.102 |
1.080 |
C4 |
C5 |
1.437 |
1.391 |
C4 |
O12 |
1.409 |
1.359 |
C5 |
C6 |
1.443 |
1.404 |
C5 |
O11 |
1.428 |
1.355 |
C6 |
C10 |
1.512 |
1.467 |
C10 |
O21 |
0.981 |
1.213 |
C10 |
H10 |
1.104 |
1.080 |
O11 |
P17 |
1.549 |
1.609 |
O12 |
C13 |
1.435 |
1.429 |
C13 |
H131 |
1.115 |
1.089 |
C13 |
H132 |
1.115 |
1.090 |
C13 |
H133 |
1.115 |
1.090 |
P17 |
O18 |
1.515 |
1.610 |
P17 |
O19 |
1.552 |
1.480 |
P17 |
O20 |
1.498 |
1.610 |
O18 |
H18 |
0.950 |
0.967 |
O20 |
H20 |
0.950 |
0.967 |
Bond Angles for 300
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C6 |
122.9 |
120.0 |
C2 |
C1 |
H1 |
117.3 |
120.0 |
C1 |
C2 |
C3 |
118.3 |
120.4 |
C1 |
C2 |
H2 |
120.7 |
119.9 |
C6 |
C1 |
H1 |
119.8 |
120.0 |
C1 |
C6 |
C5 |
117.2 |
119.6 |
C1 |
C6 |
C10 |
113.2 |
120.2 |
C3 |
C2 |
H2 |
121.0 |
119.8 |
C2 |
C3 |
C4 |
121.8 |
120.4 |
C2 |
C3 |
H3 |
118.5 |
119.8 |
C4 |
C3 |
H3 |
119.7 |
119.8 |
C3 |
C4 |
C5 |
119.1 |
120.0 |
C3 |
C4 |
O12 |
119.2 |
120.0 |
C5 |
C4 |
O12 |
121.6 |
120.0 |
C4 |
C5 |
C6 |
120.5 |
119.6 |
C4 |
C5 |
O11 |
116.8 |
120.2 |
C4 |
O12 |
C13 |
118.3 |
106.9 |
C6 |
C5 |
O11 |
122.6 |
120.2 |
C5 |
C6 |
C10 |
129.4 |
120.2 |
C5 |
O11 |
P17 |
120.5 |
106.8 |
C6 |
C10 |
O21 |
129.4 |
120.0 |
C6 |
C10 |
H10 |
139.6 |
120.0 |
O21 |
C10 |
H10 |
91.0 |
119.9 |
O11 |
P17 |
O18 |
107.6 |
109.6 |
O11 |
P17 |
O19 |
104.5 |
109.4 |
O11 |
P17 |
O20 |
112.0 |
109.5 |
O12 |
C13 |
H131 |
118.2 |
109.5 |
O12 |
C13 |
H132 |
109.0 |
109.5 |
O12 |
C13 |
H133 |
109.0 |
109.5 |
H131 |
C13 |
H132 |
109.1 |
109.5 |
H131 |
C13 |
H133 |
109.1 |
109.5 |
H132 |
C13 |
H133 |
101.0 |
109.5 |
O18 |
P17 |
O19 |
110.5 |
109.5 |
O18 |
P17 |
O20 |
111.4 |
109.4 |
P17 |
O18 |
H18 |
107.7 |
106.8 |
O19 |
P17 |
O20 |
110.5 |
109.4 |
P17 |
O20 |
H20 |
112.0 |
106.8 |
Torsion Angles for 300
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
C1 |
C2 |
H1 |
180.0 |
179.9 |
C2 |
C1 |
C6 |
C5 |
354.7 |
359.8 |
C2 |
C1 |
C6 |
C10 |
170.1 |
180.0 |
C3 |
C2 |
C1 |
H2 |
180.0 |
180.0 |
C1 |
C2 |
C3 |
C4 |
2.6 |
0.1 |
C1 |
C2 |
C3 |
H3 |
182.5 |
180.0 |
C2 |
C1 |
C6 |
H1 |
180.0 |
180.1 |
C6 |
C1 |
C2 |
C3 |
2.0 |
359.9 |
C6 |
C1 |
C2 |
H2 |
181.9 |
179.9 |
C4 |
C5 |
C6 |
C1 |
4.3 |
0.6 |
C1 |
C6 |
C5 |
O11 |
187.1 |
179.9 |
C5 |
C6 |
C1 |
C10 |
184.6 |
179.7 |
C1 |
C6 |
C10 |
O21 |
257.7 |
0.1 |
C1 |
C6 |
C10 |
H10 |
77.7 |
180.0 |
C2 |
C1 |
H1 |
C6 |
180.0 |
179.9 |
H1 |
C1 |
C2 |
C3 |
182.0 |
180.0 |
H1 |
C1 |
C2 |
H2 |
1.9 |
360.0 |
H1 |
C1 |
C6 |
C5 |
174.7 |
179.7 |
H1 |
C1 |
C6 |
C10 |
350.1 |
360.0 |
C3 |
C2 |
C1 |
C6 |
2.0 |
359.9 |
C3 |
C2 |
C1 |
H1 |
182.0 |
180.0 |
C1 |
C2 |
C3 |
H2 |
180.0 |
180.0 |
C4 |
C3 |
C2 |
H3 |
180.0 |
180.1 |
C2 |
C3 |
C4 |
C5 |
356.5 |
0.3 |
C2 |
C3 |
C4 |
O12 |
172.7 |
179.9 |
H2 |
C2 |
C1 |
C6 |
181.9 |
179.9 |
H2 |
C2 |
C1 |
H1 |
1.9 |
360.0 |
C1 |
C2 |
H2 |
C3 |
180.0 |
180.0 |
H2 |
C2 |
C3 |
C4 |
182.6 |
180.1 |
H2 |
C2 |
C3 |
H3 |
2.6 |
0.0 |
C4 |
C3 |
C2 |
H2 |
182.6 |
180.1 |
C2 |
C3 |
C4 |
H3 |
180.0 |
179.9 |
C5 |
C4 |
C3 |
O12 |
183.8 |
180.3 |
C3 |
C4 |
C5 |
C6 |
359.9 |
359.4 |
C3 |
C4 |
C5 |
O11 |
177.2 |
180.1 |
C3 |
C4 |
O12 |
C13 |
340.3 |
360.0 |
H3 |
C3 |
C2 |
H2 |
2.6 |
0.0 |
C2 |
C3 |
H3 |
C4 |
180.0 |
180.1 |
H3 |
C3 |
C4 |
C5 |
176.5 |
180.3 |
H3 |
C3 |
C4 |
O12 |
352.7 |
0.0 |
C1 |
C6 |
C5 |
C4 |
4.3 |
0.6 |
C5 |
C4 |
C3 |
H3 |
176.5 |
180.3 |
C3 |
C4 |
C5 |
O12 |
176.1 |
179.7 |
C5 |
C4 |
O12 |
C13 |
156.4 |
179.7 |
C6 |
C5 |
C4 |
O11 |
182.7 |
179.3 |
C4 |
C5 |
C6 |
C10 |
189.7 |
180.3 |
C4 |
C5 |
O11 |
P17 |
92.2 |
269.4 |
O12 |
C4 |
C3 |
H3 |
352.7 |
0.0 |
C3 |
C4 |
O12 |
C5 |
183.9 |
180.3 |
O12 |
C4 |
C5 |
C6 |
183.8 |
179.7 |
O12 |
C4 |
C5 |
O11 |
1.1 |
0.4 |
C4 |
O12 |
C13 |
H131 |
180.1 |
180.0 |
C4 |
O12 |
C13 |
H132 |
305.3 |
300.0 |
C4 |
O12 |
C13 |
H133 |
54.7 |
60.0 |
C5 |
C6 |
C1 |
H1 |
174.7 |
179.7 |
C1 |
C6 |
C5 |
C10 |
174.5 |
180.3 |
C6 |
C5 |
C4 |
O12 |
183.8 |
179.7 |
C4 |
C5 |
C6 |
O11 |
177.1 |
180.7 |
C6 |
C5 |
O11 |
P17 |
269.5 |
90.0 |
C5 |
C6 |
C10 |
O21 |
72.4 |
180.3 |
C5 |
C6 |
C10 |
H10 |
252.4 |
0.3 |
O11 |
C5 |
C4 |
O12 |
1.1 |
0.4 |
C4 |
C5 |
O11 |
C6 |
182.8 |
179.3 |
O11 |
C5 |
C6 |
C10 |
12.6 |
359.7 |
C5 |
O11 |
P17 |
O18 |
162.4 |
180.0 |
C5 |
O11 |
P17 |
O19 |
44.9 |
60.0 |
C5 |
O11 |
P17 |
O20 |
285.2 |
300.0 |
C10 |
C6 |
C1 |
H1 |
350.1 |
360.0 |
C1 |
C6 |
C10 |
C5 |
185.3 |
179.7 |
C10 |
C6 |
C5 |
O11 |
12.6 |
359.7 |
O21 |
C10 |
C6 |
H10 |
180.0 |
180.0 |
C6 |
C10 |
O21 |
H10 |
180.0 |
180.0 |
C6 |
C10 |
H10 |
O21 |
180.0 |
180.0 |
O18 |
P17 |
O11 |
O19 |
117.5 |
120.0 |
O18 |
P17 |
O11 |
O20 |
237.2 |
240.0 |
O11 |
P17 |
O18 |
H18 |
180.1 |
180.1 |
O19 |
P17 |
O11 |
O20 |
119.7 |
119.9 |
O11 |
P17 |
O20 |
H20 |
180.0 |
300.0 |
H131 |
C13 |
O12 |
H132 |
234.8 |
240.0 |
H131 |
C13 |
O12 |
H133 |
125.3 |
120.0 |
H132 |
C13 |
O12 |
H133 |
250.6 |
240.0 |
O12 |
C13 |
H131 |
H132 |
125.2 |
120.0 |
O12 |
C13 |
H131 |
H133 |
234.7 |
240.0 |
H132 |
C13 |
H131 |
H133 |
109.5 |
120.0 |
O12 |
C13 |
H132 |
H131 |
229.6 |
240.0 |
O12 |
C13 |
H132 |
H133 |
114.7 |
120.0 |
H131 |
C13 |
H132 |
H133 |
245.1 |
240.0 |
O12 |
C13 |
H133 |
H131 |
130.5 |
120.0 |
O12 |
C13 |
H133 |
H132 |
245.3 |
240.0 |
H131 |
C13 |
H133 |
H132 |
114.8 |
120.0 |
O11 |
P17 |
O18 |
O19 |
246.4 |
240.0 |
O11 |
P17 |
O18 |
O20 |
123.2 |
120.0 |
O19 |
P17 |
O18 |
O20 |
236.8 |
240.1 |
O18 |
P17 |
O20 |
H20 |
300.6 |
60.1 |
O11 |
P17 |
O19 |
O18 |
115.5 |
120.1 |
O11 |
P17 |
O19 |
O20 |
239.3 |
240.0 |
O18 |
P17 |
O19 |
O20 |
123.8 |
120.0 |
O19 |
P17 |
O18 |
H18 |
293.6 |
300.1 |
O19 |
P17 |
O20 |
H20 |
63.9 |
180.0 |
O11 |
P17 |
O20 |
O18 |
239.4 |
239.9 |
O11 |
P17 |
O20 |
O19 |
116.1 |
119.9 |
O18 |
P17 |
O20 |
O19 |
236.7 |
240.0 |
O20 |
P17 |
O18 |
H18 |
56.9 |
60.0 |
H18 |
O18 |
P17 |
O19 |
293.6 |
300.1 |
H18 |
O18 |
P17 |
O20 |
56.9 |
60.0 |