PDB Chemical Component 2X5

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 2X5

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
O2	C3	1.424	1.429
O2	C1	1.427	1.428
C3	C4	1.549	1.530
C4	O7	1.422	1.429
C4	C5	1.557	1.537
C18	O17	1.428	1.444
C18	C10	1.550	1.541
C1	C6	1.548	1.531
O7	C8	1.376	1.359
C6	C5	1.550	1.531
C8	C11	1.419	1.392
C8	C9	1.425	1.388
O17	C16	1.355	1.349
C5	C10	1.541	1.523
C11	C12	1.418	1.378
C10	C9	1.537	1.501
C10	N15	1.461	1.469
C9	C14	1.415	1.382
C12	C13	1.421	1.393
C14	C13	1.421	1.392
C24	N23	1.351	1.317
C24	C19	1.421	1.394
C13	C19	1.416	1.484
C16	N15	1.333	1.299
C16	N25	1.338	1.374
N23	C22	1.350	1.320
C19	C20	1.419	1.397
C22	C21	1.415	1.384
C20	C21	1.418	1.386
C21	CL1	1.711	1.735
C1	H1	1.100	1.090
C1	H2	1.100	1.089
C3	H3	1.100	1.090
C3	H4	1.099	1.090
C4	H5	1.100	1.090
C5	H6	1.100	1.090
C6	H7	1.100	1.090
C6	H8	1.101	1.090
C11	H9	1.080	1.080
C12	H10	1.080	1.079
C14	H11	1.080	1.080
C18	H12	1.100	1.090
C18	H13	1.100	1.090
C20	H14	1.080	1.080
C22	H15	1.080	1.080
C24	H16	1.080	1.080
N25	H17	1.000	0.970
N25	H18	1.000	0.970

Bond Angles for 2X5

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O2	C3	C4	108.1	109.4
O2	C3	H3	109.8	109.5
O2	C3	H4	109.8	109.5
O2	C1	C6	108.8	109.4
O2	C1	H1	109.6	109.5
O2	C1	H2	109.6	109.5
C3	C4	O7	107.5	109.7
C3	C4	C5	110.5	109.0
C4	C3	H3	109.8	109.5
C4	C3	H4	109.8	109.5
C3	C4	H5	108.9	109.7
C5	C4	O7	110.5	108.2
C4	O7	C8	118.6	118.0
O7	C4	H5	110.7	109.7
C4	C5	C10	112.2	108.1
C5	C4	H5	108.8	110.4
C4	C5	H6	104.8	109.7
C1	C6	C5	109.8	109.1
C6	C1	H1	109.6	109.4
C6	C1	H2	109.6	109.5
C1	C6	H7	109.4	109.6
C1	C6	H8	109.4	109.5
O7	C8	C11	118.3	118.5
O7	C8	C9	121.5	121.6
C6	C5	C10	116.7	110.0
C6	C5	H6	105.0	110.4
C9	C8	C11	120.2	119.9
C8	C11	C12	120.8	120.4
C8	C11	H9	119.6	119.8
C8	C9	C14	118.7	119.8
O17	C16	N25	119.0	123.0
C5	C10	C9	110.0	111.0
C5	C10	N15	108.8	111.0
C10	C5	H6	105.1	109.7
C11	C12	C13	119.1	119.8
C12	C11	H9	119.6	119.8
C11	C12	H10	120.4	120.1
C10	C9	C14	119.3	119.3
C9	C14	C13	121.2	120.3
C9	C14	H11	119.4	119.8
C12	C13	C19	122.6	120.1
C13	C12	H10	120.4	120.1
C14	C13	C19	117.4	120.1
C13	C19	C20	121.4	120.5
C16	N25	H17	120.0	120.0
C16	N25	H18	120.0	120.0
N23	C22	H15	119.1	119.4
C19	C20	C21	118.1	118.3
C19	C20	H14	121.0	120.9
C22	C21	CL1	119.6	120.4
C20	C21	CL1	120.7	120.4
C21	C20	H14	121.0	120.8
H1	C1	H2	109.4	109.4
H3	C3	H4	109.5	109.5
H7	C6	H8	109.5	109.6
H12	C18	H13	109.5	111.0
H17	N25	H18	120.0	120.0

Torsion Angles for 2X5

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C3	O2	C1	C6	65.6	61.0
C3	O2	C1	H1	185.5	181.0
C3	O2	C1	H2	305.7	301.0
O2	C3	C4	O7	175.2	176.0
O2	C3	C4	C5	54.5	57.7
C4	C3	O2	H3	240.2	240.0
C4	C3	O2	H4	119.8	120.0
O2	C3	C4	H5	295.1	296.6
H3	C3	O2	H4	239.6	240.0
O2	C1	C6	C5	305.2	302.3
C6	C1	O2	H1	240.1	240.1
C6	C1	O2	H2	119.9	120.1
O2	C1	C6	H7	65.3	62.2
O2	C1	C6	H8	185.2	182.4
H1	C1	O2	H2	239.8	240.0
O2	C3	C4	H3	119.8	120.0
O2	C3	C4	H4	240.2	240.0
C5	C4	C3	O7	239.3	241.7
C3	C4	O7	C8	192.2	191.2
O7	C4	C3	H5	240.1	239.4
C3	C4	C5	C10	176.8	183.3
C5	C4	C3	H5	119.4	121.1
C3	C4	C5	H6	63.4	63.7
H3	C3	C4	H4	120.4	120.0
C3	C4	O7	C5	239.4	241.2
O7	C4	C3	H3	55.4	56.1
O7	C4	C3	H4	295.0	296.0
C3	C4	O7	H5	118.8	120.6
O7	C4	C5	C10	58.0	64.1
C5	C4	O7	H5	239.4	239.4
O7	C4	C5	H6	304.5	304.5
C4	O7	C8	C11	198.8	198.1
C4	O7	C8	C9	20.1	18.3
C3	C4	C5	O7	118.8	119.2
C5	C4	C3	H3	294.7	297.8
C5	C4	C3	H4	174.3	177.7
C3	C4	C5	H5	240.5	239.4
C5	C4	O7	C8	312.8	310.0
O7	C4	C5	H5	121.7	120.1
C1	C6	C5	C4	49.6	57.2
C6	C5	C4	C10	133.3	119.5
C6	C5	C4	H6	246.8	239.1
C4	C5	C10	C9	319.8	312.7
C4	C5	C10	N15	196.8	188.8
C10	C5	C4	H6	113.5	119.6
C18	O17	C16	N25	183.7	163.1
C18	C10	C5	H6	196.8	195.0
O2	C1	C6	H1	119.9	120.0
O2	C1	C6	H2	240.1	239.9
C1	C6	C5	C10	180.7	175.5
C1	C6	C5	H6	296.5	296.7
H1	C1	C6	H2	120.2	120.0
H7	C6	C1	H8	240.1	239.8
C8	O7	C4	H5	73.4	70.6
C9	C8	O7	C11	181.2	180.2
O7	C8	C11	C12	180.3	180.3
O7	C8	C11	H9	0.3	0.3
O7	C8	C9	C14	179.8	179.7
C6	C5	C4	O7	191.3	183.5
C4	C5	C6	C10	228.9	241.7
C6	C5	C4	H5	69.6	63.4
C4	C5	C6	H6	113.1	120.5
C5	C6	C1	H1	185.3	182.4
C5	C6	C1	H2	65.2	62.4
C1	C6	C5	H7	120.1	119.9
C1	C6	C5	H8	239.9	240.1
C6	C5	C10	C9	188.9	193.9
C6	C5	C10	N15	65.9	70.0
C10	C5	C6	H6	244.2	238.7
O7	C8	C11	C9	181.2	180.2
C11	C8	C9	C14	1.1	359.9
C8	C11	C12	C13	1.2	0.1
C12	C11	C8	H9	180.0	179.9
C8	C11	C12	H10	181.2	180.0
O7	C8	C9	C11	178.7	179.8
C9	C8	C11	C12	359.0	0.1
C9	C8	C11	H9	179.0	180.1
C5	C10	C9	C8	13.8	17.1
C10	C9	C8	C14	178.0	179.7
C8	C9	C14	C13	358.6	0.0
C8	C9	C14	H11	178.6	180.1
O17	C16	N25	H17	0.0	180.0
O17	C16	N25	H18	180.0	0.0
C10	C5	C4	O7	58.0	64.1
C10	C5	C4	H5	296.3	303.9
C4	C5	C10	H6	246.7	240.4
C6	C5	C10	H6	115.8	121.7
C5	C10	C9	C14	191.8	196.9
C8	C11	C12	H9	180.0	180.1
C11	C12	C13	C19	182.3	179.9
C13	C12	C11	H10	180.0	180.1
C10	C9	C8	C11	179.0	179.6
C8	C9	C10	C14	182.1	180.3
C5	C10	C9	N15	238.9	236.0
C9	C10	C5	H6	73.1	72.2
C10	C9	C14	C13	180.6	180.3
C10	C9	C14	H11	0.6	0.4
C5	C10	N15	C9	121.8	123.9
N15	C10	C5	H6	310.2	308.3
N15	C10	C9	C14	312.9	320.8
C14	C9	C8	C11	1.1	359.9
C9	C14	C13	C19	178.0	180.0
C13	C12	C11	H9	181.2	180.0
C11	C12	C13	H10	180.0	179.9
C9	C14	C13	C12	1.6	0.1
C14	C13	C12	C19	176.2	179.9
C12	C13	C19	C20	207.2	360.0
C9	C14	C13	H11	180.0	180.1
C12	C13	C14	C19	183.6	180.1
C14	C13	C12	H10	178.5	179.9
C14	C13	C19	C20	30.9	180.0
C24	N23	C22	H15	180.0	179.8
C24	C19	C20	H14	178.3	180.2
C19	C13	C12	H10	2.3	360.0
C13	C19	C20	C21	183.3	180.0
C13	C19	C20	H14	3.3	360.0
H17	N25	C16	H18	180.0	180.0
N23	C22	C21	CL1	180.6	180.1
C19	C20	C21	CL1	180.3	180.0
C21	C20	C19	H14	180.0	180.1
C20	C21	C22	CL1	180.1	180.0
C22	C21	C20	H14	180.2	180.1
C19	C20	C21	H14	180.0	179.9
C22	C21	C20	CL1	179.9	180.0
CL1	C21	C20	H14	0.3	0.0
O2	C1	H1	C6	240.6	240.1
O2	C1	H1	H2	120.3	120.0
H1	C1	C6	C5	185.3	182.4
C6	C1	H1	H2	239.7	240.0
H1	C1	C6	H7	305.4	302.3
H1	C1	C6	H8	65.3	62.5
O2	C1	H2	C6	119.4	120.0
O2	C1	H2	H1	239.7	240.0
H2	C1	C6	C5	65.2	62.4
C6	C1	H2	H1	120.3	120.0
H2	C1	C6	H7	185.2	182.3
H2	C1	C6	H8	305.1	302.5
O2	C3	H3	C4	241.2	240.1
O2	C3	H3	H4	120.6	120.0
H3	C3	C4	O7	55.4	56.1
H3	C3	C4	C5	294.7	297.8
C4	C3	H3	H4	239.4	239.9
H3	C3	C4	H5	175.3	176.7
O2	C3	H4	C4	118.8	120.0
O2	C3	H4	H3	239.4	240.0
H4	C3	C4	O7	295.0	296.0
H4	C3	C4	C5	174.3	177.7
C4	C3	H4	H3	120.6	120.0
H4	C3	C4	H5	54.9	56.6
C3	C4	H5	O7	242.1	239.4
C3	C4	H5	C5	120.5	120.2
H5	C4	C3	H3	175.3	176.7
H5	C4	C3	H4	54.9	56.6
C5	C4	H5	O7	121.6	119.2
H5	C4	O7	C8	73.4	70.6
H5	C4	C5	C10	296.3	303.9
H5	C4	C5	H6	182.8	184.3
H6	C5	C4	O7	304.5	304.5
C4	C5	H6	C10	118.4	118.6
H6	C5	C4	H5	182.8	184.3
C6	C5	H6	C10	236.4	238.6
H6	C5	C10	C9	73.1	72.2
H6	C5	C10	N15	310.2	308.3
C1	C6	H7	C5	239.7	240.3
H7	C6	C1	H1	305.4	302.3
H7	C6	C1	H2	185.2	182.3
C1	C6	H7	H8	119.8	120.2
H7	C6	C5	C10	60.6	55.5
H7	C6	C5	H6	176.4	176.8
C1	C6	H8	C5	120.3	119.6
H8	C6	C1	H1	65.3	62.5
H8	C6	C1	H2	305.1	302.5
C1	C6	H8	H7	240.2	239.8
H8	C6	C5	C10	300.7	295.3
H8	C6	C5	H6	56.6	56.6
C8	C11	H9	C12	180.0	179.9
H9	C11	C12	C13	181.2	180.0
H9	C11	C12	H10	1.2	359.9
C11	C12	H10	C13	180.0	180.1
H10	C12	C11	H9	1.2	359.9
H10	C12	C13	C19	2.3	360.0
C9	C14	H11	C13	180.0	179.9
H11	C14	C13	C19	358.0	359.9
C19	C20	H14	C21	180.0	180.1
H14	C20	C21	CL1	0.3	0.0
H15	C22	C21	CL1	0.6	359.9
C16	N25	H17	H18	180.0	180.0
C16	N25	H18	H17	180.0	180.0