PDB Chemical Component 2PC
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 2PC
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N1 |
C2 |
1.324 |
1.273 |
N1 |
C5 |
1.499 |
1.468 |
N1 |
HN1 |
1.020 |
0.971 |
C2 |
C3 |
1.491 |
1.512 |
C2 |
C6 |
1.515 |
1.483 |
C3 |
C4 |
1.544 |
1.550 |
C3 |
H31 |
1.115 |
1.091 |
C3 |
H32 |
1.114 |
1.090 |
C4 |
C5 |
1.542 |
1.547 |
C4 |
H41 |
1.116 |
1.091 |
C4 |
H42 |
1.115 |
1.090 |
C5 |
H51 |
1.115 |
1.091 |
C5 |
H52 |
1.116 |
1.089 |
C6 |
O7 |
1.228 |
1.223 |
C6 |
O8 |
1.229 |
1.222 |
Bond Angles for 2PC
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
N1 |
C5 |
113.3 |
112.6 |
C2 |
N1 |
HN1 |
118.0 |
123.7 |
N1 |
C2 |
C3 |
110.7 |
111.2 |
N1 |
C2 |
C6 |
122.2 |
124.4 |
C5 |
N1 |
HN1 |
128.7 |
123.7 |
N1 |
C5 |
C4 |
103.4 |
105.0 |
N1 |
C5 |
H51 |
114.5 |
110.3 |
N1 |
C5 |
H52 |
114.5 |
110.3 |
C3 |
C2 |
C6 |
127.1 |
124.4 |
C2 |
C3 |
C4 |
105.4 |
103.7 |
C2 |
C3 |
H31 |
113.8 |
110.9 |
C2 |
C3 |
H32 |
113.8 |
110.3 |
C2 |
C6 |
O7 |
111.8 |
120.0 |
C2 |
C6 |
O8 |
115.5 |
120.0 |
C4 |
C3 |
H31 |
113.7 |
110.5 |
C4 |
C3 |
H32 |
113.8 |
110.6 |
C3 |
C4 |
C5 |
105.8 |
100.7 |
C3 |
C4 |
H41 |
113.6 |
111.4 |
C3 |
C4 |
H42 |
113.6 |
111.0 |
H31 |
C3 |
H32 |
96.7 |
110.6 |
C5 |
C4 |
H41 |
113.6 |
111.1 |
C5 |
C4 |
H42 |
113.6 |
111.1 |
C4 |
C5 |
H51 |
114.5 |
110.4 |
C4 |
C5 |
H52 |
114.5 |
110.3 |
H41 |
C4 |
H42 |
96.9 |
111.1 |
H51 |
C5 |
H52 |
95.9 |
110.4 |
O7 |
C6 |
O8 |
132.7 |
120.0 |
Torsion Angles for 2PC
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C5 |
N1 |
C2 |
HN1 |
180.0 |
180.0 |
C2 |
N1 |
C5 |
C4 |
347.5 |
16.2 |
C2 |
N1 |
C5 |
H51 |
112.8 |
135.1 |
C2 |
N1 |
C5 |
H52 |
222.2 |
257.3 |
C3 |
C2 |
N1 |
C6 |
179.7 |
180.3 |
N1 |
C2 |
C3 |
C4 |
352.9 |
343.7 |
N1 |
C2 |
C3 |
H31 |
118.1 |
102.3 |
N1 |
C2 |
C3 |
H32 |
227.6 |
225.2 |
N1 |
C2 |
C6 |
O7 |
11.4 |
0.1 |
N1 |
C2 |
C6 |
O8 |
191.5 |
179.8 |
C2 |
N1 |
C5 |
HN1 |
180.0 |
180.0 |
C5 |
N1 |
C2 |
C3 |
12.7 |
0.2 |
C5 |
N1 |
C2 |
C6 |
193.0 |
179.8 |
C3 |
C4 |
C5 |
N1 |
7.2 |
335.8 |
N1 |
C5 |
C4 |
H41 |
241.9 |
93.9 |
N1 |
C5 |
C4 |
H42 |
132.5 |
218.1 |
C4 |
C5 |
N1 |
H51 |
234.7 |
241.1 |
C4 |
C5 |
N1 |
H52 |
125.3 |
118.9 |
H51 |
C5 |
N1 |
H52 |
250.6 |
237.8 |
C2 |
N1 |
HN1 |
C5 |
180.0 |
180.0 |
HN1 |
N1 |
C2 |
C3 |
192.7 |
180.2 |
HN1 |
N1 |
C2 |
C6 |
13.0 |
359.9 |
HN1 |
N1 |
C5 |
C4 |
167.5 |
196.2 |
HN1 |
N1 |
C5 |
H51 |
292.8 |
315.1 |
HN1 |
N1 |
C5 |
H52 |
42.2 |
77.3 |
C3 |
C2 |
N1 |
C5 |
12.7 |
0.2 |
C3 |
C2 |
N1 |
HN1 |
192.7 |
180.2 |
N1 |
C2 |
C3 |
C6 |
180.3 |
179.7 |
C3 |
C2 |
C6 |
O7 |
191.8 |
179.7 |
C3 |
C2 |
C6 |
O8 |
11.9 |
359.4 |
C4 |
C3 |
C2 |
H31 |
234.8 |
241.3 |
C4 |
C3 |
C2 |
H32 |
125.3 |
118.4 |
C2 |
C3 |
C4 |
C5 |
359.3 |
23.9 |
C2 |
C3 |
C4 |
H41 |
124.5 |
266.0 |
C2 |
C3 |
C4 |
H42 |
234.0 |
141.6 |
H31 |
C3 |
C2 |
H32 |
250.5 |
237.1 |
C6 |
C2 |
N1 |
C5 |
193.0 |
179.8 |
C6 |
C2 |
N1 |
HN1 |
13.0 |
359.9 |
N1 |
C2 |
C6 |
C3 |
179.6 |
180.4 |
C6 |
C2 |
C3 |
C4 |
172.6 |
164.0 |
C6 |
C2 |
C3 |
H31 |
297.8 |
282.6 |
C6 |
C2 |
C3 |
H32 |
47.3 |
45.6 |
O7 |
C6 |
C2 |
O8 |
179.9 |
180.3 |
N1 |
C5 |
C4 |
C3 |
7.2 |
335.8 |
C4 |
C3 |
C2 |
C6 |
172.6 |
164.0 |
C2 |
C3 |
C4 |
H31 |
125.2 |
118.9 |
C2 |
C3 |
C4 |
H32 |
234.7 |
241.7 |
H31 |
C3 |
C4 |
H32 |
109.5 |
122.8 |
C5 |
C4 |
C3 |
H41 |
234.8 |
117.9 |
C5 |
C4 |
C3 |
H42 |
125.2 |
242.3 |
C3 |
C4 |
C5 |
H51 |
241.9 |
216.9 |
C3 |
C4 |
C5 |
H52 |
132.5 |
94.7 |
H41 |
C4 |
C3 |
H42 |
250.5 |
124.3 |
H31 |
C3 |
C2 |
C6 |
297.8 |
282.6 |
C2 |
C3 |
H31 |
C4 |
239.4 |
245.5 |
C2 |
C3 |
H31 |
H32 |
119.7 |
122.7 |
C4 |
C3 |
H31 |
H32 |
240.3 |
237.2 |
H31 |
C3 |
C4 |
C5 |
234.0 |
265.0 |
H31 |
C3 |
C4 |
H41 |
359.3 |
147.0 |
H31 |
C3 |
C4 |
H42 |
108.8 |
22.7 |
H32 |
C3 |
C2 |
C6 |
47.3 |
45.6 |
C2 |
C3 |
H32 |
C4 |
120.7 |
114.2 |
C2 |
C3 |
H32 |
H31 |
240.3 |
236.9 |
C4 |
C3 |
H32 |
H31 |
119.6 |
122.8 |
H32 |
C3 |
C4 |
C5 |
124.5 |
142.2 |
H32 |
C3 |
C4 |
H41 |
249.8 |
24.2 |
H32 |
C3 |
C4 |
H42 |
359.3 |
259.9 |
C4 |
C5 |
N1 |
HN1 |
167.5 |
196.2 |
N1 |
C5 |
C4 |
H51 |
125.3 |
118.9 |
N1 |
C5 |
C4 |
H52 |
234.7 |
241.1 |
C5 |
C4 |
C3 |
H31 |
234.0 |
265.0 |
C5 |
C4 |
C3 |
H32 |
124.5 |
142.2 |
C3 |
C4 |
C5 |
H41 |
125.3 |
241.9 |
C3 |
C4 |
C5 |
H42 |
234.7 |
117.7 |
H41 |
C4 |
C5 |
H42 |
109.4 |
235.8 |
H51 |
C5 |
C4 |
H52 |
109.4 |
122.2 |
H41 |
C4 |
C3 |
H31 |
359.3 |
147.0 |
H41 |
C4 |
C3 |
H32 |
249.8 |
24.2 |
C3 |
C4 |
H41 |
C5 |
239.0 |
111.5 |
C3 |
C4 |
H41 |
H42 |
119.6 |
235.7 |
C5 |
C4 |
H41 |
H42 |
240.6 |
124.2 |
H41 |
C4 |
C5 |
H51 |
116.6 |
335.1 |
H41 |
C4 |
C5 |
H52 |
7.2 |
212.8 |
H42 |
C4 |
C3 |
H31 |
108.8 |
22.7 |
H42 |
C4 |
C3 |
H32 |
359.3 |
259.9 |
C3 |
C4 |
H42 |
C5 |
121.0 |
248.8 |
C3 |
C4 |
H42 |
H41 |
240.4 |
124.5 |
C5 |
C4 |
H42 |
H41 |
119.5 |
235.7 |
H42 |
C4 |
C5 |
H51 |
7.1 |
99.3 |
H42 |
C4 |
C5 |
H52 |
257.7 |
337.0 |
H51 |
C5 |
N1 |
HN1 |
292.8 |
315.1 |
N1 |
C5 |
H51 |
C4 |
240.8 |
244.4 |
N1 |
C5 |
H51 |
H52 |
120.4 |
122.2 |
H51 |
C5 |
C4 |
H41 |
116.6 |
335.1 |
H51 |
C5 |
C4 |
H42 |
7.1 |
99.3 |
C4 |
C5 |
H51 |
H52 |
239.6 |
237.8 |
H52 |
C5 |
N1 |
HN1 |
42.2 |
77.3 |
N1 |
C5 |
H52 |
C4 |
119.2 |
115.6 |
N1 |
C5 |
H52 |
H51 |
239.6 |
237.8 |
H52 |
C5 |
C4 |
H41 |
7.2 |
212.8 |
H52 |
C5 |
C4 |
H42 |
257.7 |
337.0 |
C4 |
C5 |
H52 |
H51 |
120.4 |
122.2 |
C2 |
C6 |
O7 |
O8 |
180.1 |
179.7 |
C2 |
C6 |
O8 |
O7 |
179.9 |
180.3 |