PDB Chemical Component 2TB

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 2TB

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.535	1.530
C1	C6	1.537	1.530
C1	N1	1.502	1.469
C1	H1	1.098	1.091
C2	C3	1.526	1.530
C2	H21	1.100	1.090
C2	H22	1.084	1.090
C3	C4	1.522	1.530
C3	N3	1.499	1.468
C3	H3	1.104	1.090
C4	C5	1.531	1.530
C4	O4	1.439	1.429
C4	H4	1.102	1.090
C5	C6	1.539	1.531
C5	O5	1.422	1.429
C5	H5	1.099	1.090
C6	O6	1.443	1.429
C6	H6	1.099	1.090
N1	HN11	1.046	1.009
N1	HN12	1.048	1.009
N1	HN13	1.042	1.009
N3	HN31	1.038	1.009
N3	HN32	1.043	1.009
N3	HN33	1.055	1.010
O5	HO5	0.966	0.967
O4	HO4	0.950	0.967
O6	HO6	0.950	0.967

Bond Angles for 2TB

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	C6	113.8	109.5
C2	C1	N1	110.6	109.5
C2	C1	H1	110.6	109.5
C1	C2	C3	112.2	109.5
C1	C2	H21	109.3	109.4
C1	C2	H22	110.1	109.4
C6	C1	N1	108.9	109.5
C6	C1	H1	105.9	109.5
C1	C6	C5	111.2	109.5
C1	C6	O6	108.0	109.5
C1	C6	H6	111.3	109.5
N1	C1	H1	106.6	109.5
C1	N1	HN11	111.3	109.4
C1	N1	HN12	113.9	109.5
C1	N1	HN13	109.6	109.4
C3	C2	H21	109.6	109.5
C3	C2	H22	109.3	109.5
C2	C3	C4	108.4	109.5
C2	C3	N3	111.0	109.5
C2	C3	H3	112.8	109.5
H21	C2	H22	106.1	109.5
C4	C3	N3	111.4	109.4
C4	C3	H3	105.2	109.5
C3	C4	C5	109.5	109.5
C3	C4	O4	110.5	109.5
C3	C4	H4	112.2	109.5
N3	C3	H3	107.9	109.5
C3	N3	HN31	108.7	109.5
C3	N3	HN32	113.6	109.5
C3	N3	HN33	111.4	109.5
C5	C4	O4	110.0	109.4
C5	C4	H4	114.3	109.4
C4	C5	C6	110.5	109.5
C4	C5	O5	109.3	109.5
C4	C5	H5	108.7	109.4
O4	C4	H4	100.1	109.5
C4	O4	HO4	110.5	106.8
C6	C5	O5	110.3	109.5
C6	C5	H5	108.5	109.4
C5	C6	O6	109.8	109.5
C5	C6	H6	107.6	109.4
O5	C5	H5	109.4	109.5
C5	O5	HO5	113.4	106.8
O6	C6	H6	109.1	109.5
C6	O6	HO6	108.0	106.8
HN11	N1	HN12	108.2	109.5
HN11	N1	HN13	105.8	109.5
HN12	N1	HN13	107.6	109.5
HN31	N3	HN32	108.7	109.4
HN31	N3	HN33	106.0	109.4
HN32	N3	HN33	108.3	109.4

Torsion Angles for 2TB

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C6	C1	C2	N1	123.0	120.0
C6	C1	C2	H1	240.9	240.0
C2	C1	C6	C5	47.1	60.0
C2	C1	C6	O6	167.6	180.0
C2	C1	C6	H6	287.2	300.0
N1	C1	C2	H1	117.8	120.0
C2	C1	N1	HN11	296.9	60.0
C2	C1	N1	HN12	59.5	300.0
C2	C1	N1	HN13	180.2	180.0
C3	C2	C1	H21	121.8	239.9
C3	C2	C1	H22	238.0	120.0
C1	C2	C3	C4	57.1	60.0
C1	C2	C3	N3	179.8	180.0
C1	C2	C3	H3	301.0	300.0
H21	C2	C1	H22	116.2	240.0
C2	C1	C6	N1	236.0	240.0
C2	C1	C6	H1	121.8	120.0
C6	C1	C2	C3	310.2	300.0
C6	C1	C2	H21	188.4	60.0
C6	C1	C2	H22	72.2	180.0
N1	C1	C6	H1	245.7	240.0
C6	C1	N1	HN11	171.0	300.0
C6	C1	N1	HN12	293.6	179.9
C6	C1	N1	HN13	54.3	60.0
C4	C5	C6	C1	306.8	300.1
C1	C6	C5	O5	185.7	180.0
C1	C6	C5	H5	65.9	60.0
C5	C6	C1	O6	239.6	240.0
C5	C6	C1	H6	119.9	120.0
O6	C6	C1	H6	240.3	240.0
C1	C6	O6	HO6	180.0	180.0
C2	C1	N1	C6	125.9	120.0
C2	C1	N1	H1	239.7	240.0
N1	C1	C2	C3	187.1	180.0
N1	C1	C2	H21	65.3	300.0
N1	C1	C2	H22	309.1	60.0
C6	C1	N1	H1	113.8	120.0
N1	C1	C6	C5	171.1	180.0
N1	C1	C6	O6	291.5	300.0
N1	C1	C6	H6	51.2	60.0
HN11	N1	C1	HN12	237.4	120.1
HN11	N1	C1	HN13	116.7	240.0
HN12	N1	C1	HN13	239.3	120.0
C2	C1	H1	C6	236.2	240.0
C2	C1	H1	N1	120.3	120.0
H1	C1	C2	C3	69.3	60.0
H1	C1	C2	H21	307.5	180.0
H1	C1	C2	H22	191.3	300.0
C6	C1	H1	N1	244.1	240.0
H1	C1	C6	C5	285.3	300.0
H1	C1	C6	O6	45.8	60.0
H1	C1	C6	H6	165.5	180.0
H1	C1	N1	HN11	57.2	180.0
H1	C1	N1	HN12	179.8	60.0
H1	C1	N1	HN13	300.5	300.0
C3	C2	C1	C6	310.2	300.0
C3	C2	C1	N1	187.1	180.0
C3	C2	C1	H1	69.3	60.0
C1	C2	C3	H21	238.4	120.0
C1	C2	C3	H22	122.4	240.1
H21	C2	C3	H22	244.0	120.1
C4	C3	C2	N3	237.3	240.1
C4	C3	C2	H3	116.0	120.0
C2	C3	C4	C5	296.4	300.0
C2	C3	C4	O4	175.1	180.0
C2	C3	C4	H4	64.3	59.9
N3	C3	C2	H3	238.8	240.0
C2	C3	N3	HN31	193.0	60.0
C2	C3	N3	HN32	314.1	180.0
C2	C3	N3	HN33	76.7	300.0
H21	C2	C1	C6	188.4	60.0
H21	C2	C1	N1	65.3	300.0
H21	C2	C1	H1	307.5	180.0
C1	C2	H21	C3	123.4	240.0
C1	C2	H21	H22	241.3	119.9
C3	C2	H21	H22	118.0	240.0
H21	C2	C3	C4	178.7	300.1
H21	C2	C3	N3	301.4	60.0
H21	C2	C3	H3	62.6	180.0
H22	C2	C1	C6	72.2	180.0
H22	C2	C1	N1	309.1	60.0
H22	C2	C1	H1	191.3	300.0
C1	C2	H22	C3	236.3	120.0
C1	C2	H22	H21	118.1	240.1
C3	C2	H22	H21	241.8	120.1
H22	C2	C3	C4	294.6	180.0
H22	C2	C3	N3	57.3	299.9
H22	C2	C3	H3	178.6	60.0
C4	C3	C2	H21	178.7	300.1
C4	C3	C2	H22	294.6	180.0
C2	C3	C4	N3	122.5	120.0
C2	C3	C4	H3	239.1	240.0
N3	C3	C4	H3	116.6	120.0
C4	C3	N3	HN31	314.0	180.0
C4	C3	N3	HN32	75.1	300.0
C4	C3	N3	HN33	197.7	60.0
C5	C4	C3	O4	121.3	119.9
C5	C4	C3	H4	232.0	240.0
C3	C4	C5	C6	62.6	60.0
C3	C4	C5	O5	184.2	180.0
C3	C4	C5	H5	303.6	300.1
O4	C4	C3	H4	110.7	120.1
C3	C4	O4	HO4	180.0	180.0
N3	C3	C2	H21	301.4	60.0
N3	C3	C2	H22	57.3	299.9
C2	C3	N3	C4	239.0	240.0
C2	C3	N3	H3	124.1	120.0
C4	C3	N3	H3	245.0	240.0
N3	C3	C4	C5	173.9	180.0
N3	C3	C4	O4	52.6	60.1
N3	C3	C4	H4	301.9	300.0
HN31	N3	C3	HN32	238.9	240.0
HN31	N3	C3	HN33	116.3	120.0
HN32	N3	C3	HN33	237.4	240.0
H3	C3	C2	H21	62.6	180.0
H3	C3	C2	H22	178.6	60.0
C2	C3	H3	C4	118.0	120.0
C2	C3	H3	N3	237.0	240.0
C4	C3	H3	N3	119.0	120.0
H3	C3	C4	C5	57.2	60.0
H3	C3	C4	O4	296.0	300.0
H3	C3	C4	H4	185.2	179.9
H3	C3	N3	HN31	68.9	300.0
H3	C3	N3	HN32	190.0	60.0
H3	C3	N3	HN33	312.6	180.0
C1	C6	C5	C4	306.8	300.1
C5	C4	C3	N3	173.9	180.0
C5	C4	C3	H3	57.2	60.0
C3	C4	C5	O4	238.4	240.0
C3	C4	C5	H4	126.8	120.0
O4	C4	C5	H4	248.4	240.0
C5	C4	O4	HO4	59.1	60.0
C6	C5	C4	O5	238.4	240.0
C6	C5	C4	H5	119.0	119.9
C4	C5	C6	O6	187.4	180.0
C4	C5	C6	H6	68.8	60.0
O5	C5	C4	H5	240.6	239.9
C4	C5	O5	HO5	171.1	180.0
O4	C4	C3	N3	52.6	60.1
O4	C4	C3	H3	296.0	300.0
C3	C4	O4	C5	121.0	120.0
C3	C4	O4	H4	241.6	239.9
C5	C4	O4	H4	120.6	120.0
O4	C4	C5	C6	184.2	180.0
O4	C4	C5	O5	305.8	300.0
O4	C4	C5	H5	65.2	60.1
H4	C4	C3	N3	301.9	300.0
H4	C4	C3	H3	185.2	179.9
C3	C4	H4	C5	234.6	240.0
C3	C4	H4	O4	117.2	120.1
C5	C4	H4	O4	242.5	240.0
H4	C4	C5	C6	295.8	300.0
H4	C4	C5	O5	57.4	60.0
H4	C4	C5	H5	176.8	180.1
H4	C4	O4	HO4	298.4	300.1
C5	C6	C1	N1	171.1	180.0
C5	C6	C1	H1	285.3	300.0
C1	C6	C5	O6	119.4	120.1
C1	C6	C5	H6	238.0	240.0
C6	C5	C4	O4	184.2	180.0
C6	C5	C4	H4	295.8	300.0
C4	C5	C6	O5	121.0	120.0
C4	C5	C6	H5	240.9	240.1
O5	C5	C6	H5	119.8	120.0
C6	C5	O5	HO5	292.8	300.0
O6	C6	C5	H6	118.6	120.0
C5	C6	O6	HO6	301.3	300.1
O5	C5	C4	O4	305.8	300.0
O5	C5	C4	H4	57.4	60.0
C4	C5	O5	C6	238.3	240.0
C4	C5	O5	H5	119.0	120.0
C6	C5	O5	H5	240.7	240.0
O5	C5	C6	O6	66.4	60.0
O5	C5	C6	H6	307.8	300.0
H5	C5	C4	O4	65.2	60.1
H5	C5	C4	H4	176.8	180.1
C4	C5	H5	C6	120.3	119.9
C4	C5	H5	O5	240.6	239.9
C6	C5	H5	O5	120.4	120.0
H5	C5	C6	O6	306.6	299.9
H5	C5	C6	H6	188.0	180.0
H5	C5	O5	HO5	52.1	60.0
O6	C6	C1	N1	291.5	300.0
O6	C6	C1	H1	45.8	60.0
C1	C6	O6	C5	238.7	240.0
C1	C6	O6	H6	121.0	120.0
O6	C6	C5	O5	66.4	60.0
O6	C6	C5	H5	306.6	299.9
C5	C6	O6	H6	242.3	240.0
H6	C6	C1	N1	51.2	60.0
H6	C6	C1	H1	165.5	180.0
C1	C6	H6	C5	122.0	120.0
C1	C6	H6	O6	241.0	240.0
H6	C6	C5	O5	307.8	300.0
H6	C6	C5	H5	188.0	180.0
C5	C6	H6	O6	119.0	120.0
H6	C6	O6	HO6	58.9	60.0
HN11	N1	C1	H1	57.2	180.0
C1	N1	HN11	HN12	125.9	240.0
C1	N1	HN11	HN13	241.0	119.9
HN12	N1	HN11	HN13	115.1	239.9
HN12	N1	C1	H1	179.8	60.0
C1	N1	HN12	HN11	235.7	120.0
C1	N1	HN12	HN13	121.8	240.1
HN11	N1	HN12	HN13	246.1	120.1
HN13	N1	C1	H1	300.5	300.0
C1	N1	HN13	HN11	120.1	240.1
C1	N1	HN13	HN12	235.6	120.0
HN11	N1	HN13	HN12	115.5	239.9
HN31	N3	C3	H3	68.9	300.0
C3	N3	HN31	HN32	124.0	120.1
C3	N3	HN31	HN33	240.2	240.0
HN32	N3	HN31	HN33	116.2	119.9
HN32	N3	C3	H3	190.0	60.0
C3	N3	HN32	HN31	239.0	239.9
C3	N3	HN32	HN33	124.3	120.1
HN31	N3	HN32	HN33	245.3	240.1
HN33	N3	C3	H3	312.6	180.0
C3	N3	HN33	HN31	118.0	120.0
C3	N3	HN33	HN32	234.4	239.9
HN31	N3	HN33	HN32	116.5	119.9
HO5	O5	C5	H5	52.1	60.0
HO4	O4	C4	H4	298.4	300.1
HO6	O6	C6	H6	58.9	60.0