PDB Chemical Component 2V8
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 2V8
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O33 |
C31 |
1.316 |
1.215 |
| O32 |
C31 |
1.210 |
1.348 |
| C31 |
C18 |
1.459 |
1.471 |
| C18 |
N17 |
1.428 |
1.347 |
| C18 |
C19 |
1.341 |
1.391 |
| N17 |
C16 |
1.246 |
1.311 |
| C19 |
C20 |
1.508 |
1.476 |
| C19 |
N15 |
1.313 |
1.371 |
| C20 |
C28 |
1.403 |
1.397 |
| C20 |
C21 |
1.390 |
1.397 |
| C28 |
C26 |
1.396 |
1.380 |
| C26 |
C24 |
1.398 |
1.384 |
| C21 |
C23 |
1.396 |
1.380 |
| C23 |
C24 |
1.403 |
1.385 |
| C23 |
CL2 |
1.730 |
1.737 |
| C16 |
N15 |
1.303 |
1.370 |
| C16 |
C35 |
1.510 |
1.478 |
| C45 |
C38 |
1.526 |
1.508 |
| C36 |
C35 |
1.398 |
1.395 |
| C36 |
C38 |
1.400 |
1.380 |
| N15 |
C5 |
1.362 |
1.401 |
| C35 |
C43 |
1.404 |
1.397 |
| C38 |
C39 |
1.395 |
1.383 |
| C3 |
C5 |
1.419 |
1.388 |
| C3 |
C2 |
1.403 |
1.382 |
| C5 |
C6 |
1.407 |
1.389 |
| C43 |
C41 |
1.398 |
1.379 |
| C39 |
C41 |
1.398 |
1.384 |
| CL1 |
C2 |
1.761 |
1.737 |
| C2 |
C9 |
1.394 |
1.383 |
| C6 |
C11 |
1.522 |
1.507 |
| C6 |
C7 |
1.407 |
1.381 |
| C9 |
C7 |
1.403 |
1.383 |
| C3 |
H1 |
1.080 |
1.079 |
| C7 |
H2 |
1.080 |
1.081 |
| C9 |
H3 |
1.080 |
1.080 |
| C11 |
H4 |
1.100 |
1.091 |
| C11 |
H5 |
1.100 |
1.090 |
| C11 |
H6 |
1.100 |
1.090 |
| C21 |
H7 |
1.080 |
1.079 |
| C24 |
H8 |
1.080 |
1.080 |
| C26 |
H9 |
1.080 |
1.080 |
| C28 |
H10 |
1.080 |
1.080 |
| O32 |
H11 |
0.950 |
0.967 |
| C36 |
H12 |
1.080 |
1.079 |
| C39 |
H13 |
1.080 |
1.079 |
| C41 |
H14 |
1.080 |
1.080 |
| C43 |
H15 |
1.080 |
1.080 |
| C45 |
H16 |
1.100 |
1.090 |
| C45 |
H17 |
1.101 |
1.090 |
| C45 |
H18 |
1.099 |
1.090 |
Bond Angles for 2V8
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C18 |
C19 |
C20 |
126.1 |
126.8 |
| N17 |
C16 |
C35 |
120.8 |
125.4 |
| C19 |
C20 |
C28 |
117.3 |
120.1 |
| C19 |
C20 |
C21 |
122.6 |
120.2 |
| C21 |
C20 |
C28 |
120.0 |
119.7 |
| C20 |
C28 |
C26 |
121.3 |
119.8 |
| C20 |
C28 |
H10 |
119.3 |
120.1 |
| C20 |
C21 |
C23 |
118.5 |
119.8 |
| C20 |
C21 |
H7 |
120.8 |
120.1 |
| C28 |
C26 |
H9 |
120.5 |
119.9 |
| C26 |
C24 |
H8 |
120.4 |
119.8 |
| C21 |
C23 |
C24 |
122.1 |
120.2 |
| C21 |
C23 |
CL2 |
117.7 |
119.9 |
| C23 |
C21 |
H7 |
120.8 |
120.1 |
| C24 |
C23 |
CL2 |
120.3 |
119.9 |
| C23 |
C24 |
H8 |
120.4 |
119.9 |
| C16 |
C35 |
C43 |
119.5 |
120.1 |
| C36 |
C35 |
C43 |
118.9 |
119.7 |
| C36 |
C38 |
C39 |
119.8 |
120.2 |
| C38 |
C36 |
H12 |
119.7 |
120.1 |
| C35 |
C43 |
C41 |
120.6 |
119.9 |
| C35 |
C43 |
H15 |
119.7 |
120.0 |
| C38 |
C39 |
C41 |
120.1 |
120.3 |
| C38 |
C39 |
H13 |
119.9 |
119.9 |
| C3 |
C5 |
C6 |
118.9 |
119.9 |
| C5 |
C3 |
H1 |
119.2 |
120.0 |
| C3 |
C2 |
C9 |
118.7 |
120.1 |
| C5 |
C6 |
C11 |
123.0 |
120.0 |
| C5 |
C6 |
C7 |
119.3 |
119.9 |
| C43 |
C41 |
H14 |
120.1 |
120.0 |
| C41 |
C39 |
H13 |
120.0 |
119.9 |
| C39 |
C41 |
H14 |
120.1 |
119.9 |
| CL1 |
C2 |
C9 |
119.8 |
119.9 |
| C2 |
C9 |
C7 |
120.6 |
120.1 |
| C2 |
C9 |
H3 |
119.7 |
120.0 |
| C7 |
C6 |
C11 |
117.6 |
120.0 |
| C6 |
C11 |
H4 |
109.5 |
109.5 |
| C6 |
C11 |
H5 |
109.5 |
109.5 |
| C6 |
C11 |
H6 |
109.5 |
109.5 |
| C6 |
C7 |
H2 |
119.5 |
119.9 |
| C9 |
C7 |
H2 |
119.6 |
120.0 |
| H4 |
C11 |
H5 |
109.5 |
109.4 |
| H4 |
C11 |
H6 |
109.5 |
109.5 |
| H5 |
C11 |
H6 |
109.5 |
109.5 |
| H16 |
C45 |
H17 |
109.4 |
109.5 |
| H16 |
C45 |
H18 |
109.4 |
109.5 |
| H17 |
C45 |
H18 |
109.5 |
109.4 |
Torsion Angles for 2V8
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C18 |
N17 |
C16 |
C35 |
182.3 |
180.0 |
| C18 |
C19 |
C20 |
C28 |
301.0 |
314.9 |
| C18 |
C19 |
C20 |
C21 |
125.1 |
135.3 |
| N17 |
C16 |
C35 |
C43 |
123.4 |
195.0 |
| C21 |
C20 |
C19 |
C28 |
184.1 |
180.4 |
| C19 |
C20 |
C28 |
C26 |
181.7 |
179.7 |
| C19 |
C20 |
C28 |
H10 |
1.7 |
0.1 |
| C19 |
C20 |
C21 |
C23 |
177.7 |
180.0 |
| C19 |
C20 |
C21 |
H7 |
357.7 |
359.9 |
| C19 |
C20 |
C28 |
C21 |
184.0 |
180.4 |
| C28 |
C20 |
C21 |
C23 |
1.9 |
0.4 |
| C28 |
C20 |
C21 |
H7 |
181.9 |
180.2 |
| C20 |
C28 |
C26 |
H9 |
181.7 |
180.3 |
| C19 |
C20 |
C21 |
C28 |
175.8 |
179.6 |
| C21 |
C20 |
C28 |
C26 |
357.7 |
359.4 |
| C21 |
C20 |
C28 |
H10 |
177.7 |
179.7 |
| C20 |
C21 |
C23 |
C24 |
358.9 |
359.9 |
| C20 |
C21 |
C23 |
CL2 |
179.0 |
179.9 |
| C23 |
C21 |
C20 |
H7 |
180.0 |
180.1 |
| C20 |
C28 |
C26 |
H10 |
180.0 |
180.4 |
| C28 |
C26 |
C24 |
H8 |
179.1 |
179.7 |
| C20 |
C28 |
C26 |
C24 |
1.7 |
0.6 |
| C26 |
C24 |
C23 |
CL2 |
180.4 |
180.0 |
| C23 |
C24 |
C26 |
H8 |
180.0 |
180.0 |
| C23 |
C21 |
C20 |
C28 |
1.9 |
0.4 |
| C20 |
C21 |
C23 |
H7 |
180.0 |
179.9 |
| C24 |
C23 |
C21 |
CL2 |
179.9 |
180.0 |
| C21 |
C23 |
C24 |
H8 |
180.6 |
180.0 |
| C26 |
C24 |
C23 |
H8 |
180.0 |
180.0 |
| C21 |
C23 |
C24 |
CL2 |
180.1 |
180.0 |
| C24 |
C23 |
C21 |
H7 |
178.9 |
180.1 |
| C21 |
C23 |
CL2 |
C24 |
179.9 |
180.0 |
| CL2 |
C23 |
C21 |
H7 |
359.0 |
0.1 |
| CL2 |
C23 |
C24 |
H8 |
0.5 |
360.0 |
| C36 |
C35 |
C16 |
C43 |
182.8 |
180.3 |
| C16 |
C35 |
C43 |
C41 |
181.1 |
179.7 |
| C16 |
C35 |
C43 |
H15 |
1.1 |
0.0 |
| C45 |
C38 |
C36 |
H12 |
358.6 |
0.1 |
| C45 |
C38 |
C39 |
H13 |
0.3 |
359.9 |
| C16 |
C35 |
C36 |
C43 |
177.2 |
179.7 |
| C36 |
C35 |
C43 |
C41 |
358.4 |
359.4 |
| C36 |
C35 |
C43 |
H15 |
178.4 |
179.7 |
| C38 |
C36 |
C35 |
C43 |
1.9 |
0.3 |
| C36 |
C38 |
C39 |
C41 |
0.0 |
0.1 |
| C36 |
C38 |
C39 |
H13 |
180.0 |
180.0 |
| N15 |
C5 |
C3 |
H1 |
0.3 |
0.0 |
| C35 |
C43 |
C41 |
H14 |
180.5 |
180.3 |
| C39 |
C38 |
C36 |
H12 |
178.8 |
180.0 |
| C41 |
C39 |
C38 |
H13 |
180.0 |
180.1 |
| C38 |
C39 |
C41 |
H14 |
180.3 |
179.9 |
| C5 |
C3 |
C2 |
C9 |
0.7 |
0.3 |
| C3 |
C5 |
C6 |
C11 |
180.2 |
180.0 |
| C3 |
C5 |
C6 |
C7 |
1.3 |
360.0 |
| CL1 |
C2 |
C3 |
C9 |
178.6 |
179.8 |
| C3 |
C2 |
C9 |
C7 |
359.7 |
359.4 |
| C3 |
C2 |
C9 |
H3 |
179.7 |
179.7 |
| C6 |
C5 |
C3 |
H1 |
178.8 |
180.1 |
| C7 |
C6 |
C5 |
C11 |
181.1 |
180.0 |
| C5 |
C6 |
C11 |
H4 |
90.6 |
90.0 |
| C5 |
C6 |
C11 |
H5 |
210.6 |
210.0 |
| C5 |
C6 |
C11 |
H6 |
330.6 |
330.0 |
| C5 |
C6 |
C7 |
H2 |
179.0 |
180.0 |
| C35 |
C43 |
C41 |
H15 |
180.0 |
180.3 |
| C43 |
C41 |
C39 |
H13 |
180.3 |
179.8 |
| C39 |
C41 |
C43 |
H14 |
180.0 |
180.3 |
| C35 |
C43 |
C41 |
C39 |
0.5 |
0.6 |
| C38 |
C39 |
C41 |
H13 |
180.0 |
179.9 |
| C43 |
C41 |
C39 |
H14 |
180.0 |
179.7 |
| C3 |
C2 |
CL1 |
C9 |
181.4 |
180.2 |
| CL1 |
C2 |
C9 |
C7 |
181.1 |
179.7 |
| CL1 |
C2 |
C9 |
H3 |
1.0 |
360.0 |
| C2 |
C9 |
C7 |
H2 |
180.4 |
180.3 |
| C5 |
C6 |
C11 |
C7 |
181.0 |
180.0 |
| C11 |
C6 |
C7 |
H2 |
0.0 |
360.0 |
| H4 |
C11 |
C6 |
H5 |
240.0 |
240.0 |
| H4 |
C11 |
C6 |
H6 |
120.0 |
120.0 |
| H5 |
C11 |
C6 |
H6 |
240.0 |
240.0 |
| C5 |
C6 |
C7 |
C11 |
179.0 |
180.0 |
| C2 |
C9 |
C7 |
C6 |
0.4 |
0.6 |
| C7 |
C6 |
C11 |
H4 |
269.5 |
270.0 |
| C7 |
C6 |
C11 |
H5 |
29.5 |
30.0 |
| C7 |
C6 |
C11 |
H6 |
149.5 |
150.0 |
| C9 |
C7 |
C6 |
H2 |
180.0 |
179.7 |
| C2 |
C9 |
C7 |
H3 |
180.0 |
180.3 |
| C9 |
C7 |
C6 |
C11 |
180.0 |
179.7 |
| C6 |
C7 |
C9 |
H2 |
180.0 |
180.3 |
| H1 |
C3 |
C5 |
C6 |
178.8 |
180.1 |
| H1 |
C3 |
C2 |
C9 |
180.7 |
180.2 |
| H2 |
C7 |
C6 |
C11 |
0.0 |
360.0 |
| C2 |
C9 |
H3 |
C7 |
180.0 |
179.7 |
| H3 |
C9 |
C7 |
H2 |
0.5 |
360.0 |
| C6 |
C11 |
H4 |
H5 |
120.0 |
120.0 |
| C6 |
C11 |
H4 |
H6 |
240.0 |
240.0 |
| H5 |
C11 |
H4 |
H6 |
120.0 |
120.0 |
| C6 |
C11 |
H5 |
H4 |
240.0 |
240.0 |
| C6 |
C11 |
H5 |
H6 |
120.0 |
120.0 |
| H4 |
C11 |
H5 |
H6 |
240.0 |
240.0 |
| C6 |
C11 |
H6 |
H4 |
120.0 |
120.0 |
| C6 |
C11 |
H6 |
H5 |
240.0 |
240.0 |
| H4 |
C11 |
H6 |
H5 |
120.0 |
119.9 |
| H7 |
C21 |
C20 |
C28 |
181.9 |
180.2 |
| C20 |
C21 |
H7 |
C23 |
180.0 |
180.1 |
| H7 |
C21 |
C23 |
C24 |
178.9 |
180.1 |
| H7 |
C21 |
C23 |
CL2 |
359.0 |
0.1 |
| H8 |
C24 |
C23 |
CL2 |
0.5 |
360.0 |
| H9 |
C26 |
C24 |
H8 |
359.2 |
0.0 |
| C20 |
C28 |
H10 |
C26 |
180.0 |
179.6 |
| H10 |
C28 |
C26 |
H9 |
1.7 |
359.9 |
| H12 |
C36 |
C35 |
C43 |
181.9 |
180.2 |
| H12 |
C36 |
C38 |
C39 |
178.8 |
180.0 |
| C38 |
C39 |
H13 |
C41 |
180.0 |
180.1 |
| H13 |
C39 |
C41 |
H14 |
0.3 |
0.0 |
| H14 |
C41 |
C39 |
H13 |
0.3 |
0.0 |
| C35 |
C43 |
H15 |
C41 |
180.0 |
179.7 |
| H15 |
C43 |
C41 |
H14 |
0.5 |
0.0 |
| H17 |
C45 |
H16 |
H18 |
120.0 |
120.0 |
| H16 |
C45 |
H17 |
H18 |
240.0 |
240.0 |
| H16 |
C45 |
H18 |
H17 |
120.0 |
120.0 |