PDB Chemical Component 2PM

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 2PM

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.414	1.382
C1	C6	1.409	1.382
C1	H1	1.103	1.080
C2	C3	1.412	1.383
C2	H2	1.102	1.080
C3	C4	1.405	1.382
C3	H3	1.102	1.080
C4	C5	1.448	1.382
C4	H4	1.102	1.080
C5	C6	1.411	1.382
C5	C7	1.512	1.507
C6	H6	1.104	1.080
C7	C8	1.518	1.506
C7	O1	1.405	1.429
C7	H7	1.114	1.090
C8	C9	1.415	1.382
C8	C13	1.421	1.383
C9	C10	1.405	1.382
C9	H9	1.103	1.080
C10	C11	1.410	1.383
C10	H10	1.104	1.081
C11	C12	1.410	1.382
C11	H11	1.104	1.081
C12	C13	1.405	1.382
C12	H12	1.103	1.080
C13	H13	1.103	1.081
O1	C14	1.399	1.429
C14	C15	1.522	1.531
C14	H141	1.115	1.090
C14	H142	1.114	1.090
C15	N1	1.445	1.469
C15	H151	1.114	1.090
C15	H152	1.115	1.090
N1	C16	1.441	1.469
N1	C17	1.439	1.469
C16	H161	1.115	1.089
C16	H162	1.115	1.090
C16	H163	1.115	1.090
C17	H171	1.115	1.090
C17	H172	1.115	1.089
C17	H173	1.115	1.089

Bond Angles for 2PM

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	C6	120.2	120.0
C2	C1	H1	120.1	120.0
C1	C2	C3	120.3	120.0
C1	C2	H2	119.9	120.0
C6	C1	H1	119.7	120.0
C1	C6	C5	120.3	120.0
C1	C6	H6	119.8	120.0
C3	C2	H2	119.8	120.0
C2	C3	C4	120.0	120.0
C2	C3	H3	120.2	120.0
C4	C3	H3	119.8	120.0
C3	C4	C5	119.9	120.0
C3	C4	H4	118.6	120.0
C5	C4	H4	121.5	120.0
C4	C5	C6	119.2	120.0
C4	C5	C7	120.7	120.0
C6	C5	C7	120.1	120.0
C5	C6	H6	119.9	120.0
C5	C7	C8	111.7	109.5
C5	C7	O1	123.9	109.5
C5	C7	H7	98.1	109.4
C8	C7	O1	116.0	109.5
C8	C7	H7	111.7	109.5
C7	C8	C9	120.2	120.0
C7	C8	C13	120.6	120.0
O1	C7	H7	90.4	109.4
C7	O1	C14	117.8	106.8
C9	C8	C13	119.3	120.0
C8	C9	C10	120.3	120.0
C8	C9	H9	120.2	120.0
C8	C13	C12	120.2	120.0
C8	C13	H13	120.4	120.0
C10	C9	H9	119.5	120.0
C9	C10	C11	120.1	120.0
C9	C10	H10	119.8	120.0
C11	C10	H10	120.1	120.0
C10	C11	C12	120.1	120.0
C10	C11	H11	119.9	119.9
C12	C11	H11	120.0	120.0
C11	C12	C13	120.0	120.0
C11	C12	H12	120.1	120.0
C13	C12	H12	119.9	120.0
C12	C13	H13	119.3	120.0
O1	C14	C15	107.7	109.4
O1	C14	H141	112.8	109.5
O1	C14	H142	112.8	109.5
C15	C14	H141	112.9	109.4
C15	C14	H142	112.9	109.5
C14	C15	N1	122.6	109.5
C14	C15	H151	107.5	109.4
C14	C15	H152	107.5	109.5
H141	C14	H142	97.6	109.5
N1	C15	H151	107.5	109.5
N1	C15	H152	107.5	109.5
C15	N1	C16	119.1	106.7
C15	N1	C17	112.5	106.7
H151	C15	H152	102.3	109.5
C16	N1	C17	108.1	106.7
N1	C16	H161	119.0	109.5
N1	C16	H162	108.8	109.5
N1	C16	H163	108.8	109.5
N1	C17	H171	112.5	109.5
N1	C17	H172	111.1	109.5
N1	C17	H173	111.1	109.5
H161	C16	H162	108.7	109.5
H161	C16	H163	108.8	109.5
H162	C16	H163	101.3	109.4
H171	C17	H172	111.1	109.5
H171	C17	H173	111.0	109.4
H172	C17	H173	99.2	109.5

Torsion Angles for 2PM

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C6	C1	C2	H1	180.0	179.9
C2	C1	C6	C5	360.0	360.0
C2	C1	C6	H6	179.9	180.0
C3	C2	C1	H2	180.0	180.1
C1	C2	C3	C4	359.9	359.8
C1	C2	C3	H3	180.0	180.0
C2	C1	C6	H1	180.0	180.1
C6	C1	C2	C3	0.1	0.0
C6	C1	C2	H2	180.1	179.9
C4	C5	C6	C1	359.9	0.2
C1	C6	C5	C7	180.0	180.0
C5	C6	C1	H6	180.0	180.0
C2	C1	H1	C6	180.0	179.9
H1	C1	C2	C3	180.1	180.1
H1	C1	C2	H2	0.1	360.0
H1	C1	C6	C5	179.9	179.9
H1	C1	C6	H6	359.9	360.0
C3	C2	C1	C6	0.1	0.0
C3	C2	C1	H1	180.1	180.1
C1	C2	C3	H2	180.0	179.9
C4	C3	C2	H3	180.0	179.8
C2	C3	C4	C5	360.0	0.4
C2	C3	C4	H4	180.0	180.1
H2	C2	C1	C6	180.1	179.9
H2	C2	C1	H1	0.1	360.0
C1	C2	H2	C3	180.0	180.1
H2	C2	C3	C4	179.9	179.9
H2	C2	C3	H3	359.9	0.1
C4	C3	C2	H2	179.9	179.9
C2	C3	C4	H3	180.0	180.2
C5	C4	C3	H4	180.0	180.4
C3	C4	C5	C6	0.1	359.6
C3	C4	C5	C7	180.0	179.8
H3	C3	C2	H2	359.9	0.1
C2	C3	H3	C4	180.0	179.8
H3	C3	C4	C5	180.0	180.2
H3	C3	C4	H4	360.0	359.9
C1	C6	C5	C4	359.9	0.2
C5	C4	C3	H3	180.0	180.2
C3	C4	C5	H4	180.0	179.6
C6	C5	C4	C7	180.1	179.8
C4	C5	C6	H6	180.0	180.2
C4	C5	C7	C8	101.8	279.8
C4	C5	C7	O1	248.5	39.8
C4	C5	C7	H7	344.5	159.7
H4	C4	C3	H3	360.0	359.9
C3	C4	H4	C5	180.0	180.4
H4	C4	C5	C6	180.0	179.9
H4	C4	C5	C7	360.0	0.1
C5	C6	C1	H1	179.9	179.9
C1	C6	C5	H6	180.0	180.0
C6	C5	C4	H4	180.0	179.9
C4	C5	C6	C7	179.9	180.2
C6	C5	C7	C8	281.7	100.0
C6	C5	C7	O1	68.4	220.0
C6	C5	C7	H7	164.4	339.9
C7	C5	C4	H4	360.0	0.1
C4	C5	C7	C6	180.1	179.8
C7	C5	C6	H6	0.0	0.0
C8	C7	C5	O1	213.3	240.0
C8	C7	C5	H7	117.3	120.0
C5	C7	C8	C9	122.3	265.0
C5	C7	C8	C13	302.1	84.7
O1	C7	C5	H7	264.1	240.1
C5	C7	O1	C14	66.5	149.9
H6	C6	C1	H1	359.9	360.0
C1	C6	H6	C5	180.0	180.0
H6	C6	C5	C7	0.0	0.0
C5	C7	C8	O1	149.5	120.0
C5	C7	C8	H7	251.2	240.0
O1	C7	C8	H7	101.7	120.0
C8	C7	O1	C14	212.0	270.0
C9	C8	C7	C13	180.2	180.3
C7	C8	C9	C10	179.8	180.0
C7	C8	C9	H9	359.8	360.0
C7	C8	C13	C12	180.1	179.8
C7	C8	C13	H13	0.1	0.2
C5	C7	O1	C8	214.6	239.9
C5	C7	O1	H7	100.0	119.9
C8	C7	O1	H7	245.5	240.0
O1	C7	C8	C9	332.8	145.0
O1	C7	C8	C13	152.6	324.7
C7	O1	C14	C15	199.8	180.0
C7	O1	C14	H141	325.1	60.1
C7	O1	C14	H142	74.6	300.0
C5	C7	H7	C8	117.3	120.0
C5	C7	H7	O1	235.7	240.0
C8	C7	H7	O1	118.4	120.0
H7	C7	C8	C9	231.1	25.0
H7	C7	C8	C13	50.9	204.7
H7	C7	O1	C14	326.5	30.0
C9	C8	C7	O1	332.8	145.0
C9	C8	C7	H7	231.1	25.0
C7	C8	C9	C13	179.8	179.7
C9	C8	C13	C12	359.9	359.5
C9	C8	C13	H13	179.9	180.0
C10	C9	C8	H9	180.0	180.1
C8	C9	C10	C11	0.1	360.0
C8	C9	C10	H10	180.0	180.0
C13	C8	C7	O1	152.6	324.7
C13	C8	C7	H7	50.9	204.7
C7	C8	C13	C9	180.2	180.3
C13	C8	C9	C10	0.0	0.3
C13	C8	C9	H9	180.0	180.2
C11	C12	C13	C8	0.2	0.4
C8	C13	C12	H12	180.2	180.3
C12	C13	C8	H13	180.0	179.6
C10	C9	C8	C13	0.0	0.3
C8	C9	C10	H9	180.0	179.9
C11	C10	C9	H10	180.0	180.0
C9	C10	C11	C12	360.0	360.0
C9	C10	C11	H11	180.0	180.0
H9	C9	C8	C13	180.0	180.2
C8	C9	H9	C10	180.0	180.1
H9	C9	C10	C11	180.1	180.0
H9	C9	C10	H10	0.1	0.0
C11	C10	C9	H9	180.1	180.0
C9	C10	C11	H10	180.0	180.0
C12	C11	C10	H11	180.0	180.0
C10	C11	C12	C13	359.9	359.8
C10	C11	C12	H12	179.9	180.0
H10	C10	C9	H9	0.1	0.0
C9	C10	H10	C11	180.0	180.0
H10	C10	C11	C12	180.0	180.0
H10	C10	C11	H11	360.0	360.0
C8	C13	C12	C11	0.2	0.4
C12	C11	C10	H10	180.0	180.0
C10	C11	C12	H11	180.0	180.0
C13	C12	C11	H12	180.0	179.9
C11	C12	C13	H13	180.2	180.0
H11	C11	C10	H10	360.0	360.0
C10	C11	H11	C12	180.0	180.0
H11	C11	C12	C13	179.9	179.8
H11	C11	C12	H12	359.9	360.0
C8	C13	C12	H13	180.0	180.4
C13	C12	C11	H11	179.9	179.8
C11	C12	C13	H12	180.0	180.1
H12	C12	C11	H11	359.9	360.0
C11	C12	H12	C13	180.0	179.9
H12	C12	C13	H13	0.2	359.8
C8	C13	H13	C12	180.0	179.6
H13	C13	C12	H12	0.2	359.8
C14	O1	C7	H7	326.5	30.0
C15	C14	O1	H141	234.7	119.9
C15	C14	O1	H142	125.3	240.0
O1	C14	C15	N1	64.7	65.0
O1	C14	C15	H151	190.0	305.0
O1	C14	C15	H152	299.5	185.0
H141	C14	O1	H142	250.5	120.1
O1	C14	C15	H141	125.2	240.0
O1	C14	C15	H142	234.8	120.0
H141	C14	C15	H142	109.5	240.0
N1	C15	C14	H151	234.7	120.0
N1	C15	C14	H152	125.2	240.0
C14	C15	N1	C16	45.7	76.2
C14	C15	N1	C17	277.7	190.0
H151	C15	C14	H152	250.5	120.0
O1	C14	H141	C15	237.6	119.9
O1	C14	H141	H142	118.7	239.9
C15	C14	H141	H142	241.2	120.0
H141	C14	C15	N1	299.5	185.0
H141	C14	C15	H151	64.8	65.0
H141	C14	C15	H152	174.3	305.0
O1	C14	H142	C15	122.4	240.0
O1	C14	H142	H141	241.3	120.0
C15	C14	H142	H141	118.8	240.0
H142	C14	C15	N1	190.0	305.0
H142	C14	C15	H151	315.3	185.0
H142	C14	C15	H152	64.7	65.0
N1	C15	C14	H141	299.5	185.0
N1	C15	C14	H142	190.0	305.0
C14	C15	N1	H151	125.3	240.1
C14	C15	N1	H152	234.8	120.0
H151	C15	N1	H152	109.5	240.0
C16	N1	C15	C17	128.0	246.2
C15	N1	C16	H161	180.0	293.8
C15	N1	C16	H162	305.2	53.7
C15	N1	C16	H163	54.8	173.7
C15	N1	C17	H171	180.0	300.0
C15	N1	C17	H172	305.3	60.0
C15	N1	C17	H173	54.8	180.1
H151	C15	C14	H141	64.8	65.0
H151	C15	C14	H142	315.3	185.0
C14	C15	H151	N1	226.1	120.0
C14	C15	H151	H152	113.1	240.0
N1	C15	H151	H152	246.9	120.0
H151	C15	N1	C16	280.4	196.2
H151	C15	N1	C17	152.4	309.9
H152	C15	C14	H141	174.3	305.0
H152	C15	C14	H142	64.7	65.0
C14	C15	H152	N1	133.8	240.0
C14	C15	H152	H151	246.9	120.0
N1	C15	H152	H151	113.1	240.0
H152	C15	N1	C16	170.9	316.2
H152	C15	N1	C17	42.9	70.0
C16	N1	C15	H151	280.4	196.2
C16	N1	C15	H152	170.9	316.2
C15	N1	C16	C17	230.0	113.8
C16	N1	C17	H171	46.5	53.8
C16	N1	C17	H172	171.7	173.8
C16	N1	C17	H173	281.3	293.8
H161	C16	N1	H162	234.8	240.0
H161	C16	N1	H163	125.3	120.0
H162	C16	N1	H163	250.4	240.0
C17	N1	C15	H151	152.4	309.9
C17	N1	C15	H152	42.9	70.0
C15	N1	C17	C16	133.5	246.3
C17	N1	C16	H161	310.0	180.0
C17	N1	C16	H162	75.2	300.0
C17	N1	C16	H163	184.7	60.0
H171	C17	N1	H172	234.7	240.0
H171	C17	N1	H173	125.2	120.0
H172	C17	N1	H173	250.5	240.0
H161	C16	N1	C17	310.0	180.0
N1	C16	H161	H162	125.2	120.0
N1	C16	H161	H163	234.7	239.9
H162	C16	H161	H163	109.5	120.0
H162	C16	N1	C17	75.2	300.0
N1	C16	H162	H161	229.0	240.0
N1	C16	H162	H163	114.5	120.0
H161	C16	H162	H163	245.5	240.0
H163	C16	N1	C17	184.7	60.0
N1	C16	H163	H161	131.1	120.1
N1	C16	H163	H162	245.5	240.0
H161	C16	H163	H162	114.4	120.0
N1	C17	H171	H172	125.3	120.0
N1	C17	H171	H173	234.7	240.0
H172	C17	H171	H173	109.4	120.0
N1	C17	H172	H171	233.9	240.0
N1	C17	H172	H173	117.0	120.0
H171	C17	H172	H173	243.1	240.0
N1	C17	H173	H171	126.1	120.0
N1	C17	H173	H172	243.0	240.0
H171	C17	H173	H172	116.9	120.0