PDB Chemical Component 2S4
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 2S4
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C4 |
C6 |
1.382 |
1.383 |
| C4 |
C2 |
1.394 |
1.382 |
| C11 |
C2 |
1.519 |
1.507 |
| C11 |
C12 |
1.518 |
1.507 |
| C6 |
C5 |
1.392 |
1.386 |
| C2 |
C1 |
1.399 |
1.382 |
| C5 |
O9 |
1.390 |
1.360 |
| C5 |
C3 |
1.421 |
1.392 |
| C1 |
C3 |
1.404 |
1.385 |
| O9 |
C10 |
1.434 |
1.429 |
| C3 |
O7 |
1.358 |
1.360 |
| N13 |
C12 |
1.379 |
1.347 |
| N13 |
C14 |
1.375 |
1.382 |
| C12 |
O15 |
1.219 |
1.213 |
| O7 |
C8 |
1.421 |
1.429 |
| N17 |
C14 |
1.276 |
1.302 |
| C14 |
N16 |
1.394 |
1.375 |
| N16 |
C18 |
1.478 |
1.465 |
| C22 |
C20 |
1.384 |
1.382 |
| C22 |
C19 |
1.398 |
1.382 |
| C20 |
C21 |
1.395 |
1.382 |
| C18 |
C19 |
1.518 |
1.507 |
| C19 |
C24 |
1.407 |
1.382 |
| C21 |
C25 |
1.510 |
1.507 |
| C21 |
C23 |
1.400 |
1.382 |
| C24 |
C23 |
1.391 |
1.382 |
| C1 |
H1 |
1.080 |
1.080 |
| C8 |
H2 |
1.100 |
1.090 |
| C8 |
H3 |
1.100 |
1.090 |
| C8 |
H4 |
1.100 |
1.090 |
| C10 |
H5 |
1.100 |
1.089 |
| C10 |
H6 |
1.100 |
1.090 |
| C10 |
H7 |
1.100 |
1.090 |
| C11 |
H8 |
1.100 |
1.090 |
| C11 |
H9 |
1.100 |
1.090 |
| C20 |
H10 |
1.080 |
1.080 |
| C22 |
H11 |
1.080 |
1.080 |
| C24 |
H12 |
1.079 |
1.080 |
| C4 |
H13 |
1.080 |
1.080 |
| C6 |
H14 |
1.080 |
1.080 |
| N13 |
H15 |
1.000 |
0.970 |
| N17 |
H16 |
1.000 |
0.970 |
| N16 |
H17 |
1.000 |
0.970 |
| C18 |
H18 |
1.100 |
1.090 |
| C18 |
H19 |
1.100 |
1.090 |
| C23 |
H20 |
1.080 |
1.081 |
| C25 |
H21 |
1.100 |
1.090 |
| C25 |
H22 |
1.099 |
1.090 |
| C25 |
H23 |
1.100 |
1.089 |
Bond Angles for 2S4
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C4 |
C6 |
C5 |
119.8 |
119.9 |
| C6 |
C4 |
H13 |
118.9 |
119.9 |
| C4 |
C6 |
H14 |
120.1 |
120.0 |
| C11 |
C12 |
O15 |
120.7 |
120.0 |
| C12 |
C11 |
H8 |
110.0 |
109.4 |
| C12 |
C11 |
H9 |
110.0 |
109.4 |
| C6 |
C5 |
O9 |
118.7 |
120.0 |
| C5 |
C6 |
H14 |
120.1 |
120.1 |
| C2 |
C1 |
C3 |
118.7 |
120.0 |
| C2 |
C1 |
H1 |
120.6 |
120.0 |
| C5 |
C3 |
O7 |
120.6 |
120.1 |
| C1 |
C3 |
O7 |
118.1 |
120.1 |
| C3 |
C1 |
H1 |
120.7 |
120.0 |
| O9 |
C10 |
H5 |
109.5 |
109.5 |
| O9 |
C10 |
H6 |
109.5 |
109.5 |
| O9 |
C10 |
H7 |
109.5 |
109.4 |
| C3 |
O7 |
C8 |
122.1 |
117.0 |
| N13 |
C14 |
N16 |
126.4 |
120.0 |
| O7 |
C8 |
H2 |
109.5 |
109.5 |
| O7 |
C8 |
H3 |
109.5 |
109.5 |
| O7 |
C8 |
H4 |
109.5 |
109.5 |
| N17 |
C14 |
N16 |
121.4 |
120.0 |
| C14 |
N16 |
C18 |
125.2 |
120.0 |
| C14 |
N16 |
H17 |
117.4 |
120.0 |
| C18 |
N16 |
H17 |
117.4 |
120.0 |
| N16 |
C18 |
H18 |
107.1 |
109.5 |
| N16 |
C18 |
H19 |
107.0 |
109.4 |
| C22 |
C20 |
H10 |
120.0 |
120.0 |
| C22 |
C19 |
C24 |
120.9 |
120.0 |
| C20 |
C21 |
C25 |
117.9 |
120.0 |
| C20 |
C21 |
C23 |
121.3 |
120.0 |
| C21 |
C20 |
H10 |
120.0 |
120.0 |
| C19 |
C24 |
C23 |
119.6 |
120.0 |
| C19 |
C24 |
H12 |
120.2 |
120.0 |
| C23 |
C21 |
C25 |
120.8 |
120.0 |
| C21 |
C25 |
H21 |
109.5 |
109.5 |
| C21 |
C25 |
H22 |
109.5 |
109.5 |
| C21 |
C25 |
H23 |
109.5 |
109.4 |
| C21 |
C23 |
C24 |
118.9 |
120.0 |
| C21 |
C23 |
H20 |
120.5 |
120.0 |
| C23 |
C24 |
H12 |
120.2 |
120.0 |
| C24 |
C23 |
H20 |
120.6 |
120.0 |
| H2 |
C8 |
H3 |
109.5 |
109.5 |
| H2 |
C8 |
H4 |
109.5 |
109.4 |
| H3 |
C8 |
H4 |
109.5 |
109.5 |
| H5 |
C10 |
H6 |
109.5 |
109.5 |
| H5 |
C10 |
H7 |
109.5 |
109.4 |
| H6 |
C10 |
H7 |
109.5 |
109.4 |
| H8 |
C11 |
H9 |
109.5 |
109.5 |
| H18 |
C18 |
H19 |
109.4 |
109.4 |
| H21 |
C25 |
H22 |
109.5 |
109.5 |
| H21 |
C25 |
H23 |
109.5 |
109.5 |
| H22 |
C25 |
H23 |
109.5 |
109.5 |
Torsion Angles for 2S4
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C4 |
C6 |
C5 |
O9 |
180.3 |
180.0 |
| C5 |
C6 |
C4 |
H14 |
180.0 |
180.4 |
| C4 |
C2 |
C1 |
H1 |
182.4 |
179.7 |
| C11 |
C2 |
C1 |
H1 |
357.7 |
359.7 |
| H8 |
C11 |
C12 |
H9 |
120.6 |
120.0 |
| C5 |
C6 |
C4 |
H13 |
179.6 |
180.1 |
| C4 |
C6 |
C5 |
H14 |
180.0 |
179.6 |
| C6 |
C5 |
C3 |
O7 |
183.2 |
180.6 |
| C2 |
C1 |
C3 |
O7 |
175.7 |
179.7 |
| C3 |
C1 |
C2 |
H1 |
180.0 |
180.2 |
| O9 |
C5 |
C6 |
H14 |
0.3 |
0.4 |
| O9 |
C5 |
C3 |
O7 |
2.8 |
0.0 |
| C5 |
O9 |
C10 |
H5 |
180.0 |
300.0 |
| C5 |
O9 |
C10 |
H6 |
300.0 |
60.1 |
| C5 |
O9 |
C10 |
H7 |
60.0 |
180.0 |
| C1 |
C3 |
C5 |
O7 |
178.6 |
180.0 |
| C5 |
C3 |
C1 |
H1 |
177.1 |
180.0 |
| C5 |
C3 |
O7 |
C8 |
277.9 |
180.0 |
| C2 |
C1 |
C3 |
H1 |
180.0 |
179.8 |
| C5 |
C3 |
C1 |
O7 |
181.4 |
180.0 |
| C1 |
C3 |
O7 |
C8 |
99.2 |
0.0 |
| H5 |
C10 |
O9 |
H6 |
240.0 |
239.9 |
| H5 |
C10 |
O9 |
H7 |
120.0 |
119.9 |
| H6 |
C10 |
O9 |
H7 |
240.0 |
240.1 |
| O7 |
C3 |
C1 |
H1 |
355.7 |
360.0 |
| C3 |
O7 |
C8 |
H2 |
180.0 |
300.0 |
| C3 |
O7 |
C8 |
H3 |
300.0 |
60.0 |
| C3 |
O7 |
C8 |
H4 |
60.0 |
180.0 |
| N13 |
C12 |
C11 |
H8 |
160.1 |
59.9 |
| N13 |
C12 |
C11 |
H9 |
39.5 |
300.0 |
| N17 |
C14 |
N13 |
N16 |
178.1 |
180.0 |
| N13 |
C14 |
N16 |
C18 |
182.7 |
180.1 |
| N13 |
C14 |
N16 |
H17 |
2.7 |
360.0 |
| O15 |
C12 |
C11 |
H8 |
333.4 |
240.0 |
| O15 |
C12 |
C11 |
H9 |
212.7 |
120.0 |
| H2 |
C8 |
O7 |
H3 |
240.0 |
239.9 |
| H2 |
C8 |
O7 |
H4 |
120.0 |
119.9 |
| H3 |
C8 |
O7 |
H4 |
240.0 |
240.0 |
| N13 |
C14 |
N17 |
N16 |
181.8 |
180.0 |
| N17 |
C14 |
N16 |
C18 |
4.7 |
0.0 |
| N17 |
C14 |
N16 |
H17 |
184.7 |
179.9 |
| C18 |
N16 |
C14 |
H17 |
180.0 |
180.1 |
| C14 |
N16 |
C18 |
H18 |
8.2 |
60.0 |
| C14 |
N16 |
C18 |
H19 |
125.5 |
300.0 |
| C14 |
N16 |
C18 |
H17 |
180.0 |
179.9 |
| H18 |
C18 |
N16 |
H19 |
242.7 |
119.9 |
| C20 |
C22 |
C19 |
C24 |
1.4 |
360.0 |
| C22 |
C20 |
C21 |
C25 |
179.8 |
179.9 |
| C22 |
C20 |
C21 |
C23 |
359.6 |
359.9 |
| C21 |
C20 |
C22 |
H10 |
180.0 |
180.1 |
| C22 |
C19 |
C24 |
C23 |
356.9 |
0.1 |
| C22 |
C19 |
C24 |
H12 |
176.9 |
180.0 |
| C22 |
C20 |
C21 |
H10 |
180.0 |
179.9 |
| C23 |
C21 |
C20 |
C25 |
179.8 |
180.0 |
| C20 |
C21 |
C25 |
H21 |
89.9 |
90.0 |
| C20 |
C21 |
C25 |
H22 |
209.9 |
210.0 |
| C20 |
C21 |
C25 |
H23 |
329.9 |
330.0 |
| C20 |
C21 |
C23 |
C24 |
358.7 |
0.2 |
| C20 |
C21 |
C23 |
H20 |
178.7 |
180.0 |
| C14 |
N16 |
C18 |
C19 |
246.8 |
180.0 |
| C18 |
C19 |
C24 |
C23 |
179.0 |
180.3 |
| C18 |
C19 |
C24 |
H12 |
359.0 |
0.2 |
| C21 |
C23 |
C24 |
C19 |
3.0 |
359.8 |
| C23 |
C24 |
C19 |
H12 |
180.0 |
180.1 |
| C19 |
C24 |
C23 |
H20 |
183.0 |
180.1 |
| C20 |
C21 |
C25 |
C23 |
179.8 |
180.0 |
| C25 |
C21 |
C20 |
H10 |
359.8 |
360.0 |
| C25 |
C21 |
C23 |
C24 |
178.5 |
180.1 |
| C25 |
C21 |
C23 |
H20 |
358.5 |
359.9 |
| H21 |
C25 |
C21 |
H22 |
240.0 |
240.0 |
| H21 |
C25 |
C21 |
H23 |
120.0 |
120.0 |
| H22 |
C25 |
C21 |
H23 |
240.0 |
240.0 |
| C20 |
C21 |
C23 |
C25 |
180.2 |
180.0 |
| C23 |
C21 |
C20 |
H10 |
179.6 |
180.0 |
| C19 |
C24 |
C23 |
C21 |
3.0 |
359.8 |
| C23 |
C21 |
C25 |
H21 |
270.1 |
270.0 |
| C23 |
C21 |
C25 |
H22 |
30.1 |
30.0 |
| C23 |
C21 |
C25 |
H23 |
150.1 |
150.0 |
| C21 |
C23 |
C24 |
H12 |
183.0 |
180.0 |
| C24 |
C23 |
C21 |
H20 |
180.0 |
180.2 |
| C19 |
C24 |
C23 |
H12 |
180.0 |
179.9 |
| C24 |
C23 |
C21 |
C25 |
178.5 |
180.1 |
| C21 |
C23 |
C24 |
H20 |
180.0 |
179.8 |
| C2 |
C1 |
H1 |
C3 |
180.0 |
180.2 |
| H1 |
C1 |
C3 |
O7 |
355.7 |
360.0 |
| O7 |
C8 |
H2 |
H3 |
120.0 |
120.1 |
| O7 |
C8 |
H2 |
H4 |
240.0 |
240.0 |
| H3 |
C8 |
H2 |
H4 |
120.0 |
120.0 |
| O7 |
C8 |
H3 |
H2 |
240.0 |
239.9 |
| O7 |
C8 |
H3 |
H4 |
120.0 |
120.0 |
| H2 |
C8 |
H3 |
H4 |
240.0 |
240.1 |
| O7 |
C8 |
H4 |
H2 |
120.0 |
120.0 |
| O7 |
C8 |
H4 |
H3 |
240.0 |
240.0 |
| H2 |
C8 |
H4 |
H3 |
120.0 |
120.0 |
| O9 |
C10 |
H5 |
H6 |
120.0 |
120.1 |
| O9 |
C10 |
H5 |
H7 |
240.0 |
240.1 |
| H6 |
C10 |
H5 |
H7 |
120.0 |
120.0 |
| O9 |
C10 |
H6 |
H5 |
240.0 |
239.9 |
| O9 |
C10 |
H6 |
H7 |
120.0 |
119.9 |
| H5 |
C10 |
H6 |
H7 |
240.0 |
240.0 |
| O9 |
C10 |
H7 |
H5 |
120.0 |
120.0 |
| O9 |
C10 |
H7 |
H6 |
240.0 |
240.0 |
| H5 |
C10 |
H7 |
H6 |
120.0 |
120.1 |
| H8 |
C11 |
C12 |
O15 |
333.4 |
240.0 |
| C12 |
C11 |
H8 |
H9 |
239.1 |
240.1 |
| H9 |
C11 |
C12 |
O15 |
212.7 |
120.0 |
| C12 |
C11 |
H9 |
H8 |
121.0 |
119.9 |
| H10 |
C20 |
C21 |
C25 |
359.8 |
360.0 |
| H10 |
C20 |
C21 |
C23 |
179.6 |
180.0 |
| H11 |
C22 |
C20 |
H10 |
0.3 |
0.0 |
| H11 |
C22 |
C19 |
C24 |
181.4 |
179.9 |
| C19 |
C24 |
H12 |
C23 |
180.0 |
180.1 |
| H12 |
C24 |
C23 |
H20 |
3.0 |
0.2 |
| H13 |
C4 |
C6 |
C5 |
179.6 |
180.1 |
| H13 |
C4 |
C6 |
H14 |
359.6 |
359.7 |
| C4 |
C6 |
H14 |
C5 |
180.0 |
180.4 |
| H14 |
C6 |
C4 |
H13 |
359.6 |
359.7 |
| H14 |
C6 |
C5 |
O9 |
0.3 |
0.4 |
| H15 |
N13 |
C14 |
N16 |
181.5 |
360.0 |
| H16 |
N17 |
C14 |
N16 |
0.0 |
0.0 |
| C14 |
N16 |
H17 |
C18 |
180.0 |
180.1 |
| H17 |
N16 |
C18 |
H18 |
188.2 |
240.0 |
| H17 |
N16 |
C18 |
H19 |
305.5 |
120.1 |
| H18 |
C18 |
N16 |
H17 |
188.2 |
240.0 |
| N16 |
C18 |
H18 |
H19 |
115.6 |
240.1 |
| H19 |
C18 |
N16 |
H17 |
305.5 |
120.1 |
| N16 |
C18 |
H19 |
H18 |
244.3 |
120.0 |
| H20 |
C23 |
C21 |
C25 |
358.5 |
359.9 |
| C21 |
C23 |
H20 |
C24 |
180.0 |
180.2 |
| H20 |
C23 |
C24 |
H12 |
3.0 |
0.2 |
| C21 |
C25 |
H21 |
H22 |
120.0 |
120.0 |
| C21 |
C25 |
H21 |
H23 |
240.0 |
240.0 |
| H22 |
C25 |
H21 |
H23 |
120.0 |
120.1 |
| C21 |
C25 |
H22 |
H21 |
240.0 |
240.0 |
| C21 |
C25 |
H22 |
H23 |
120.0 |
120.0 |
| H21 |
C25 |
H22 |
H23 |
240.0 |
239.9 |
| C21 |
C25 |
H23 |
H21 |
120.0 |
120.0 |
| C21 |
C25 |
H23 |
H22 |
240.0 |
240.0 |
| H21 |
C25 |
H23 |
H22 |
120.0 |
120.0 |