Atom Nomenclature for 2S7

The atom nomenclature in PDB data files was revised with the release of data in the PDB Format Version 3.0. These changes make the PDB atom names used by PDB compliant with existing IUPAC nomenclature for standard amino acid and nucleotides (Pure & Appl. Chem., 70, 117-142, 1998) with the exception of the well established convention for C-terminal atoms OXT and HXT. A small number of additional changes were introduced in Version 3 to make atom labeling more conventional. The following chemical diagrams and tables provide the correspondences between atom names used in Version 3 and Version 2 PDB formats.

Labeled Chemical Diagrams

Chemical diagram with format V3 atom labels (heavy atoms)
Chemical diagram with format V3 atom labels (all atoms)
Chemical diagram with format V2 atom labels (heavy atoms)
Chemical diagram with format V2 atom labels (all atoms)

Atom Name Correspondences for 2S7

Atom Name (V3) Atom Name (V2)
CAJ CAJ
CAH CAH
CAY CAY
CAC CAC
NAA NAA
CAI CAI
CAK CAK
CAZ CAZ
OAX OAX
CAO CAO
CAN CAN
CAT CAT
NBD NBD
CAV CAV
CAS CAS
CAU CAU
CAR CAR
CBC CBC
CBE CBE
CBB CBB
CAP CAP
CAL CAL
CAM CAM
CAQ CAQ
OAB OAB
CBA CBA
NAW NAW
CAF CAF
CAD CAD
CAE CAE
CAG CAG
H1 H1
H2 H2
H3 H3
H4 H4
H5 H5
H6 H6
H7 H7
H8 H8
H9 H9
H10 H10
H12 H12
H13 H13
H14 H14
H15 H15
H16 H16
H17 H17
H18 H18
H19 H19
H20 H20
H21 H21
H22 H22
H23 H23
H24 H24
H25 H25
H26 H26
H27 H27
H28 H28
H29 H29
H30 H30
H31 H31
H32 H32
H33 H33
H34 H34