PDB Chemical Component 2VU
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 2VU
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N8 |
C7 |
1.136 |
1.136 |
| C7 |
C5 |
1.434 |
1.432 |
| N25 |
N27 |
1.290 |
1.284 |
| N25 |
C24 |
1.376 |
1.371 |
| N27 |
C18 |
1.318 |
1.316 |
| C5 |
C4 |
1.405 |
1.396 |
| C5 |
C6 |
1.410 |
1.396 |
| C4 |
C3 |
1.390 |
1.379 |
| C24 |
C23 |
1.403 |
1.389 |
| C24 |
C19 |
1.419 |
1.410 |
| C23 |
C22 |
1.406 |
1.388 |
| C6 |
C1 |
1.388 |
1.379 |
| C18 |
C19 |
1.469 |
1.469 |
| C18 |
C16 |
1.474 |
1.474 |
| N15 |
C16 |
1.357 |
1.349 |
| N15 |
C12 |
1.419 |
1.407 |
| C29 |
N30 |
1.350 |
1.349 |
| C29 |
C28 |
1.369 |
1.365 |
| C11 |
C12 |
1.356 |
1.358 |
| C11 |
N10 |
1.356 |
1.358 |
| C19 |
C20 |
1.402 |
1.393 |
| C3 |
C9 |
1.512 |
1.507 |
| C3 |
C2 |
1.393 |
1.384 |
| C16 |
O17 |
1.221 |
1.216 |
| C22 |
C28 |
1.496 |
1.485 |
| C22 |
C21 |
1.413 |
1.399 |
| N30 |
N32 |
1.398 |
1.400 |
| C12 |
C13 |
1.408 |
1.402 |
| C9 |
N10 |
1.461 |
1.465 |
| C28 |
C33 |
1.414 |
1.408 |
| C1 |
C2 |
1.394 |
1.383 |
| N10 |
N14 |
1.401 |
1.401 |
| C20 |
C21 |
1.367 |
1.365 |
| N32 |
C33 |
1.306 |
1.306 |
| C13 |
N14 |
1.306 |
1.308 |
| C1 |
H1 |
1.080 |
1.081 |
| C2 |
H2 |
1.080 |
1.080 |
| C4 |
H3 |
1.080 |
1.080 |
| C6 |
H4 |
1.080 |
1.081 |
| C9 |
H5 |
1.100 |
1.089 |
| C9 |
H6 |
1.100 |
1.090 |
| C11 |
H7 |
1.080 |
1.080 |
| C13 |
H8 |
1.080 |
1.080 |
| N15 |
H9 |
1.000 |
0.969 |
| C20 |
H10 |
1.080 |
1.080 |
| C21 |
H11 |
1.080 |
1.080 |
| C23 |
H12 |
1.080 |
1.080 |
| N25 |
H13 |
1.000 |
0.970 |
| C29 |
H14 |
1.080 |
1.080 |
| N30 |
H15 |
1.000 |
0.969 |
| C33 |
H16 |
1.080 |
1.080 |
Bond Angles for 2VU
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N27 |
N25 |
H13 |
124.2 |
124.4 |
| C5 |
C4 |
H3 |
120.1 |
120.1 |
| C5 |
C6 |
H4 |
120.2 |
120.1 |
| C4 |
C3 |
C9 |
119.4 |
119.9 |
| C24 |
C23 |
H12 |
120.3 |
120.2 |
| C23 |
C22 |
C28 |
121.6 |
119.7 |
| C6 |
C1 |
H1 |
119.9 |
119.9 |
| C18 |
C19 |
C20 |
134.5 |
135.3 |
| N15 |
C16 |
O17 |
121.3 |
120.0 |
| C16 |
N15 |
H9 |
117.7 |
120.0 |
| C29 |
N30 |
N32 |
108.3 |
108.2 |
| N30 |
C29 |
H14 |
126.0 |
126.2 |
| C29 |
N30 |
H15 |
125.8 |
125.9 |
| C29 |
C28 |
C33 |
106.6 |
107.5 |
| C11 |
C12 |
C13 |
106.9 |
107.8 |
| C12 |
C11 |
H7 |
126.0 |
126.2 |
| C11 |
N10 |
N14 |
108.3 |
107.9 |
| C19 |
C20 |
C21 |
119.8 |
119.8 |
| C19 |
C20 |
H10 |
120.1 |
120.1 |
| C3 |
C9 |
N10 |
107.3 |
109.4 |
| C3 |
C9 |
H5 |
110.0 |
109.5 |
| C3 |
C9 |
H6 |
110.0 |
109.5 |
| C3 |
C2 |
H2 |
119.8 |
119.9 |
| C22 |
C28 |
C33 |
126.1 |
126.3 |
| C22 |
C21 |
H11 |
119.7 |
119.7 |
| N30 |
N32 |
C33 |
108.2 |
108.5 |
| N32 |
N30 |
H15 |
125.8 |
125.9 |
| C12 |
C13 |
N14 |
109.2 |
108.3 |
| C12 |
C13 |
H8 |
125.4 |
125.9 |
| C9 |
N10 |
N14 |
125.6 |
126.1 |
| N10 |
C9 |
H5 |
110.0 |
109.5 |
| N10 |
C9 |
H6 |
110.0 |
109.4 |
| C28 |
C33 |
N32 |
108.8 |
108.1 |
| C28 |
C33 |
H16 |
125.6 |
125.9 |
| C2 |
C1 |
H1 |
119.9 |
119.9 |
| C1 |
C2 |
H2 |
119.8 |
119.9 |
| N10 |
N14 |
C13 |
107.6 |
108.4 |
| C21 |
C20 |
H10 |
120.1 |
120.1 |
| C20 |
C21 |
H11 |
119.7 |
119.8 |
| N32 |
C33 |
H16 |
125.6 |
126.0 |
| N14 |
C13 |
H8 |
125.4 |
125.8 |
| H5 |
C9 |
H6 |
109.5 |
109.5 |
Torsion Angles for 2VU
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C7 |
C5 |
C4 |
H3 |
0.4 |
360.0 |
| C7 |
C5 |
C6 |
H4 |
359.8 |
359.7 |
| N25 |
C24 |
C23 |
H12 |
359.6 |
359.9 |
| C5 |
C4 |
C3 |
C9 |
180.2 |
180.0 |
| C6 |
C5 |
C4 |
H3 |
180.1 |
179.7 |
| C5 |
C6 |
C1 |
H1 |
179.9 |
179.7 |
| C4 |
C3 |
C9 |
N10 |
98.9 |
269.9 |
| C4 |
C3 |
C9 |
H5 |
218.6 |
29.9 |
| C4 |
C3 |
C9 |
H6 |
339.2 |
150.0 |
| C4 |
C3 |
C2 |
H2 |
180.6 |
180.0 |
| C24 |
C23 |
C22 |
C28 |
176.8 |
180.0 |
| C24 |
C19 |
C20 |
H10 |
180.5 |
179.9 |
| C23 |
C22 |
C28 |
C33 |
170.3 |
359.8 |
| C23 |
C22 |
C21 |
H11 |
178.5 |
180.1 |
| C2 |
C1 |
C6 |
H1 |
180.0 |
179.7 |
| C6 |
C1 |
C2 |
H2 |
179.7 |
180.3 |
| C18 |
C19 |
C20 |
C21 |
179.6 |
180.0 |
| C18 |
C19 |
C20 |
H10 |
359.6 |
360.0 |
| C18 |
C16 |
N15 |
H9 |
1.9 |
359.9 |
| N15 |
C12 |
C11 |
H7 |
0.7 |
360.0 |
| N15 |
C12 |
C13 |
H8 |
358.6 |
0.1 |
| N30 |
C29 |
C28 |
C33 |
358.3 |
0.3 |
| C29 |
N30 |
N32 |
C33 |
359.8 |
359.7 |
| N32 |
N30 |
C29 |
H15 |
180.0 |
180.0 |
| C22 |
C28 |
C29 |
C33 |
184.8 |
179.7 |
| C29 |
C28 |
C33 |
N32 |
1.6 |
359.5 |
| C29 |
C28 |
C33 |
H16 |
181.6 |
179.8 |
| C12 |
C11 |
N10 |
N14 |
1.9 |
0.2 |
| C11 |
C12 |
C13 |
N14 |
1.5 |
359.7 |
| C11 |
C12 |
C13 |
H8 |
181.5 |
180.0 |
| C9 |
N10 |
C11 |
N14 |
176.4 |
179.7 |
| C11 |
N10 |
C9 |
H5 |
154.0 |
5.3 |
| C11 |
N10 |
C9 |
H6 |
33.4 |
245.3 |
| C11 |
N10 |
N14 |
C13 |
359.1 |
359.5 |
| C21 |
C20 |
C19 |
H10 |
180.0 |
180.0 |
| C19 |
C20 |
C21 |
H11 |
180.4 |
180.0 |
| C9 |
C3 |
C2 |
H2 |
359.9 |
359.9 |
| C3 |
C9 |
N10 |
N14 |
89.5 |
305.0 |
| N10 |
C9 |
C3 |
H5 |
240.3 |
240.0 |
| N10 |
C9 |
C3 |
H6 |
119.6 |
119.9 |
| H5 |
C9 |
C3 |
H6 |
239.3 |
240.0 |
| C3 |
C2 |
C1 |
H1 |
179.7 |
179.9 |
| C1 |
C2 |
C3 |
H2 |
180.0 |
180.1 |
| O17 |
C16 |
N15 |
H9 |
182.4 |
180.0 |
| C29 |
C28 |
C22 |
C33 |
174.3 |
180.4 |
| C28 |
C22 |
C21 |
H11 |
3.1 |
0.0 |
| C22 |
C28 |
C33 |
N32 |
176.9 |
179.9 |
| C22 |
C28 |
C33 |
H16 |
356.9 |
0.1 |
| C22 |
C21 |
C20 |
H10 |
180.4 |
180.1 |
| C20 |
C21 |
C22 |
H11 |
180.0 |
179.9 |
| N32 |
N30 |
C29 |
H14 |
181.2 |
180.0 |
| C29 |
N30 |
N32 |
H15 |
180.0 |
180.0 |
| C28 |
C33 |
N32 |
N30 |
359.1 |
0.5 |
| N30 |
N32 |
C33 |
H16 |
179.1 |
180.2 |
| C13 |
C12 |
C11 |
H7 |
178.0 |
180.1 |
| N10 |
N14 |
C13 |
C12 |
359.7 |
0.5 |
| N14 |
C13 |
C12 |
H8 |
180.0 |
179.7 |
| C11 |
N10 |
C9 |
N14 |
184.2 |
180.3 |
| C3 |
C9 |
N10 |
H5 |
119.7 |
120.0 |
| C3 |
C9 |
N10 |
H6 |
240.3 |
240.0 |
| C9 |
N10 |
N14 |
C13 |
182.7 |
179.8 |
| H5 |
C9 |
N10 |
H6 |
120.7 |
120.0 |
| N30 |
N32 |
C33 |
C28 |
359.1 |
0.5 |
| N32 |
C33 |
C28 |
H16 |
180.0 |
179.8 |
| C6 |
C1 |
C2 |
H1 |
180.0 |
180.3 |
| C3 |
C2 |
C1 |
H2 |
180.0 |
179.9 |
| C12 |
C13 |
N14 |
N10 |
359.7 |
0.5 |
| N14 |
N10 |
C9 |
H5 |
329.8 |
185.0 |
| N14 |
N10 |
C9 |
H6 |
209.1 |
65.0 |
| N10 |
N14 |
C13 |
H8 |
179.6 |
180.2 |
| C19 |
C20 |
C21 |
H10 |
180.0 |
180.0 |
| C22 |
C21 |
C20 |
H11 |
180.0 |
180.1 |
| C33 |
N32 |
N30 |
H15 |
179.8 |
179.7 |
| C28 |
C33 |
N32 |
H16 |
180.0 |
180.2 |
| C12 |
C13 |
N14 |
H8 |
180.0 |
180.3 |
| H1 |
C1 |
C2 |
H2 |
359.7 |
0.0 |
| H2 |
C2 |
C1 |
H1 |
359.7 |
0.0 |
| H3 |
C4 |
C3 |
C9 |
0.2 |
0.1 |
| H4 |
C6 |
C1 |
H1 |
359.9 |
0.3 |
| C3 |
C9 |
H5 |
N10 |
242.0 |
240.0 |
| C3 |
C9 |
H5 |
H6 |
121.0 |
120.0 |
| H5 |
C9 |
N10 |
N14 |
329.8 |
185.0 |
| N10 |
C9 |
H5 |
H6 |
239.0 |
240.0 |
| C3 |
C9 |
H6 |
N10 |
118.0 |
119.9 |
| C3 |
C9 |
H6 |
H5 |
239.0 |
240.0 |
| H6 |
C9 |
N10 |
N14 |
209.1 |
65.0 |
| N10 |
C9 |
H6 |
H5 |
121.0 |
120.0 |
| H7 |
C11 |
C12 |
C13 |
178.0 |
180.1 |
| H7 |
C11 |
N10 |
N14 |
181.9 |
180.2 |
| C12 |
C13 |
H8 |
N14 |
180.0 |
179.6 |
| H9 |
N15 |
C16 |
O17 |
182.4 |
180.0 |
| C19 |
C20 |
H10 |
C21 |
180.0 |
180.0 |
| H10 |
C20 |
C21 |
H11 |
0.4 |
360.0 |
| H11 |
C21 |
C20 |
H10 |
0.4 |
360.0 |
| H12 |
C23 |
C22 |
C28 |
356.8 |
0.1 |
| H14 |
C29 |
N30 |
N32 |
181.2 |
180.0 |
| H14 |
C29 |
N30 |
H15 |
1.2 |
360.0 |
| H14 |
C29 |
C28 |
C33 |
178.3 |
180.2 |
| C29 |
N30 |
H15 |
N32 |
180.0 |
180.0 |
| H15 |
N30 |
C29 |
H14 |
1.2 |
360.0 |
| H15 |
N30 |
N32 |
C33 |
179.8 |
179.7 |
| C28 |
C33 |
H16 |
N32 |
180.0 |
179.7 |