Atom Nomenclature for 2TW

The atom nomenclature in PDB data files was revised with the release of data in the PDB Format Version 3.0. These changes make the PDB atom names used by PDB compliant with existing IUPAC nomenclature for standard amino acid and nucleotides (Pure & Appl. Chem., 70, 117-142, 1998) with the exception of the well established convention for C-terminal atoms OXT and HXT. A small number of additional changes were introduced in Version 3 to make atom labeling more conventional. The following chemical diagrams and tables provide the correspondences between atom names used in Version 3 and Version 2 PDB formats.

Labeled Chemical Diagrams

Chemical diagram with format V3 atom labels (heavy atoms)
Chemical diagram with format V3 atom labels (all atoms)
Chemical diagram with format V2 atom labels (heavy atoms)
Chemical diagram with format V2 atom labels (all atoms)

Atom Name Correspondences for 2TW

Atom Name (V3) Atom Name (V2)
C14 C14
C13 C13
CL2 CL2
C12 C12
C11 C11
C10 C10
C9 C9
C8 C8
O1 O1
C23 C23
C25 C25
C26 C26
O4 O4
O3 O3
C24 C24
O2 O2
N1 N1
C15 C15
C16 C16
C22 C22
C27 C27
C17 C17
S1 S1
O5 O5
O6 O6
C18 C18
C20 C20
C21 C21
C19 C19
C7 C7
C5 C5
C4 C4
C3 C3
C2 C2
CL1 CL1
C1 C1
C6 C6
H1 H1
H2 H2
H3 H3
H4 H4
H5 H5
H6 H6
H7 H7
H8 H8
H9 H9
H10 H10
H11 H11
H12 H12
H13 H13
H14 H14
H15 H15
H16 H16
H17 H17
H18 H18
H19 H19
H20 H20
H21 H21
H22 H22
H23 H23
H24 H24
H25 H25
H26 H26
H27 H27
H28 H28
H29 H29
H30 H30
H31 H31