PDB Chemical Component 2X4

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 2X4

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C6 1.544 1.531
C1 O2 1.427 1.429
C18 O17 1.434 1.444
C18 C10 1.551 1.541
C6 C5 1.553 1.531
C5 C10 1.548 1.523
C5 C4 1.552 1.537
O2 C3 1.423 1.429
C3 C4 1.544 1.530
O17 C16 1.358 1.349
O7 C4 1.419 1.429
O7 C8 1.369 1.359
C10 C9 1.541 1.516
C10 N15 1.451 1.469
C8 C9 1.423 1.387
C8 C11 1.420 1.392
C9 C14 1.414 1.383
C11 C12 1.416 1.378
C14 C13 1.422 1.393
C24 N23 1.352 1.317
C24 C19 1.420 1.394
C12 C13 1.421 1.393
C13 C19 1.410 1.483
C16 N15 1.336 1.300
C16 N25 1.338 1.374
N23 C22 1.352 1.320
C19 C20 1.420 1.397
C22 C21 1.418 1.384
C20 C21 1.416 1.386
C21 CL1 1.715 1.736
C1 H1 1.100 1.090
C1 H2 1.100 1.090
C3 H3 1.100 1.089
C3 H4 1.100 1.090
C4 H5 1.100 1.090
C5 H6 1.100 1.089
C6 H7 1.100 1.091
C6 H8 1.100 1.091
C11 H9 1.080 1.079
C12 H10 1.080 1.080
C14 H11 1.080 1.080
C18 H12 1.099 1.090
C18 H13 1.100 1.090
C20 H14 1.080 1.080
C22 H15 1.080 1.080
C24 H16 1.081 1.080
N25 H17 1.000 0.970
N25 H18 1.000 0.969

Bond Angles for 2X4

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O2 C1 C6 110.1 109.4
C1 C6 C5 110.2 109.2
C6 C1 H1 109.3 109.5
C6 C1 H2 109.3 109.5
C1 C6 H7 109.3 109.5
C1 C6 H8 109.3 109.5
C1 O2 C3 116.9 114.2
O2 C1 H1 109.3 109.5
O2 C1 H2 109.3 109.5
C6 C5 C10 115.6 110.0
C6 C5 H6 105.2 110.4
C5 C10 C9 109.1 110.8
C5 C10 N15 108.9 111.1
C10 C5 H6 105.2 109.7
C5 C4 H5 108.8 109.7
O2 C3 C4 109.0 109.4
O2 C3 H3 109.6 109.5
O2 C3 H4 109.6 109.4
C4 C3 H3 109.6 109.5
C4 C3 H4 109.6 109.5
C3 C4 H5 108.9 109.8
O17 C16 N25 118.6 123.1
O7 C4 H5 110.6 109.7
O7 C8 C9 121.3 121.5
O7 C8 C11 117.6 118.6
C10 C9 C14 118.9 119.1
C9 C8 C11 121.1 120.0
C8 C9 C14 118.8 119.9
C8 C11 C12 119.9 120.3
C8 C11 H9 120.1 119.9
C9 C14 C13 120.5 120.2
C9 C14 H11 119.7 119.9
C11 C12 C13 119.3 119.9
C12 C11 H9 120.0 119.8
C11 C12 H10 120.3 120.0
C14 C13 C19 118.2 120.1
C12 C13 C19 121.3 120.2
C13 C12 H10 120.4 120.1
C13 C19 C20 119.3 120.5
C16 N25 H17 120.0 120.0
C16 N25 H18 120.0 120.0
N23 C22 H15 118.9 119.4
C19 C20 C21 118.4 118.3
C19 C20 H14 120.8 120.9
C22 C21 CL1 120.8 120.3
C20 C21 CL1 120.3 120.4
C21 C20 H14 120.8 120.8
H1 C1 H2 109.4 109.5
H3 C3 H4 109.5 109.5
H7 C6 H8 109.5 109.6
H12 C18 H13 109.5 111.0
H17 N25 H18 120.0 120.0

Torsion Angles for 2X4

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6 C1 O2 C3 297.3 299.1
O2 C1 C6 H1 239.9 120.0
O2 C1 C6 H2 120.1 240.0
C1 C6 C5 C10 182.9 184.4
C1 C6 C5 H6 67.4 63.2
H1 C1 C6 H2 240.2 120.0
H7 C6 C1 H8 240.2 239.9
O2 C1 C6 C5 52.2 57.6
C6 C1 O2 H1 120.1 240.0
C6 C1 O2 H2 239.9 120.0
O2 C1 C6 H7 172.3 177.6
O2 C1 C6 H8 292.1 297.7
C1 O2 C3 C4 60.8 61.1
C1 O2 C3 H3 180.7 181.2
C1 O2 C3 H4 300.9 301.2
H1 C1 O2 H2 119.7 240.0
C18 O17 C16 N25 185.6 196.9
C18 C10 C5 H6 49.0 50.1
C5 C6 C1 H1 172.3 297.7
C5 C6 C1 H2 292.1 177.7
C1 C6 C5 H7 120.1 119.9
C1 C6 C5 H8 239.9 240.1
C6 C5 C10 C9 168.8 165.5
C6 C5 C10 N15 46.9 41.8
C10 C5 C6 H6 115.5 121.2
C6 C5 C4 H5 286.0 297.1
C6 C5 C10 H6 244.5 238.4
C10 C5 C4 H5 58.2 56.6
C5 C10 C9 C14 171.4 163.5
C1 C6 C5 C4 313.3 302.7
C5 C4 C3 H3 189.8 182.1
C5 C4 C3 H4 69.7 62.1
C3 C4 C5 H5 120.6 120.2
O7 C4 C5 H5 239.3 239.8
C3 O2 C1 C6 297.3 299.1
C3 O2 C1 H1 177.2 59.0
C3 O2 C1 H2 57.4 179.0
C4 C3 O2 H3 240.1 239.9
C4 C3 O2 H4 119.9 120.0
O2 C3 C4 H5 70.3 62.4
H3 C3 O2 H4 239.8 240.0
C5 C4 C3 H5 239.5 239.8
O2 C3 C4 H3 119.9 120.0
O2 C3 C4 H4 240.1 240.1
O7 C4 C3 H5 119.8 120.6
H3 C3 C4 H4 120.1 120.1
O17 C16 N25 H17 360.0 179.9
O17 C16 N25 H18 180.0 360.0
C5 C4 O7 H5 119.5 120.2
O7 C4 C3 H3 70.1 62.9
O7 C4 C3 H4 310.0 302.9
C3 C4 O7 H5 241.3 239.4
C8 O7 C4 H5 294.6 289.6
C9 C8 O7 C11 180.7 179.9
O7 C8 C9 C14 179.4 180.3
O7 C8 C11 C12 180.6 179.8
O7 C8 C11 H9 0.6 359.8
C5 C10 C9 N15 239.6 236.2
C9 C10 C5 H6 284.3 287.1
C10 C9 C8 C11 178.9 181.1
C8 C9 C10 C14 181.1 179.1
C10 C9 C14 C13 181.2 179.0
C10 C9 C14 H11 1.2 358.9
C5 C10 N15 C9 120.5 123.6
N15 C10 C5 H6 162.3 163.4
N15 C10 C9 C14 291.8 287.3
C5 C10 C9 C8 352.5 342.6
O7 C8 C9 C11 179.3 180.1
C10 C9 C8 C14 178.9 180.9
C9 C8 C11 C12 359.9 359.9
C9 C8 C11 H9 179.9 179.9
C8 C9 C14 C13 0.2 359.9
C8 C9 C14 H11 180.1 179.9
O7 C8 C11 C9 180.7 179.9
C11 C8 C9 C14 0.1 0.2
C8 C11 C12 C13 359.9 360.0
C12 C11 C8 H9 180.0 180.0
C8 C11 C12 H10 179.8 180.0
C14 C9 C8 C11 0.1 0.2
C9 C14 C13 C19 180.3 180.0
C8 C11 C12 H9 180.0 180.0
C11 C12 C13 C19 179.7 180.1
C13 C12 C11 H10 180.0 180.0
C9 C14 C13 H11 180.0 180.0
C12 C13 C14 C19 179.3 180.0
C14 C13 C12 H10 180.4 180.0
C14 C13 C19 C20 43.1 180.0
C24 N23 C22 H15 179.7 179.8
C24 C19 C20 H14 180.5 180.2
C9 C14 C13 C12 359.6 0.0
C13 C12 C11 H9 179.8 180.0
C11 C12 C13 H10 180.0 180.0
C14 C13 C12 C19 180.7 180.0
C12 C13 C19 C20 223.8 359.9
C19 C13 C12 H10 359.7 0.1
C13 C19 C20 C21 181.0 180.0
C13 C19 C20 H14 1.0 0.1
H17 N25 C16 H18 180.0 179.9
N23 C22 C21 CL1 180.4 180.0
C19 C20 C21 CL1 179.5 180.0
C21 C20 C19 H14 180.0 179.9
C20 C21 C22 CL1 180.5 180.0
C22 C21 C20 H14 179.1 180.0
C19 C20 C21 H14 180.0 180.1
C22 C21 C20 CL1 179.5 180.0
CL1 C21 C20 H14 359.5 360.0
O2 C1 H1 C6 120.6 240.0
H1 C1 C6 C5 172.3 297.7
C6 C1 H1 H2 119.7 240.0
H1 C1 C6 H7 292.4 57.6
H1 C1 C6 H8 52.2 177.7
H1 C1 O2 C3 177.2 59.0
O2 C1 H1 H2 240.3 120.0
O2 C1 H2 C6 239.4 120.0
H2 C1 C6 C5 292.1 177.7
C6 C1 H2 H1 240.3 120.0
H2 C1 C6 H7 52.2 297.6
H2 C1 C6 H8 171.9 57.7
H2 C1 O2 C3 57.4 179.0
O2 C1 H2 H1 119.7 240.0
O2 C3 H3 C4 240.4 240.0
O2 C3 H3 H4 120.2 119.9
C4 C3 H3 H4 239.8 239.9
H3 C3 C4 H5 310.3 302.3
O2 C3 H4 C4 119.6 119.9
O2 C3 H4 H3 239.8 240.0
C4 C3 H4 H3 120.2 120.1
H4 C3 C4 H5 190.2 182.3
H5 C4 C3 H3 310.3 302.3
H5 C4 C3 H4 190.2 182.3
C6 C5 H6 C10 122.5 121.4
H6 C5 C10 C9 284.3 287.1
H6 C5 C10 N15 162.3 163.4
H6 C5 C4 H5 171.8 176.3
C1 C6 H7 C5 239.4 240.3
H7 C6 C1 H1 292.4 57.6
H7 C6 C1 H2 52.2 297.6
C1 C6 H7 H8 119.7 120.1
H7 C6 C5 C10 62.8 64.5
H7 C6 C5 H6 307.3 303.3
C1 C6 H8 C5 120.7 119.7
H8 C6 C1 H1 52.2 177.7
H8 C6 C1 H2 171.9 57.7
C1 C6 H8 H7 240.3 239.9
H8 C6 C5 C10 303.0 304.4
H8 C6 C5 H6 187.5 183.2
C8 C11 H9 C12 180.0 180.0
H9 C11 C12 C13 179.8 180.0
H9 C11 C12 H10 359.8 0.1
C11 C12 H10 C13 180.0 180.0
H10 C12 C11 H9 359.8 0.1
H10 C12 C13 C19 359.7 0.1
C9 C14 H11 C13 180.0 180.0
H11 C14 C13 C19 0.3 360.0
C19 C20 H14 C21 180.0 179.9
H14 C20 C21 CL1 359.5 360.0
H15 C22 C21 CL1 0.4 360.0
C16 N25 H17 H18 180.0 180.1
C16 N25 H18 H17 180.0 179.9