PDB Chemical Component 2X4
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 2X4
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C6 |
1.544 |
1.531 |
C1 |
O2 |
1.427 |
1.429 |
C18 |
O17 |
1.434 |
1.444 |
C18 |
C10 |
1.551 |
1.541 |
C6 |
C5 |
1.553 |
1.531 |
C5 |
C10 |
1.548 |
1.523 |
C5 |
C4 |
1.552 |
1.537 |
O2 |
C3 |
1.423 |
1.429 |
C3 |
C4 |
1.544 |
1.530 |
O17 |
C16 |
1.358 |
1.349 |
O7 |
C4 |
1.419 |
1.429 |
O7 |
C8 |
1.369 |
1.359 |
C10 |
C9 |
1.541 |
1.516 |
C10 |
N15 |
1.451 |
1.469 |
C8 |
C9 |
1.423 |
1.387 |
C8 |
C11 |
1.420 |
1.392 |
C9 |
C14 |
1.414 |
1.383 |
C11 |
C12 |
1.416 |
1.378 |
C14 |
C13 |
1.422 |
1.393 |
C24 |
N23 |
1.352 |
1.317 |
C24 |
C19 |
1.420 |
1.394 |
C12 |
C13 |
1.421 |
1.393 |
C13 |
C19 |
1.410 |
1.483 |
C16 |
N15 |
1.336 |
1.300 |
C16 |
N25 |
1.338 |
1.374 |
N23 |
C22 |
1.352 |
1.320 |
C19 |
C20 |
1.420 |
1.397 |
C22 |
C21 |
1.418 |
1.384 |
C20 |
C21 |
1.416 |
1.386 |
C21 |
CL1 |
1.715 |
1.736 |
C1 |
H1 |
1.100 |
1.090 |
C1 |
H2 |
1.100 |
1.090 |
C3 |
H3 |
1.100 |
1.089 |
C3 |
H4 |
1.100 |
1.090 |
C4 |
H5 |
1.100 |
1.090 |
C5 |
H6 |
1.100 |
1.089 |
C6 |
H7 |
1.100 |
1.091 |
C6 |
H8 |
1.100 |
1.091 |
C11 |
H9 |
1.080 |
1.079 |
C12 |
H10 |
1.080 |
1.080 |
C14 |
H11 |
1.080 |
1.080 |
C18 |
H12 |
1.099 |
1.090 |
C18 |
H13 |
1.100 |
1.090 |
C20 |
H14 |
1.080 |
1.080 |
C22 |
H15 |
1.080 |
1.080 |
C24 |
H16 |
1.081 |
1.080 |
N25 |
H17 |
1.000 |
0.970 |
N25 |
H18 |
1.000 |
0.969 |
Bond Angles for 2X4
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O2 |
C1 |
C6 |
110.1 |
109.4 |
C1 |
C6 |
C5 |
110.2 |
109.2 |
C6 |
C1 |
H1 |
109.3 |
109.5 |
C6 |
C1 |
H2 |
109.3 |
109.5 |
C1 |
C6 |
H7 |
109.3 |
109.5 |
C1 |
C6 |
H8 |
109.3 |
109.5 |
C1 |
O2 |
C3 |
116.9 |
114.2 |
O2 |
C1 |
H1 |
109.3 |
109.5 |
O2 |
C1 |
H2 |
109.3 |
109.5 |
C6 |
C5 |
C10 |
115.6 |
110.0 |
C6 |
C5 |
H6 |
105.2 |
110.4 |
C5 |
C10 |
C9 |
109.1 |
110.8 |
C5 |
C10 |
N15 |
108.9 |
111.1 |
C10 |
C5 |
H6 |
105.2 |
109.7 |
C5 |
C4 |
H5 |
108.8 |
109.7 |
O2 |
C3 |
C4 |
109.0 |
109.4 |
O2 |
C3 |
H3 |
109.6 |
109.5 |
O2 |
C3 |
H4 |
109.6 |
109.4 |
C4 |
C3 |
H3 |
109.6 |
109.5 |
C4 |
C3 |
H4 |
109.6 |
109.5 |
C3 |
C4 |
H5 |
108.9 |
109.8 |
O17 |
C16 |
N25 |
118.6 |
123.1 |
O7 |
C4 |
H5 |
110.6 |
109.7 |
O7 |
C8 |
C9 |
121.3 |
121.5 |
O7 |
C8 |
C11 |
117.6 |
118.6 |
C10 |
C9 |
C14 |
118.9 |
119.1 |
C9 |
C8 |
C11 |
121.1 |
120.0 |
C8 |
C9 |
C14 |
118.8 |
119.9 |
C8 |
C11 |
C12 |
119.9 |
120.3 |
C8 |
C11 |
H9 |
120.1 |
119.9 |
C9 |
C14 |
C13 |
120.5 |
120.2 |
C9 |
C14 |
H11 |
119.7 |
119.9 |
C11 |
C12 |
C13 |
119.3 |
119.9 |
C12 |
C11 |
H9 |
120.0 |
119.8 |
C11 |
C12 |
H10 |
120.3 |
120.0 |
C14 |
C13 |
C19 |
118.2 |
120.1 |
C12 |
C13 |
C19 |
121.3 |
120.2 |
C13 |
C12 |
H10 |
120.4 |
120.1 |
C13 |
C19 |
C20 |
119.3 |
120.5 |
C16 |
N25 |
H17 |
120.0 |
120.0 |
C16 |
N25 |
H18 |
120.0 |
120.0 |
N23 |
C22 |
H15 |
118.9 |
119.4 |
C19 |
C20 |
C21 |
118.4 |
118.3 |
C19 |
C20 |
H14 |
120.8 |
120.9 |
C22 |
C21 |
CL1 |
120.8 |
120.3 |
C20 |
C21 |
CL1 |
120.3 |
120.4 |
C21 |
C20 |
H14 |
120.8 |
120.8 |
H1 |
C1 |
H2 |
109.4 |
109.5 |
H3 |
C3 |
H4 |
109.5 |
109.5 |
H7 |
C6 |
H8 |
109.5 |
109.6 |
H12 |
C18 |
H13 |
109.5 |
111.0 |
H17 |
N25 |
H18 |
120.0 |
120.0 |
Torsion Angles for 2X4
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
C1 |
O2 |
C3 |
297.3 |
299.1 |
O2 |
C1 |
C6 |
H1 |
239.9 |
120.0 |
O2 |
C1 |
C6 |
H2 |
120.1 |
240.0 |
C1 |
C6 |
C5 |
C10 |
182.9 |
184.4 |
C1 |
C6 |
C5 |
H6 |
67.4 |
63.2 |
H1 |
C1 |
C6 |
H2 |
240.2 |
120.0 |
H7 |
C6 |
C1 |
H8 |
240.2 |
239.9 |
O2 |
C1 |
C6 |
C5 |
52.2 |
57.6 |
C6 |
C1 |
O2 |
H1 |
120.1 |
240.0 |
C6 |
C1 |
O2 |
H2 |
239.9 |
120.0 |
O2 |
C1 |
C6 |
H7 |
172.3 |
177.6 |
O2 |
C1 |
C6 |
H8 |
292.1 |
297.7 |
C1 |
O2 |
C3 |
C4 |
60.8 |
61.1 |
C1 |
O2 |
C3 |
H3 |
180.7 |
181.2 |
C1 |
O2 |
C3 |
H4 |
300.9 |
301.2 |
H1 |
C1 |
O2 |
H2 |
119.7 |
240.0 |
C18 |
O17 |
C16 |
N25 |
185.6 |
196.9 |
C18 |
C10 |
C5 |
H6 |
49.0 |
50.1 |
C5 |
C6 |
C1 |
H1 |
172.3 |
297.7 |
C5 |
C6 |
C1 |
H2 |
292.1 |
177.7 |
C1 |
C6 |
C5 |
H7 |
120.1 |
119.9 |
C1 |
C6 |
C5 |
H8 |
239.9 |
240.1 |
C6 |
C5 |
C10 |
C9 |
168.8 |
165.5 |
C6 |
C5 |
C10 |
N15 |
46.9 |
41.8 |
C10 |
C5 |
C6 |
H6 |
115.5 |
121.2 |
C6 |
C5 |
C4 |
H5 |
286.0 |
297.1 |
C6 |
C5 |
C10 |
H6 |
244.5 |
238.4 |
C10 |
C5 |
C4 |
H5 |
58.2 |
56.6 |
C5 |
C10 |
C9 |
C14 |
171.4 |
163.5 |
C1 |
C6 |
C5 |
C4 |
313.3 |
302.7 |
C5 |
C4 |
C3 |
H3 |
189.8 |
182.1 |
C5 |
C4 |
C3 |
H4 |
69.7 |
62.1 |
C3 |
C4 |
C5 |
H5 |
120.6 |
120.2 |
O7 |
C4 |
C5 |
H5 |
239.3 |
239.8 |
C3 |
O2 |
C1 |
C6 |
297.3 |
299.1 |
C3 |
O2 |
C1 |
H1 |
177.2 |
59.0 |
C3 |
O2 |
C1 |
H2 |
57.4 |
179.0 |
C4 |
C3 |
O2 |
H3 |
240.1 |
239.9 |
C4 |
C3 |
O2 |
H4 |
119.9 |
120.0 |
O2 |
C3 |
C4 |
H5 |
70.3 |
62.4 |
H3 |
C3 |
O2 |
H4 |
239.8 |
240.0 |
C5 |
C4 |
C3 |
H5 |
239.5 |
239.8 |
O2 |
C3 |
C4 |
H3 |
119.9 |
120.0 |
O2 |
C3 |
C4 |
H4 |
240.1 |
240.1 |
O7 |
C4 |
C3 |
H5 |
119.8 |
120.6 |
H3 |
C3 |
C4 |
H4 |
120.1 |
120.1 |
O17 |
C16 |
N25 |
H17 |
360.0 |
179.9 |
O17 |
C16 |
N25 |
H18 |
180.0 |
360.0 |
C5 |
C4 |
O7 |
H5 |
119.5 |
120.2 |
O7 |
C4 |
C3 |
H3 |
70.1 |
62.9 |
O7 |
C4 |
C3 |
H4 |
310.0 |
302.9 |
C3 |
C4 |
O7 |
H5 |
241.3 |
239.4 |
C8 |
O7 |
C4 |
H5 |
294.6 |
289.6 |
C9 |
C8 |
O7 |
C11 |
180.7 |
179.9 |
O7 |
C8 |
C9 |
C14 |
179.4 |
180.3 |
O7 |
C8 |
C11 |
C12 |
180.6 |
179.8 |
O7 |
C8 |
C11 |
H9 |
0.6 |
359.8 |
C5 |
C10 |
C9 |
N15 |
239.6 |
236.2 |
C9 |
C10 |
C5 |
H6 |
284.3 |
287.1 |
C10 |
C9 |
C8 |
C11 |
178.9 |
181.1 |
C8 |
C9 |
C10 |
C14 |
181.1 |
179.1 |
C10 |
C9 |
C14 |
C13 |
181.2 |
179.0 |
C10 |
C9 |
C14 |
H11 |
1.2 |
358.9 |
C5 |
C10 |
N15 |
C9 |
120.5 |
123.6 |
N15 |
C10 |
C5 |
H6 |
162.3 |
163.4 |
N15 |
C10 |
C9 |
C14 |
291.8 |
287.3 |
C5 |
C10 |
C9 |
C8 |
352.5 |
342.6 |
O7 |
C8 |
C9 |
C11 |
179.3 |
180.1 |
C10 |
C9 |
C8 |
C14 |
178.9 |
180.9 |
C9 |
C8 |
C11 |
C12 |
359.9 |
359.9 |
C9 |
C8 |
C11 |
H9 |
179.9 |
179.9 |
C8 |
C9 |
C14 |
C13 |
0.2 |
359.9 |
C8 |
C9 |
C14 |
H11 |
180.1 |
179.9 |
O7 |
C8 |
C11 |
C9 |
180.7 |
179.9 |
C11 |
C8 |
C9 |
C14 |
0.1 |
0.2 |
C8 |
C11 |
C12 |
C13 |
359.9 |
360.0 |
C12 |
C11 |
C8 |
H9 |
180.0 |
180.0 |
C8 |
C11 |
C12 |
H10 |
179.8 |
180.0 |
C14 |
C9 |
C8 |
C11 |
0.1 |
0.2 |
C9 |
C14 |
C13 |
C19 |
180.3 |
180.0 |
C8 |
C11 |
C12 |
H9 |
180.0 |
180.0 |
C11 |
C12 |
C13 |
C19 |
179.7 |
180.1 |
C13 |
C12 |
C11 |
H10 |
180.0 |
180.0 |
C9 |
C14 |
C13 |
H11 |
180.0 |
180.0 |
C12 |
C13 |
C14 |
C19 |
179.3 |
180.0 |
C14 |
C13 |
C12 |
H10 |
180.4 |
180.0 |
C14 |
C13 |
C19 |
C20 |
43.1 |
180.0 |
C24 |
N23 |
C22 |
H15 |
179.7 |
179.8 |
C24 |
C19 |
C20 |
H14 |
180.5 |
180.2 |
C9 |
C14 |
C13 |
C12 |
359.6 |
0.0 |
C13 |
C12 |
C11 |
H9 |
179.8 |
180.0 |
C11 |
C12 |
C13 |
H10 |
180.0 |
180.0 |
C14 |
C13 |
C12 |
C19 |
180.7 |
180.0 |
C12 |
C13 |
C19 |
C20 |
223.8 |
359.9 |
C19 |
C13 |
C12 |
H10 |
359.7 |
0.1 |
C13 |
C19 |
C20 |
C21 |
181.0 |
180.0 |
C13 |
C19 |
C20 |
H14 |
1.0 |
0.1 |
H17 |
N25 |
C16 |
H18 |
180.0 |
179.9 |
N23 |
C22 |
C21 |
CL1 |
180.4 |
180.0 |
C19 |
C20 |
C21 |
CL1 |
179.5 |
180.0 |
C21 |
C20 |
C19 |
H14 |
180.0 |
179.9 |
C20 |
C21 |
C22 |
CL1 |
180.5 |
180.0 |
C22 |
C21 |
C20 |
H14 |
179.1 |
180.0 |
C19 |
C20 |
C21 |
H14 |
180.0 |
180.1 |
C22 |
C21 |
C20 |
CL1 |
179.5 |
180.0 |
CL1 |
C21 |
C20 |
H14 |
359.5 |
360.0 |
O2 |
C1 |
H1 |
C6 |
120.6 |
240.0 |
H1 |
C1 |
C6 |
C5 |
172.3 |
297.7 |
C6 |
C1 |
H1 |
H2 |
119.7 |
240.0 |
H1 |
C1 |
C6 |
H7 |
292.4 |
57.6 |
H1 |
C1 |
C6 |
H8 |
52.2 |
177.7 |
H1 |
C1 |
O2 |
C3 |
177.2 |
59.0 |
O2 |
C1 |
H1 |
H2 |
240.3 |
120.0 |
O2 |
C1 |
H2 |
C6 |
239.4 |
120.0 |
H2 |
C1 |
C6 |
C5 |
292.1 |
177.7 |
C6 |
C1 |
H2 |
H1 |
240.3 |
120.0 |
H2 |
C1 |
C6 |
H7 |
52.2 |
297.6 |
H2 |
C1 |
C6 |
H8 |
171.9 |
57.7 |
H2 |
C1 |
O2 |
C3 |
57.4 |
179.0 |
O2 |
C1 |
H2 |
H1 |
119.7 |
240.0 |
O2 |
C3 |
H3 |
C4 |
240.4 |
240.0 |
O2 |
C3 |
H3 |
H4 |
120.2 |
119.9 |
C4 |
C3 |
H3 |
H4 |
239.8 |
239.9 |
H3 |
C3 |
C4 |
H5 |
310.3 |
302.3 |
O2 |
C3 |
H4 |
C4 |
119.6 |
119.9 |
O2 |
C3 |
H4 |
H3 |
239.8 |
240.0 |
C4 |
C3 |
H4 |
H3 |
120.2 |
120.1 |
H4 |
C3 |
C4 |
H5 |
190.2 |
182.3 |
H5 |
C4 |
C3 |
H3 |
310.3 |
302.3 |
H5 |
C4 |
C3 |
H4 |
190.2 |
182.3 |
C6 |
C5 |
H6 |
C10 |
122.5 |
121.4 |
H6 |
C5 |
C10 |
C9 |
284.3 |
287.1 |
H6 |
C5 |
C10 |
N15 |
162.3 |
163.4 |
H6 |
C5 |
C4 |
H5 |
171.8 |
176.3 |
C1 |
C6 |
H7 |
C5 |
239.4 |
240.3 |
H7 |
C6 |
C1 |
H1 |
292.4 |
57.6 |
H7 |
C6 |
C1 |
H2 |
52.2 |
297.6 |
C1 |
C6 |
H7 |
H8 |
119.7 |
120.1 |
H7 |
C6 |
C5 |
C10 |
62.8 |
64.5 |
H7 |
C6 |
C5 |
H6 |
307.3 |
303.3 |
C1 |
C6 |
H8 |
C5 |
120.7 |
119.7 |
H8 |
C6 |
C1 |
H1 |
52.2 |
177.7 |
H8 |
C6 |
C1 |
H2 |
171.9 |
57.7 |
C1 |
C6 |
H8 |
H7 |
240.3 |
239.9 |
H8 |
C6 |
C5 |
C10 |
303.0 |
304.4 |
H8 |
C6 |
C5 |
H6 |
187.5 |
183.2 |
C8 |
C11 |
H9 |
C12 |
180.0 |
180.0 |
H9 |
C11 |
C12 |
C13 |
179.8 |
180.0 |
H9 |
C11 |
C12 |
H10 |
359.8 |
0.1 |
C11 |
C12 |
H10 |
C13 |
180.0 |
180.0 |
H10 |
C12 |
C11 |
H9 |
359.8 |
0.1 |
H10 |
C12 |
C13 |
C19 |
359.7 |
0.1 |
C9 |
C14 |
H11 |
C13 |
180.0 |
180.0 |
H11 |
C14 |
C13 |
C19 |
0.3 |
360.0 |
C19 |
C20 |
H14 |
C21 |
180.0 |
179.9 |
H14 |
C20 |
C21 |
CL1 |
359.5 |
360.0 |
H15 |
C22 |
C21 |
CL1 |
0.4 |
360.0 |
C16 |
N25 |
H17 |
H18 |
180.0 |
180.1 |
C16 |
N25 |
H18 |
H17 |
180.0 |
179.9 |