PDB Chemical Component 2PG
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 2PG
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.527 |
1.507 |
C1 |
O1 |
1.291 |
1.208 |
C1 |
O2 |
1.284 |
1.342 |
C2 |
C3 |
1.534 |
1.530 |
C2 |
O1P |
1.457 |
1.427 |
C2 |
H2 |
1.116 |
1.090 |
C3 |
O3 |
1.413 |
1.430 |
C3 |
H31 |
1.115 |
1.090 |
C3 |
H32 |
1.115 |
1.090 |
P |
O1P |
1.594 |
1.609 |
P |
O2P |
1.493 |
1.480 |
P |
O3P |
1.505 |
1.610 |
P |
O4P |
1.464 |
1.609 |
O2 |
HO2 |
0.950 |
0.967 |
O3 |
H3 |
0.949 |
0.967 |
O3P |
HOP3 |
0.951 |
0.967 |
O4P |
HOP4 |
0.951 |
0.967 |
Bond Angles for 2PG
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
O1 |
111.3 |
120.0 |
C2 |
C1 |
O2 |
120.4 |
120.0 |
C1 |
C2 |
C3 |
106.8 |
109.4 |
C1 |
C2 |
O1P |
109.4 |
109.5 |
C1 |
C2 |
H2 |
113.2 |
109.4 |
O1 |
C1 |
O2 |
128.3 |
120.0 |
C1 |
O2 |
HO2 |
120.3 |
120.0 |
C3 |
C2 |
O1P |
114.6 |
109.5 |
C3 |
C2 |
H2 |
107.8 |
109.5 |
C2 |
C3 |
O3 |
117.6 |
109.4 |
C2 |
C3 |
H31 |
109.2 |
109.5 |
C2 |
C3 |
H32 |
109.2 |
109.5 |
O1P |
C2 |
H2 |
105.1 |
109.5 |
C2 |
O1P |
P |
120.7 |
106.8 |
O3 |
C3 |
H31 |
109.3 |
109.5 |
O3 |
C3 |
H32 |
109.3 |
109.5 |
C3 |
O3 |
H3 |
117.6 |
106.7 |
H31 |
C3 |
H32 |
100.9 |
109.4 |
O1P |
P |
O2P |
105.4 |
109.4 |
O1P |
P |
O3P |
106.7 |
109.5 |
O1P |
P |
O4P |
110.1 |
109.5 |
O2P |
P |
O3P |
111.3 |
109.4 |
O2P |
P |
O4P |
111.0 |
109.5 |
O3P |
P |
O4P |
112.1 |
109.4 |
P |
O3P |
HOP3 |
106.7 |
106.8 |
P |
O4P |
HOP4 |
110.2 |
106.8 |
Torsion Angles for 2PG
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1 |
C1 |
C2 |
O2 |
180.0 |
180.0 |
C2 |
C1 |
O2 |
HO2 |
180.0 |
180.0 |
C3 |
C2 |
C1 |
O1P |
235.4 |
240.0 |
C3 |
C2 |
C1 |
H2 |
118.5 |
120.0 |
C1 |
C2 |
C3 |
O3 |
16.7 |
180.0 |
C1 |
C2 |
C3 |
H31 |
142.0 |
60.0 |
C1 |
C2 |
C3 |
H32 |
251.4 |
300.0 |
O1P |
C2 |
C1 |
H2 |
243.1 |
240.0 |
C1 |
C2 |
O1P |
P |
117.1 |
120.0 |
C2 |
C1 |
O1 |
O2 |
180.0 |
180.0 |
O1 |
C1 |
C2 |
C3 |
134.8 |
240.0 |
O1 |
C1 |
C2 |
O1P |
259.4 |
360.0 |
O1 |
C1 |
C2 |
H2 |
16.3 |
120.0 |
O1 |
C1 |
O2 |
HO2 |
0.1 |
0.0 |
C2 |
C1 |
O2 |
O1 |
180.0 |
180.0 |
O2 |
C1 |
C2 |
C3 |
314.9 |
60.0 |
O2 |
C1 |
C2 |
O1P |
79.5 |
179.9 |
O2 |
C1 |
C2 |
H2 |
196.3 |
300.0 |
C3 |
C2 |
C1 |
O1 |
134.8 |
240.0 |
C3 |
C2 |
C1 |
O2 |
314.9 |
60.0 |
C1 |
C2 |
C3 |
O1P |
121.4 |
120.0 |
C1 |
C2 |
C3 |
H2 |
238.0 |
240.0 |
O1P |
C2 |
C3 |
H2 |
116.7 |
120.0 |
C3 |
C2 |
O1P |
P |
237.0 |
239.9 |
O3 |
C3 |
C2 |
H31 |
234.7 |
120.0 |
O3 |
C3 |
C2 |
H32 |
125.3 |
240.0 |
C2 |
C3 |
O3 |
H3 |
180.0 |
180.0 |
H31 |
C3 |
C2 |
H32 |
250.6 |
120.0 |
O1P |
C2 |
C1 |
O1 |
259.4 |
360.0 |
O1P |
C2 |
C1 |
O2 |
79.5 |
179.9 |
C1 |
C2 |
O1P |
C3 |
240.1 |
240.0 |
C1 |
C2 |
O1P |
H2 |
121.9 |
120.0 |
C3 |
C2 |
O1P |
H2 |
241.8 |
240.0 |
O1P |
C2 |
C3 |
O3 |
255.3 |
60.0 |
O1P |
C2 |
C3 |
H31 |
20.6 |
300.0 |
O1P |
C2 |
C3 |
H32 |
130.0 |
180.0 |
C2 |
O1P |
P |
O2P |
273.5 |
60.1 |
C2 |
O1P |
P |
O3P |
31.9 |
180.0 |
C2 |
O1P |
P |
O4P |
153.8 |
300.0 |
H2 |
C2 |
C1 |
O1 |
16.3 |
120.0 |
H2 |
C2 |
C1 |
O2 |
196.3 |
300.0 |
C1 |
C2 |
H2 |
C3 |
117.9 |
119.9 |
C1 |
C2 |
H2 |
O1P |
240.6 |
239.9 |
C3 |
C2 |
H2 |
O1P |
122.7 |
120.0 |
H2 |
C2 |
C3 |
O3 |
138.7 |
300.0 |
H2 |
C2 |
C3 |
H31 |
264.0 |
180.0 |
H2 |
C2 |
C3 |
H32 |
13.4 |
60.0 |
H2 |
C2 |
O1P |
P |
355.2 |
360.0 |
O3 |
C3 |
C2 |
O1P |
255.3 |
60.0 |
O3 |
C3 |
C2 |
H2 |
138.7 |
300.0 |
C2 |
C3 |
O3 |
H31 |
125.2 |
240.0 |
C2 |
C3 |
O3 |
H32 |
234.8 |
120.1 |
H31 |
C3 |
O3 |
H32 |
109.5 |
240.0 |
H31 |
C3 |
C2 |
O1P |
20.6 |
300.0 |
H31 |
C3 |
C2 |
H2 |
264.0 |
180.0 |
C2 |
C3 |
H31 |
O3 |
230.0 |
120.0 |
C2 |
C3 |
H31 |
H32 |
114.9 |
239.9 |
O3 |
C3 |
H31 |
H32 |
244.9 |
120.0 |
H31 |
C3 |
O3 |
H3 |
54.8 |
300.0 |
H32 |
C3 |
C2 |
O1P |
130.0 |
180.0 |
H32 |
C3 |
C2 |
H2 |
13.4 |
60.0 |
C2 |
C3 |
H32 |
O3 |
130.0 |
240.0 |
C2 |
C3 |
H32 |
H31 |
245.0 |
120.0 |
O3 |
C3 |
H32 |
H31 |
115.1 |
240.0 |
H32 |
C3 |
O3 |
H3 |
305.3 |
59.9 |
P |
O1P |
C2 |
H2 |
355.2 |
360.0 |
O2P |
P |
O1P |
O3P |
241.6 |
240.0 |
O2P |
P |
O1P |
O4P |
119.8 |
120.0 |
O3P |
P |
O1P |
O4P |
238.1 |
240.0 |
O1P |
P |
O3P |
HOP3 |
180.0 |
180.1 |
O1P |
P |
O4P |
HOP4 |
180.0 |
300.0 |
O1P |
P |
O2P |
O3P |
115.2 |
120.0 |
O1P |
P |
O2P |
O4P |
240.8 |
240.0 |
O3P |
P |
O2P |
O4P |
125.6 |
120.0 |
O2P |
P |
O3P |
HOP3 |
294.4 |
300.0 |
O2P |
P |
O4P |
HOP4 |
63.7 |
180.1 |
O1P |
P |
O3P |
O2P |
245.6 |
240.0 |
O1P |
P |
O3P |
O4P |
120.6 |
120.1 |
O2P |
P |
O3P |
O4P |
235.1 |
240.0 |
O3P |
P |
O4P |
HOP4 |
298.6 |
60.1 |
O1P |
P |
O4P |
O2P |
116.3 |
120.0 |
O1P |
P |
O4P |
O3P |
241.4 |
239.9 |
O2P |
P |
O4P |
O3P |
125.1 |
120.0 |
O4P |
P |
O3P |
HOP3 |
59.4 |
60.0 |
H3 |
O3 |
C3 |
H31 |
54.8 |
300.0 |
H3 |
O3 |
C3 |
H32 |
305.3 |
59.9 |
HOP3 |
O3P |
P |
O4P |
59.4 |
60.0 |