PDB Chemical Component 2PU

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 2PU

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.563	1.502
C1	C3	1.452	1.398
C1	C4	1.425	1.382
C2	N5	1.476	1.484
C2	C6	1.517	1.542
C2	H2	1.115	1.090
C3	C7	1.494	1.479
C3	C8	1.419	1.395
C4	C9	1.431	1.391
C4	N10	1.441	1.399
N5	C7	1.379	1.338
N5	C11	1.457	1.468
C6	C12	1.517	1.549
C6	H61	1.115	1.090
C6	H62	1.115	1.091
C7	O13	1.247	1.215
C8	C14	1.433	1.380
C8	H8	1.103	1.080
C9	C14	1.413	1.383
C9	H9	1.103	1.079
N10	C15	1.339	1.347
N10	H10	1.020	0.970
C11	C12	1.548	1.544
C11	H111	1.115	1.090
C11	H112	1.115	1.090
C12	H121	1.115	1.090
C12	H122	1.115	1.090
C14	H14	1.103	1.080
C15	N16	1.326	1.347
C15	O17	1.246	1.216
N16	C18	1.387	1.402
N16	H16	1.020	0.971
C18	C19	1.356	1.404
C18	N20	1.371	1.313
C19	C21	1.410	1.353
C19	H19	1.103	1.078
N20	N22	1.344	1.401
C21	N22	1.369	1.349
C21	C23	1.511	1.505
N22	H22	1.020	0.970
C23	C24	1.544	1.544
C23	N25	1.436	1.485
C23	H23	1.115	1.090
C24	C26	1.569	1.542
C24	H241	1.115	1.090
C24	H242	1.115	1.089
N25	C27	1.501	1.486
N25	H25	1.020	1.009
C26	C27	1.562	1.544
C26	H261	1.115	1.089
C26	H262	1.115	1.091
C27	H271	1.115	1.090
C27	H272	1.115	1.090

Bond Angles for 2PU

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	C3	106.6	106.1
C2	C1	C4	133.7	133.8
C1	C2	N5	102.2	105.3
C1	C2	C6	125.3	111.5
C1	C2	H2	101.7	112.7
C3	C1	C4	119.7	120.1
C1	C3	C7	110.1	108.0
C1	C3	C8	121.1	119.5
C1	C4	C9	118.5	119.9
C1	C4	N10	124.4	120.0
N5	C2	C6	100.2	103.0
N5	C2	H2	126.3	112.0
C2	N5	C7	115.4	107.0
C2	N5	C11	114.6	105.4
C6	C2	H2	103.7	111.8
C2	C6	C12	103.1	102.5
C2	C6	H61	114.6	110.9
C2	C6	H62	114.6	110.8
C7	C3	C8	128.7	132.6
C3	C7	N5	105.7	109.4
C3	C7	O13	125.2	125.3
C3	C8	C14	118.4	120.0
C3	C8	H8	120.3	119.9
C9	C4	N10	117.1	120.0
C4	C9	C14	121.6	120.1
C4	C9	H9	119.8	120.0
C4	N10	C15	129.9	120.0
C4	N10	H10	105.1	120.0
C7	N5	C11	124.1	147.6
N5	C7	O13	129.1	125.3
N5	C11	C12	101.1	106.8
N5	C11	H111	115.4	110.0
N5	C11	H112	115.4	110.0
C12	C6	H61	114.7	110.9
C12	C6	H62	114.6	110.8
C6	C12	C11	104.6	104.9
C6	C12	H121	114.0	110.3
C6	C12	H122	114.1	110.4
H61	C6	H62	95.8	110.8
C14	C8	H8	121.2	120.0
C8	C14	C9	120.6	120.4
C8	C14	H14	120.4	119.8
C14	C9	H9	118.5	119.9
C9	C14	H14	119.0	119.8
C15	N10	H10	105.1	120.0
N10	C15	N16	116.1	120.0
N10	C15	O17	120.5	120.0
C12	C11	H111	115.4	110.0
C12	C11	H112	115.4	110.0
C11	C12	H121	114.0	110.3
C11	C12	H122	114.0	110.4
H111	C11	H112	95.0	110.1
H121	C12	H122	96.4	110.4
N16	C15	O17	123.4	120.0
C15	N16	C18	123.6	120.0
C15	N16	H16	115.8	120.1
C18	N16	H16	120.6	119.9
N16	C18	C19	125.9	126.0
N16	C18	N20	124.4	125.9
C19	C18	N20	109.7	108.1
C18	C19	C21	105.3	107.8
C18	C19	H19	125.9	126.0
C18	N20	N22	108.7	108.1
C21	C19	H19	128.8	126.1
C19	C21	N22	108.7	107.8
C19	C21	C23	126.6	126.1
N20	N22	C21	107.7	108.1
N20	N22	H22	125.5	126.0
N22	C21	C23	124.7	126.1
C21	N22	H22	126.9	125.9
C21	C23	C24	116.7	110.4
C21	C23	N25	121.8	110.5
C21	C23	H23	91.9	110.3
C24	C23	N25	104.4	104.7
C24	C23	H23	114.0	110.4
C23	C24	C26	102.6	105.1
C23	C24	H241	114.8	110.3
C23	C24	H242	114.9	110.4
N25	C23	H23	107.6	110.4
C23	N25	C27	105.3	104.3
C23	N25	H25	113.8	106.9
C26	C24	H241	114.8	110.3
C26	C24	H242	114.8	110.4
C24	C26	C27	104.5	105.1
C24	C26	H261	114.1	110.4
C24	C26	H262	114.1	110.3
H241	C24	H242	95.6	110.4
C27	N25	H25	113.8	106.7
N25	C27	C26	105.0	104.6
N25	C27	H271	113.9	110.6
N25	C27	H272	113.9	110.3
C27	C26	H261	114.1	110.3
C27	C26	H262	114.1	110.3
C26	C27	H271	113.9	110.4
C26	C27	H272	113.9	110.4
H261	C26	H262	96.4	110.3
H271	C27	H272	96.6	110.4

Torsion Angles for 2PU

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C3	C1	C2	C4	180.9	180.8
C2	C1	C3	C7	358.3	359.3
C2	C1	C3	C8	178.7	178.9
C2	C1	C4	C9	182.0	180.8
C2	C1	C4	N10	2.8	1.1
N5	C2	C1	C6	247.9	249.1
N5	C2	C1	H2	131.6	122.3
C1	C2	N5	C7	359.3	339.7
C1	C2	N5	C11	153.3	158.6
C6	C2	C1	H2	243.6	233.3
C1	C2	C6	C12	209.6	208.9
C1	C2	C6	H61	84.3	90.6
C1	C2	C6	H62	334.8	327.1
C2	C1	C3	C4	179.3	179.3
C3	C1	C2	N5	1.4	12.2
C3	C1	C2	C6	113.5	123.2
C3	C1	C2	H2	229.8	249.9
C3	C1	C4	C9	1.0	359.9
C3	C1	C4	N10	181.8	180.2
C7	C3	C1	C8	179.6	180.4
C1	C3	C7	N5	1.2	347.3
C1	C3	C7	O13	181.0	167.4
C1	C3	C8	C14	359.6	0.5
C1	C3	C8	H8	179.6	180.6
C2	C1	C4	C3	181.0	180.9
C4	C1	C2	N5	180.5	191.4
C4	C1	C2	C6	292.6	302.4
C4	C1	C2	H2	49.0	69.1
C4	C1	C3	C7	179.1	180.0
C4	C1	C3	C8	359.5	359.6
C9	C4	C1	N10	179.2	179.7
C1	C4	C9	C14	359.4	0.4
C1	C4	C9	H9	179.4	180.3
C1	C4	N10	C15	186.9	155.1
C1	C4	N10	H10	61.7	335.1
N5	C2	C1	C3	1.4	12.2
N5	C2	C1	C4	180.5	191.4
C1	C2	N5	C6	129.8	116.9
C1	C2	N5	H2	245.3	237.2
C6	C2	N5	H2	115.5	120.3
N5	C2	C6	C12	322.6	321.3
N5	C2	C6	H61	197.3	203.0
N5	C2	C6	H62	87.9	79.5
C3	C7	N5	C2	359.8	20.3
C7	N5	C2	C11	206.0	181.1
C2	N5	C7	O13	180.0	200.3
C2	N5	C11	C12	0.4	332.3
C2	N5	C11	H111	235.1	91.6
C2	N5	C11	H112	125.7	213.0
C6	C2	C1	C3	113.5	123.2
C6	C2	C1	C4	292.6	302.4
C1	C2	C6	N5	247.0	247.6
C1	C2	C6	H2	115.5	127.2
N5	C2	C6	H2	228.5	239.6
C6	C2	N5	C7	229.5	222.8
C6	C2	N5	C11	23.5	41.7
C12	C6	C2	H61	125.3	118.3
C12	C6	C2	H62	234.7	241.8
C2	C6	C12	C11	39.7	21.8
C2	C6	C12	H121	274.4	263.0
C2	C6	C12	H122	164.9	140.7
H61	C6	C2	H62	109.4	123.5
H2	C2	C1	C3	229.8	249.9
H2	C2	C1	C4	49.0	69.1
C1	C2	H2	N5	114.9	118.5
C1	C2	H2	C6	228.8	233.5
N5	C2	H2	C6	113.9	115.0
H2	C2	N5	C7	113.9	102.5
H2	C2	N5	C11	268.0	281.4
H2	C2	C6	C12	94.1	81.7
H2	C2	C6	H61	328.8	323.4
H2	C2	C6	H62	219.4	199.9
C7	C3	C1	C4	179.1	180.0
C1	C3	C7	C8	180.4	179.6
C2	N5	C7	C3	359.8	20.3
C7	C3	C8	C14	180.1	180.1
C7	C3	C8	H8	0.1	0.1
C3	C7	N5	C11	208.5	202.3
N5	C7	C3	O13	180.2	179.9
C8	C3	C1	C4	359.5	359.6
C1	C3	C8	C7	179.5	180.5
C8	C3	C7	N5	180.8	167.8
C8	C3	C7	O13	0.6	347.8
C14	C8	C3	H8	180.0	179.9
C3	C8	C14	C9	0.8	359.8
C3	C8	C14	H14	180.8	179.8
C1	C4	C9	N10	180.8	180.3
C9	C4	N10	C15	7.7	335.3
C9	C4	N10	H10	242.5	155.3
C8	C14	C9	C4	359.7	359.8
C14	C9	C4	H9	180.0	180.1
C4	C9	C14	H14	179.7	179.8
C1	C4	N10	C9	179.2	179.7
N10	C4	C9	C14	178.6	180.1
N10	C4	C9	H9	358.6	0.1
C15	N10	C4	H10	125.2	180.0
C4	N10	C15	N16	178.1	173.6
C4	N10	C15	O17	0.7	353.9
C7	N5	C2	C6	229.5	222.8
C7	N5	C2	H2	113.9	102.5
C2	N5	C7	C11	151.3	178.1
N5	C7	C3	C8	180.8	167.8
C3	C7	N5	O13	179.8	180.1
C7	N5	C11	C12	151.9	150.4
C7	N5	C11	H111	26.6	269.7
C7	N5	C11	H112	277.1	31.1
C11	N5	C2	C6	23.5	41.7
C11	N5	C2	H2	268.0	281.4
C2	N5	C11	C7	208.5	181.9
C11	N5	C7	O13	28.7	22.2
C6	C12	C11	N5	335.4	2.8
C12	C11	N5	H111	125.3	240.7
C12	C11	N5	H112	234.7	119.3
N5	C11	C12	H121	100.7	121.6
N5	C11	C12	H122	210.2	244.0
H111	C11	N5	H112	109.5	238.6
C12	C6	C2	H2	94.1	81.7
C2	C6	C12	H61	234.7	241.7
C2	C6	C12	H62	125.3	118.2
N5	C11	C12	C6	335.4	2.8
H61	C6	C12	H62	250.5	236.5
C6	C12	C11	H111	100.7	243.5
C6	C12	C11	H112	210.2	122.1
C11	C12	C6	H121	125.3	118.8
C11	C12	C6	H122	234.8	241.1
H121	C12	C6	H122	109.5	122.3
H61	C6	C2	H2	328.8	323.4
C2	C6	H61	C12	119.0	113.1
C2	C6	H61	H62	239.5	236.6
C12	C6	H61	H62	120.5	123.5
H61	C6	C12	C11	165.0	140.2
H61	C6	C12	H121	39.7	21.4
H61	C6	C12	H122	290.2	259.0
H62	C6	C2	H2	219.4	199.9
C2	C6	H62	C12	241.0	247.0
C2	C6	H62	H61	120.5	123.5
C12	C6	H62	H61	239.5	236.5
H62	C6	C12	C11	274.4	263.6
H62	C6	C12	H121	149.1	144.8
H62	C6	C12	H122	39.7	22.5
O13	C7	C3	C8	0.6	347.8
C3	C7	O13	N5	180.3	179.9
O13	C7	N5	C11	28.7	22.2
C3	C8	C14	H8	180.0	180.1
C4	C9	C14	C8	359.7	359.8
C8	C14	C9	H9	179.7	179.8
C9	C14	C8	H14	180.0	180.0
C3	C8	H8	C14	180.0	179.9
H8	C8	C14	C9	180.8	179.7
H8	C8	C14	H14	0.8	359.7
C14	C9	C4	N10	178.6	180.1
C4	C9	C14	H9	180.0	179.9
C9	C14	C8	H8	180.8	179.7
C8	C14	C9	H14	180.0	180.0
H9	C9	C4	N10	358.6	0.1
C4	C9	H9	C14	180.0	180.1
H9	C9	C14	H14	359.7	359.8
C4	N10	C15	H10	234.7	180.0
N16	C15	N10	O17	177.5	179.7
N10	C15	N16	C18	7.1	180.3
N10	C15	N16	H16	187.2	0.3
C4	N10	H10	C15	139.5	180.0
H10	N10	C15	N16	303.4	353.6
H10	N10	C15	O17	125.9	173.9
N5	C11	C12	H111	234.7	119.3
N5	C11	C12	H112	125.3	240.7
C11	C12	C6	H61	165.0	140.2
C11	C12	C6	H62	274.4	263.6
C6	C12	C11	H121	234.7	241.2
C6	C12	C11	H122	125.3	118.9
H111	C11	C12	H112	250.5	121.4
H121	C12	C11	H122	250.5	237.7
N5	C11	H111	C12	117.5	242.7
N5	C11	H111	H112	238.8	121.4
C12	C11	H111	H112	121.2	238.7
H111	C11	C12	H121	226.0	2.3
H111	C11	C12	H122	335.5	124.6
N5	C11	H112	C12	242.5	117.3
N5	C11	H112	H111	121.3	238.6
C12	C11	H112	H111	238.8	121.3
H112	C11	C12	H121	335.5	240.9
H112	C11	C12	H122	84.9	3.2
H121	C12	C6	H61	39.7	21.4
H121	C12	C6	H62	149.1	144.8
C6	C12	H121	C11	120.1	115.4
C6	C12	H121	H122	240.0	237.7
H121	C12	C11	H111	226.0	2.3
H121	C12	C11	H112	335.5	240.9
C11	C12	H121	H122	119.9	122.3
H122	C12	C6	H61	290.2	259.0
H122	C12	C6	H62	39.7	22.5
C6	C12	H122	C11	239.9	244.5
C6	C12	H122	H121	119.9	122.3
H122	C12	C11	H111	335.5	124.6
H122	C12	C11	H112	84.9	3.2
C11	C12	H122	H121	240.1	237.7
H14	C14	C8	H8	0.8	359.7
C8	C14	H14	C9	180.0	180.0
H14	C14	C9	H9	359.7	359.8
N16	C15	N10	H10	303.4	353.6
N10	C15	N16	O17	182.6	180.3
C18	N16	C15	H16	180.0	180.0
C15	N16	C18	C19	160.1	0.0
C15	N16	C18	N20	340.9	179.7
O17	C15	N10	H10	125.9	173.9
N10	C15	O17	N16	177.3	179.7
O17	C15	N16	C18	184.5	360.0
O17	C15	N16	H16	4.6	180.0
C18	N16	C15	O17	184.5	360.0
C15	N16	C18	H16	180.0	180.0
C19	C18	N16	N20	179.3	180.3
N16	C18	C19	C21	180.9	180.0
N16	C18	C19	H19	0.9	360.0
N16	C18	N20	N22	178.9	179.9
H16	N16	C15	O17	4.6	180.0
C15	N16	H16	C18	180.0	180.0
H16	N16	C18	C19	340.1	180.0
H16	N16	C18	N20	160.8	359.7
C19	C18	N16	H16	340.1	180.0
N16	C18	C19	N20	180.6	179.7
C19	C18	N20	N22	359.5	359.6
C21	C19	C18	H19	180.0	180.0
C18	C19	C21	N22	360.0	360.0
C18	C19	C21	C23	178.4	180.0
N20	C18	N16	H16	160.8	359.7
N16	C18	N20	C19	179.4	180.3
N20	C18	C19	C21	0.3	0.3
N20	C18	C19	H19	180.3	180.3
C18	N20	N22	C21	0.4	0.4
C18	N20	N22	H22	180.4	180.1
C21	C19	C18	N20	0.3	0.3
C18	C19	C21	H19	180.0	180.0
N20	N22	C21	C19	359.7	359.7
N22	C21	C19	C23	181.6	180.0
C19	C21	N22	H22	179.7	180.1
C19	C21	C23	C24	189.3	238.4
C19	C21	C23	N25	59.6	123.0
C19	C21	C23	H23	307.5	0.7
H19	C19	C18	N20	180.3	180.3
C18	C19	H19	C21	180.0	180.0
H19	C19	C21	N22	180.0	180.0
H19	C19	C21	C23	358.4	0.0
C19	C21	N22	N20	359.7	359.7
N20	N22	C21	C23	181.3	179.7
C21	N22	N20	H22	180.0	180.3
N22	C21	C19	H19	180.0	180.0
C19	C21	N22	C23	178.4	180.0
N20	N22	C21	H22	180.0	179.7
N22	C21	C23	C24	7.5	58.4
N22	C21	C23	N25	237.8	303.0
N22	C21	C23	H23	125.7	180.7
C23	C21	C19	H19	358.4	0.0
C19	C21	C23	N22	181.9	180.0
C23	C21	N22	H22	1.3	0.1
C24	C23	C21	N25	129.7	115.4
C24	C23	C21	H23	241.8	237.7
C21	C23	C24	C26	185.6	217.4
C21	C23	C24	H241	60.3	336.2
C21	C23	C24	H242	310.9	98.4
N25	C23	C21	H23	112.1	122.3
C21	C23	N25	C27	178.9	158.2
C21	C23	N25	H25	53.6	271.0
N20	N22	H22	C21	180.0	180.4
H22	N22	C21	C23	1.3	0.1
C21	C23	C24	N25	222.5	241.0
C21	C23	C24	H23	105.4	122.3
N25	C23	C24	H23	242.9	241.2
C24	C23	N25	C27	44.1	39.3
C24	C23	N25	H25	278.9	152.0
C26	C24	C23	H241	125.3	241.2
C26	C24	C23	H242	234.7	119.0
C23	C24	C26	C27	15.9	359.9
C23	C24	C26	H261	250.6	118.9
C23	C24	C26	H262	141.2	241.0
H241	C24	C23	H242	109.5	237.8
C21	C23	N25	C24	134.8	118.9
C21	C23	N25	H23	256.2	237.7
C24	C23	N25	H23	121.5	118.8
N25	C23	C24	C26	323.1	336.3
N25	C23	C24	H241	197.8	95.1
N25	C23	C24	H242	88.4	217.3
C27	N25	C23	H25	125.2	247.2
C23	N25	C27	C26	327.0	320.7
C23	N25	C27	H271	201.7	201.9
C23	N25	C27	H272	92.2	79.5
C21	C23	H23	C24	239.6	237.7
C21	C23	H23	N25	124.3	122.4
C24	C23	H23	N25	244.7	244.7
H23	C23	C24	C26	80.2	95.1
H23	C23	C24	H241	315.0	213.9
H23	C23	C24	H242	205.5	336.1
H23	C23	N25	C27	282.6	280.5
H23	C23	N25	H25	157.4	33.3
C26	C24	C23	N25	323.1	336.3
C26	C24	C23	H23	80.2	95.1
C23	C24	C26	H241	234.7	118.8
C23	C24	C26	H242	125.3	241.0
H241	C24	C26	H242	250.6	122.2
N25	C27	C26	C24	9.1	23.8
C27	C26	C24	H261	125.3	241.1
C27	C26	C24	H262	234.7	118.9
C24	C26	C27	H271	134.3	142.7
C24	C26	C27	H272	243.8	265.1
H261	C26	C24	H262	109.4	237.8
H241	C24	C23	N25	197.8	95.1
H241	C24	C23	H23	315.0	213.9
C23	C24	H241	C26	118.6	244.4
C23	C24	H241	H242	239.3	122.2
C26	C24	H241	H242	120.7	237.8
H241	C24	C26	C27	141.2	241.1
H241	C24	C26	H261	15.9	0.1
H241	C24	C26	H262	266.4	122.2
H242	C24	C23	N25	88.4	217.3
H242	C24	C23	H23	205.5	336.1
C23	C24	H242	C26	241.4	115.7
C23	C24	H242	H241	120.7	237.8
C26	C24	H242	H241	239.3	122.1
H242	C24	C26	C27	250.6	118.9
H242	C24	C26	H261	125.3	237.9
H242	C24	C26	H262	15.9	0.0
C27	N25	C23	H23	282.6	280.5
C23	N25	C27	H25	234.8	112.9
C24	C26	C27	N25	9.1	23.8
N25	C27	C26	H261	134.3	264.8
N25	C27	C26	H262	243.8	142.7
C26	C27	N25	H271	125.2	118.8
C26	C27	N25	H272	234.8	241.3
H271	C27	N25	H272	109.5	122.4
H25	N25	C23	H23	157.4	33.3
C23	N25	H25	C27	120.6	248.9
H25	N25	C27	C26	92.2	207.8
H25	N25	C27	H271	327.0	89.0
H25	N25	C27	H272	217.4	326.5
C27	C26	C24	H241	141.2	241.1
C27	C26	C24	H242	250.6	118.9
C24	C26	C27	H261	234.7	119.0
C24	C26	C27	H262	125.2	241.1
C26	C27	N25	H25	92.2	207.8
N25	C27	C26	H271	234.7	241.1
N25	C27	C26	H272	125.3	118.7
H261	C26	C27	H262	250.5	122.1
H271	C27	C26	H272	250.5	237.6
H261	C26	C24	H241	15.9	0.1
H261	C26	C24	H242	125.3	237.9
C24	C26	H261	C27	120.0	244.3
C24	C26	H261	H262	240.0	122.2
C27	C26	H261	H262	120.0	237.9
H261	C26	C27	H271	259.6	23.7
H261	C26	C27	H272	9.1	146.1
H262	C26	C24	H241	266.4	122.2
H262	C26	C24	H242	15.9	0.0
C24	C26	H262	C27	240.0	115.6
C24	C26	H262	H261	120.0	237.7
C27	C26	H262	H261	240.0	122.1
H262	C26	C27	H271	9.1	261.6
H262	C26	C27	H272	118.6	24.0
H271	C27	N25	H25	327.0	89.0
N25	C27	H271	C26	120.4	115.3
N25	C27	H271	H272	240.2	237.6
H271	C27	C26	H261	259.6	23.7
H271	C27	C26	H262	9.1	261.6
C26	C27	H271	H272	119.8	122.4
H272	C27	N25	H25	217.4	326.5
N25	C27	H272	C26	239.6	244.9
N25	C27	H272	H271	119.9	122.5
H272	C27	C26	H261	9.1	146.1
H272	C27	C26	H262	118.6	24.0
C26	C27	H272	H271	240.2	237.7