Ligand Depot Graph Search Summary

PDB Chemical Component 2VO (obsoleted)

Ideal Model

Chemical Description

Name	Phytochromobilin, bound form
Formula	C33 H40 N4 O6
Formal charge	0
Molecular weight	588.694 g/mol
Component type	NON-POLYMER

Chemical features

Atom count	83
Chiral atom count	2
Chiral atoms	C20 C22
Bond count	86
Aromatic bond count	10

Chemical Identifiers

Systematic name (OpenEye OEToolkits)

3-[5-[(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-2-[[5-[(Z)-[(3R,4R)-3-ethyl-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1H-pyrrol-2-yl]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid

Chemical Descriptors

Stereo SMILES (CACTVS)	CC[C@@H]1[C@@H](C)C(=O)N\C1=C/c2[nH]c(Cc3[nH]c(CC4=NC(=O)C(=C4C)C=C)c(C)c3CCC(O)=O)c(CCC(O)=O)c2C
SMILES (CACTVS)	CC[CH]1[CH](C)C(=O)NC1=Cc2[nH]c(Cc3[nH]c(CC4=NC(=O)C(=C4C)C=C)c(C)c3CCC(O)=O)c(CCC(O)=O)c2C
Stereo SMILES (OpenEye)	CC[C@@H]\1[C@H](C(=O)N/C1=C\c2c(c(c([nH]2)Cc3c(c(c([nH]3)CC4=NC(=O)C(=C4C)C=C)C)CCC(=O)O)CCC(=O)O)C)C
InChI descriptor	InChI=1S/C33H40N4O6/c1-7-20-19(6)32(42)37-27(20)14-25-18(5)23(10-12-31(40)41)29(35-25)15-28-22(9-11-30(38)39)17(4)24(34-28)13-26-16(3)21(8-2)33(43)36-26/h8,14,19-20,34-35H,2,7,9-13,15H2,1,3-6H3,(H,37,42)(H,38,39)(H,40,41)/b27-14-/t19-,20-/m1/s1
InChIKey descriptor	OTCFLTZTYFVISX-GBQRZCIWSA-N

Status Information