PDB Chemical Component 2OV

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 2OV

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
CE7 CZ5 1.395 1.383
CE7 CD7 1.394 1.383
CZ5 CE5 1.388 1.382
CD7 CB5 1.397 1.382
O44 PA4 1.495 1.480
CE5 CD5 1.391 1.382
O24 PA4 1.475 1.610
CB5 CD5 1.395 1.382
CB5 CA5 1.392 1.508
PA4 O34 1.463 1.609
PA4 O14 1.614 1.610
CA5 O15 1.426 1.429
O23 PA3 1.462 1.479
O14 C4 1.453 1.429
O15 C5 1.437 1.429
O43 PA3 1.475 1.610
PA3 O13 1.670 1.611
PA3 O33 1.460 1.610
C4 C5 1.528 1.530
C4 C3 1.507 1.530
C5 C6 1.541 1.530
O13 C3 1.481 1.429
O36 PA6 1.615 1.479
C3 C2 1.555 1.529
C6 O16 1.455 1.429
C6 C1 1.534 1.530
O16 PA6 1.631 1.611
PA6 O46 1.474 1.610
PA6 O26 1.480 1.610
C2 O12 1.451 1.429
C2 C1 1.540 1.530
O12 CA2 1.421 1.430
C1 O11 1.441 1.428
CD2 CE2 1.395 1.383
CD2 CB2 1.398 1.383
CE2 CZ 1.394 1.382
CA2 CB2 1.410 1.507
CB2 CD1 1.402 1.382
O11 PA1 1.604 1.610
CZ CE1 1.393 1.383
CD1 CE1 1.399 1.383
O21 PA1 1.484 1.480
PA1 O31 1.478 1.610
PA1 O41 1.475 1.610
CD5 H1 1.080 1.079
CE5 H2 1.079 1.080
CZ5 H3 1.080 1.080
CE7 H4 1.080 1.080
CD7 H5 1.080 1.080
CA5 H6 1.100 1.090
CA5 H7 1.100 1.091
C5 H8 1.100 1.090
C6 H9 1.100 1.090
O46 H10 0.950 0.968
O26 H11 0.950 0.967
C1 H12 1.100 1.090
O41 H13 0.950 0.967
O31 H14 0.950 0.967
C4 H15 1.100 1.090
O34 H16 0.950 0.967
O24 H17 0.950 0.967
C3 H18 1.101 1.090
O43 H19 0.950 0.967
O33 H20 0.950 0.968
C2 H21 1.100 1.090
CA2 H22 1.100 1.089
CA2 H23 1.100 1.090
CD2 H24 1.080 1.079
CE2 H25 1.080 1.080
CZ H26 1.080 1.080
CE1 H27 1.080 1.079
CD1 H28 1.080 1.080

Bond Angles for 2OV

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
CE7 CZ5 H3 119.6 120.0
CE7 CD7 CB5 120.0 120.0
CD7 CE7 H4 120.3 120.0
CE7 CD7 H5 120.0 120.0
CZ5 CE5 H2 120.2 120.0
CD7 CB5 CA5 120.6 120.0
CB5 CD7 H5 120.0 120.0
O44 PA4 O34 116.7 109.5
CE5 CD5 H1 120.0 120.0
CB5 CD5 H1 120.0 120.0
CB5 CA5 O15 108.4 109.4
CB5 CA5 H6 109.7 109.5
CB5 CA5 H7 109.7 109.4
PA4 O34 H16 109.5 114.0
CA5 O15 C5 112.8 114.0
O15 CA5 H6 109.7 109.5
O15 CA5 H7 109.7 109.5
O14 C4 C3 107.6 109.5
O14 C4 H15 110.7 109.5
O15 C5 C6 108.5 109.5
O15 C5 H8 110.1 109.4
O43 PA3 O33 116.8 109.5
PA3 O33 H20 109.5 114.0
C4 C5 H8 108.8 109.5
C4 C3 C2 108.0 109.5
C3 C4 H15 109.8 109.5
C4 C3 H18 107.9 109.5
C5 C6 O16 108.9 109.4
C5 C6 C1 112.8 109.5
C6 C5 H8 108.6 109.5
C5 C6 H9 108.6 109.4
O13 C3 C2 116.8 109.5
O13 C3 H18 108.3 109.5
O36 PA6 O46 108.5 109.5
O36 PA6 O26 107.6 109.5
C3 C2 O12 112.9 109.5
C2 C3 H18 107.4 109.5
C3 C2 H21 108.9 109.5
O16 C6 C1 108.0 109.4
C6 O16 PA6 124.1 123.0
O16 C6 H9 109.8 109.5
C6 C1 O11 106.5 109.5
C1 C6 H9 108.7 109.5
C6 C1 H12 108.8 109.5
O16 PA6 O46 109.2 109.5
O16 PA6 O26 107.9 109.4
O46 PA6 O26 118.8 109.5
PA6 O46 H10 109.5 114.0
PA6 O26 H11 109.5 113.9
C2 O12 CA2 112.2 114.0
O12 C2 H21 110.3 109.5
C2 C1 H12 108.7 109.4
O12 CA2 CB2 106.4 109.4
O12 CA2 H22 110.3 109.4
O12 CA2 H23 110.2 109.4
C1 O11 PA1 123.7 123.0
O11 C1 H12 110.1 109.5
CD2 CE2 CZ 120.3 120.0
CE2 CD2 H24 119.7 120.0
CD2 CE2 H25 119.9 119.9
CD2 CB2 CD1 119.0 120.0
CE2 CZ CE1 119.7 120.0
CZ CE2 H25 119.9 120.0
CE2 CZ H26 120.1 120.0
CA2 CB2 CD1 121.7 120.0
CB2 CA2 H22 110.2 109.5
CB2 CA2 H23 110.2 109.5
CB2 CD1 CE1 120.4 120.0
CB2 CD1 H28 119.8 120.0
O11 PA1 O31 103.0 109.5
O11 PA1 O41 102.8 109.5
CE1 CZ H26 120.2 120.0
CZ CE1 H27 119.9 120.0
CD1 CE1 H27 119.9 120.0
O41 PA1 O31 116.6 109.5
PA1 O31 H14 109.5 114.0
PA1 O41 H13 109.5 114.0
H6 CA5 H7 109.5 109.5
H22 CA2 H23 109.5 109.5

Torsion Angles for 2OV

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
CE7 CZ5 CE5 H2 179.1 180.1
CD7 CE7 CZ5 H3 180.4 180.0
CE7 CD7 CB5 CA5 180.3 180.0
CB5 CD7 CE7 H5 180.0 179.8
CZ5 CE5 CD5 H1 180.1 180.0
CB5 CD7 CE7 H4 180.8 179.8
CE7 CD7 CB5 H5 180.0 180.2
CD7 CB5 CD5 H1 181.1 179.7
CD7 CB5 CA5 O15 109.5 90.0
CD7 CB5 CA5 H6 229.3 210.0
CD7 CB5 CA5 H7 349.7 330.0
O44 PA4 O34 H16 0.0 180.1
CB5 CD5 CE5 H1 180.0 180.3
O24 PA4 O34 H16 137.4 300.1
CE5 CD5 CB5 H1 180.0 179.7
CA5 CB5 CD7 H5 0.3 359.8
CA5 CB5 CD5 H1 359.3 0.3
CB5 CA5 O15 C5 183.4 180.0
O15 CA5 CB5 H6 240.2 240.0
O15 CA5 CB5 H7 119.8 120.0
H6 CA5 CB5 H7 239.6 240.0
PA4 O14 C4 C3 242.4 240.0
PA4 O14 C4 H15 2.4 0.1
CB5 CA5 O15 H6 119.8 120.0
CB5 CA5 O15 H7 240.2 240.0
CA5 O15 C5 C6 248.9 210.0
CA5 O15 C5 H8 7.6 330.0
H6 CA5 O15 H7 120.3 120.0
O23 PA3 O33 H20 360.0 180.0
O14 C4 C5 H8 53.2 60.0
O14 C4 C3 C2 175.0 180.0
C3 C4 O14 H15 240.0 239.9
O14 C4 C3 H18 290.8 300.1
C5 O15 CA5 H6 63.5 60.0
C5 O15 CA5 H7 303.2 300.0
C4 C5 O15 H8 118.7 120.0
O15 C5 C6 O16 72.3 60.0
O15 C5 C6 C1 192.1 180.0
C6 C5 O15 H8 241.3 240.0
O15 C5 C6 H9 312.7 300.0
O43 PA3 O33 H20 234.4 59.9
PA3 O13 C3 C2 143.1 120.0
PA3 O13 C3 H18 21.9 0.0
O15 C5 C4 H8 240.5 240.0
C6 C5 C4 H8 120.5 120.0
C4 C5 C6 H9 72.4 60.1
O14 C4 C3 H15 120.5 120.1
C3 C4 C5 H8 295.4 300.0
O13 C3 C4 C2 232.7 240.0
O13 C3 C4 H18 116.9 120.0
C4 C3 C2 O12 308.2 300.0
C2 C3 C4 H18 244.2 240.0
C4 C3 C2 H21 185.2 180.0
O15 C5 C6 H8 119.6 120.0
C4 C5 C6 H8 239.4 240.0
O16 C6 C5 C1 240.1 240.0
C5 C6 O16 PA6 233.8 240.0
O16 C6 C5 H9 119.5 120.0
C5 C6 C1 O11 171.5 180.0
C1 C6 C5 H9 239.4 239.9
C5 C6 C1 H12 290.2 300.0
C4 C3 O13 C2 122.1 120.0
O13 C3 C4 H15 287.2 300.0
C4 C3 O13 H18 243.3 240.0
O13 C3 C2 O12 70.3 60.0
C2 C3 O13 H18 121.2 120.0
O13 C3 C2 H21 307.4 300.0
O16 PA6 O36 O46 244.0 120.0
O16 PA6 O36 O26 114.2 240.0
O46 PA6 O36 O26 230.3 120.0
O36 PA6 O46 H10 360.0 180.0
O36 PA6 O26 H11 360.0 60.0
C2 C3 C4 H15 54.5 60.0
C4 C3 C2 H18 116.2 120.0
O13 C3 C2 H18 238.3 240.0
C3 C2 O12 CA2 208.4 210.0
O12 C2 C3 H21 122.9 120.0
C3 C2 C1 H12 61.1 60.0
C5 C6 O16 C1 122.8 120.0
O16 C6 C5 H8 312.6 300.0
C5 C6 O16 H9 241.2 240.0
O16 C6 C1 O11 291.9 300.0
C1 C6 O16 H9 118.4 120.0
O16 C6 C1 H12 50.6 60.0
C6 O16 PA6 O46 2.5 65.0
C6 O16 PA6 O26 232.1 185.0
C5 C6 C1 O16 239.6 240.0
C1 C6 C5 H8 72.5 60.0
C5 C6 C1 H9 120.6 120.0
C1 C6 O16 PA6 111.0 120.0
O16 C6 C1 H9 241.0 240.0
C2 C1 C6 H12 119.6 119.9
C6 C1 O11 PA1 131.4 120.0
O11 C1 C6 H12 241.3 240.0
O36 PA6 O16 O46 115.6 240.0
O36 PA6 O16 O26 246.0 120.0
PA6 O16 C6 C1 111.0 120.0
PA6 O16 C6 H9 352.6 360.0
O46 PA6 O16 O26 130.4 240.0
O16 PA6 O46 H10 112.5 60.0
O16 PA6 O26 H11 248.5 180.0
O36 PA6 O46 O26 123.2 240.0
O16 PA6 O46 O26 235.8 120.0
O46 PA6 O26 H11 123.7 300.0
O36 PA6 O26 O46 236.3 120.0
O16 PA6 O26 O46 124.8 240.0
O26 PA6 O46 H10 236.8 300.0
O12 C2 C3 H18 192.0 180.0
C3 C2 O12 H21 237.9 240.0
O12 C2 C1 H12 183.2 180.0
C2 O12 CA2 CB2 209.7 180.0
C2 O12 CA2 H22 329.2 300.0
C2 O12 CA2 H23 90.1 60.1
C2 C1 C6 H9 289.2 300.0
C6 C1 C2 H12 240.3 240.0
O11 C1 C2 H12 121.6 120.0
CA2 O12 C2 H21 330.6 330.0
O12 CA2 CB2 CD1 87.2 90.1
CB2 CA2 O12 H22 240.5 240.0
CB2 CA2 O12 H23 119.5 119.9
H22 CA2 O12 H23 239.0 240.0
O11 C1 C6 H9 50.9 60.0
C6 C1 O11 H12 117.8 120.0
C2 C1 O11 H12 239.1 240.0
C1 O11 PA1 O31 50.1 295.0
C1 O11 PA1 O41 171.7 175.0
CE2 CD2 CB2 CD1 359.5 0.2
CD2 CE2 CZ CE1 0.1 0.0
CZ CE2 CD2 H25 180.0 180.0
CD2 CE2 CZ H26 180.1 180.0
CA2 CB2 CD2 CD1 180.9 179.8
CD2 CB2 CA2 H22 146.8 150.3
CD2 CB2 CA2 H23 25.9 30.2
CD2 CB2 CD1 CE1 0.3 359.5
CD2 CB2 CD1 H28 180.3 179.7
CZ CE2 CD2 H24 180.2 180.0
CD2 CE2 CZ H25 180.0 180.0
CE1 CZ CE2 H26 180.0 180.0
CE2 CZ CE1 H27 179.7 180.0
O12 CA2 CB2 H22 119.5 120.0
O12 CA2 CB2 H23 240.5 240.1
CD2 CB2 CA2 CD1 179.1 180.2
CA2 CB2 CD1 CE1 179.4 179.7
CA2 CB2 CD1 H28 359.4 359.9
H22 CA2 CB2 H23 120.9 120.1
CD1 CB2 CA2 H22 327.7 330.1
CD1 CB2 CA2 H23 206.7 210.0
CB2 CD1 CE1 H27 180.1 180.2
PA1 O11 C1 H12 13.5 360.0
O41 PA1 O11 O31 121.6 240.0
O11 PA1 O31 H14 250.2 299.9
O11 PA1 O41 H13 109.5 180.0
CE1 CZ CE2 H25 180.2 180.0
CE2 CZ CE1 H26 180.0 180.0
CB2 CD1 CE1 CZ 0.1 0.5
CD1 CE1 CZ H27 180.0 179.8
CB2 CD1 CE1 H28 180.0 180.2
CD1 CE1 CZ H26 179.7 179.8
CZ CE1 CD1 H27 180.0 180.2
O21 PA1 O31 H14 0.0 179.9
O21 PA1 O41 H13 360.0 300.0
O11 PA1 O31 O41 111.7 240.0
O31 PA1 O41 H13 221.3 60.0
O11 PA1 O41 O31 248.2 120.0
O41 PA1 O31 H14 138.5 60.0
H2 CE5 CD5 H1 0.1 359.9
H3 CZ5 CE5 H2 359.1 0.0
H4 CE7 CZ5 H3 0.4 0.0
H4 CE7 CD7 CB5 180.8 179.8
H4 CE7 CD7 H5 0.8 359.9
CE7 CD7 H5 CB5 180.0 179.8
H5 CD7 CE7 H4 0.8 359.9
H5 CD7 CB5 CA5 0.3 359.8
CB5 CA5 H6 O15 241.0 240.0
CB5 CA5 H6 H7 120.5 120.0
H6 CA5 O15 C5 63.5 60.0
O15 CA5 H6 H7 239.5 240.0
CB5 CA5 H7 O15 119.0 120.0
CB5 CA5 H7 H6 239.5 240.0
H7 CA5 O15 C5 303.2 300.0
O15 CA5 H7 H6 120.5 120.1
O15 C5 H8 C6 241.3 240.0
H8 C5 C6 O16 312.6 300.0
H8 C5 C6 C1 72.5 60.0
H8 C5 C6 H9 193.1 180.0
C5 C6 H9 O16 119.0 120.0
C5 C6 H9 C1 236.9 240.0
H9 C6 C5 H8 193.1 180.0
O16 C6 H9 C1 117.9 120.0
H9 C6 O16 PA6 352.6 360.0
H9 C6 C1 O11 50.9 60.0
H9 C6 C1 H12 169.6 180.0
H10 O46 PA6 O26 236.8 300.0
C6 C1 H12 O11 243.6 240.0
H12 C1 C6 H9 169.6 180.0
H12 C1 O11 PA1 13.5 360.0
H13 O41 PA1 O31 221.3 60.0
O14 C4 H15 C3 241.3 239.9
H15 C4 C5 H8 175.3 179.9
H15 C4 C3 C2 54.5 60.0
H15 C4 C3 H18 170.3 180.0
C4 C3 H18 C2 243.8 240.0
H18 C3 C4 H15 170.3 180.0
O13 C3 H18 C2 126.9 120.0
H18 C3 C2 O12 192.0 180.0
H18 C3 C2 H21 69.1 60.0
H19 O43 PA3 O33 129.2 60.0
C3 C2 H21 O12 124.5 120.0
H21 C2 C3 H18 69.1 60.0
H21 C2 O12 CA2 330.6 330.0
H21 C2 C1 H12 303.1 299.9
O12 CA2 H22 CB2 242.8 240.0
O12 CA2 H22 H23 121.4 119.9
H22 CA2 CB2 CD1 327.7 330.1
CB2 CA2 H22 H23 238.6 239.9
O12 CA2 H23 CB2 117.2 119.9
O12 CA2 H23 H22 238.6 240.0
H23 CA2 CB2 CD1 206.7 210.0
CB2 CA2 H23 H22 121.4 120.1
H24 CD2 CE2 CZ 180.2 180.0
H24 CD2 CE2 H25 0.2 360.0
H24 CD2 CB2 CD1 179.6 180.2
CD2 CE2 H25 CZ 180.0 180.0
H25 CE2 CD2 H24 0.2 360.0
H25 CE2 CZ CE1 180.2 180.0
H25 CE2 CZ H26 0.1 360.0
CE2 CZ H26 CE1 180.0 180.0
H26 CZ CE2 H25 0.1 360.0
H26 CZ CE1 H27 359.7 0.0
H27 CE1 CZ H26 359.7 0.0
CB2 CD1 H28 CE1 180.0 179.8
H28 CD1 CE1 H27 0.1 0.0