PDB Chemical Component 2OH
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 2OH
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O2 |
C13 |
1.339 |
1.361 |
O2 |
HO2 |
0.950 |
0.971 |
C13 |
C12 |
1.392 |
1.395 |
C13 |
C14 |
1.397 |
1.395 |
C12 |
C11 |
1.398 |
1.395 |
C12 |
H12 |
1.080 |
1.086 |
C11 |
C4 |
1.404 |
1.395 |
C11 |
H11 |
1.080 |
1.087 |
C14 |
C15 |
1.401 |
1.395 |
C14 |
H14 |
1.080 |
1.086 |
C15 |
C4 |
1.403 |
1.394 |
C15 |
H15 |
1.080 |
1.087 |
C4 |
C2 |
1.521 |
1.492 |
C2 |
C1 |
1.516 |
1.580 |
C2 |
C3 |
1.530 |
1.580 |
C2 |
C5 |
1.525 |
1.573 |
C3 |
H31 |
1.100 |
1.096 |
C3 |
H32 |
1.100 |
1.096 |
C3 |
H33 |
1.099 |
1.097 |
C5 |
H51 |
1.100 |
1.097 |
C5 |
H52 |
1.100 |
1.097 |
C5 |
H53 |
1.100 |
1.097 |
C1 |
C10 |
1.391 |
1.354 |
C1 |
C6 |
1.396 |
1.352 |
C10 |
C9 |
1.383 |
1.396 |
C10 |
H10 |
1.080 |
1.086 |
C9 |
C8 |
1.383 |
1.395 |
C9 |
H9 |
1.080 |
1.086 |
C6 |
C7 |
1.403 |
1.396 |
C6 |
H6 |
1.080 |
1.087 |
C7 |
C8 |
1.380 |
1.394 |
C7 |
H7 |
1.080 |
1.087 |
C8 |
O1 |
1.347 |
1.362 |
O1 |
HO1 |
0.950 |
0.970 |
Bond Angles for 2OH
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C13 |
O2 |
HO2 |
109.5 |
110.3 |
O2 |
C13 |
C12 |
119.7 |
120.0 |
O2 |
C13 |
C14 |
121.8 |
120.0 |
C12 |
C13 |
C14 |
118.6 |
120.0 |
C13 |
C12 |
C11 |
119.7 |
120.0 |
C13 |
C12 |
H12 |
120.2 |
120.4 |
C13 |
C14 |
C15 |
121.5 |
120.0 |
C13 |
C14 |
H14 |
119.3 |
120.4 |
C11 |
C12 |
H12 |
120.1 |
119.7 |
C12 |
C11 |
C4 |
122.7 |
120.0 |
C12 |
C11 |
H11 |
118.7 |
119.5 |
C4 |
C11 |
H11 |
118.7 |
120.5 |
C11 |
C4 |
C15 |
116.9 |
120.0 |
C11 |
C4 |
C2 |
120.9 |
120.0 |
C15 |
C14 |
H14 |
119.2 |
119.7 |
C14 |
C15 |
C4 |
120.6 |
120.0 |
C14 |
C15 |
H15 |
119.7 |
119.5 |
C4 |
C15 |
H15 |
119.7 |
120.5 |
C15 |
C4 |
C2 |
122.1 |
120.0 |
C4 |
C2 |
C1 |
110.1 |
112.5 |
C4 |
C2 |
C3 |
113.4 |
115.4 |
C4 |
C2 |
C5 |
105.8 |
109.4 |
C3 |
C2 |
C1 |
108.9 |
104.7 |
C5 |
C2 |
C1 |
113.0 |
110.9 |
C2 |
C1 |
C10 |
118.5 |
116.7 |
C2 |
C1 |
C6 |
123.3 |
116.8 |
C3 |
C2 |
C5 |
105.6 |
103.4 |
C2 |
C3 |
H31 |
109.5 |
110.7 |
C2 |
C3 |
H32 |
109.5 |
111.2 |
C2 |
C3 |
H33 |
109.4 |
113.1 |
C2 |
C5 |
H51 |
109.5 |
109.7 |
C2 |
C5 |
H52 |
109.5 |
113.9 |
C2 |
C5 |
H53 |
109.4 |
111.3 |
H31 |
C3 |
H32 |
109.4 |
107.6 |
H31 |
C3 |
H33 |
109.5 |
107.1 |
H32 |
C3 |
H33 |
109.5 |
106.9 |
H51 |
C5 |
H52 |
109.5 |
107.1 |
H51 |
C5 |
H53 |
109.5 |
106.9 |
H52 |
C5 |
H53 |
109.5 |
107.6 |
C10 |
C1 |
C6 |
118.2 |
126.5 |
C1 |
C10 |
C9 |
121.4 |
116.7 |
C1 |
C10 |
H10 |
119.3 |
123.8 |
C1 |
C6 |
C7 |
119.8 |
116.8 |
C1 |
C6 |
H6 |
120.1 |
123.8 |
C9 |
C10 |
H10 |
119.3 |
119.5 |
C10 |
C9 |
C8 |
120.6 |
120.0 |
C10 |
C9 |
H9 |
119.7 |
119.6 |
C8 |
C9 |
H9 |
119.7 |
120.4 |
C9 |
C8 |
C7 |
118.8 |
120.1 |
C9 |
C8 |
O1 |
119.7 |
120.0 |
C7 |
C6 |
H6 |
120.1 |
119.5 |
C6 |
C7 |
C8 |
121.1 |
120.0 |
C6 |
C7 |
H7 |
119.4 |
119.7 |
C8 |
C7 |
H7 |
119.4 |
120.4 |
C7 |
C8 |
O1 |
121.4 |
120.0 |
C8 |
O1 |
HO1 |
109.5 |
110.3 |
Torsion Angles for 2OH
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C12 |
C13 |
O2 |
C14 |
180.5 |
180.0 |
O2 |
C13 |
C12 |
C11 |
181.4 |
179.9 |
O2 |
C13 |
C12 |
H12 |
1.4 |
359.9 |
O2 |
C13 |
C14 |
C15 |
179.2 |
180.1 |
O2 |
C13 |
C14 |
H14 |
359.2 |
360.0 |
HO2 |
O2 |
C13 |
C12 |
309.0 |
347.8 |
HO2 |
O2 |
C13 |
C14 |
128.4 |
167.7 |
C12 |
C13 |
O2 |
HO2 |
309.0 |
347.8 |
O2 |
C13 |
C12 |
C14 |
179.5 |
180.0 |
C12 |
C13 |
C14 |
C15 |
358.7 |
0.0 |
C12 |
C13 |
C14 |
H14 |
178.7 |
179.9 |
C11 |
C12 |
C13 |
H12 |
180.0 |
180.0 |
C13 |
C12 |
C11 |
C4 |
358.0 |
360.0 |
C13 |
C12 |
C11 |
H11 |
178.0 |
180.0 |
C14 |
C13 |
O2 |
HO2 |
128.4 |
167.7 |
O2 |
C13 |
C14 |
C12 |
180.5 |
180.0 |
C14 |
C13 |
C12 |
C11 |
1.9 |
360.0 |
C14 |
C13 |
C12 |
H12 |
181.9 |
180.0 |
C15 |
C14 |
C13 |
H14 |
180.0 |
180.1 |
C13 |
C14 |
C15 |
C4 |
0.7 |
360.0 |
C13 |
C14 |
C15 |
H15 |
180.7 |
180.0 |
C11 |
C12 |
C13 |
C14 |
1.9 |
360.0 |
C13 |
C12 |
C11 |
H12 |
180.0 |
180.0 |
C4 |
C11 |
C12 |
H11 |
180.0 |
180.0 |
C12 |
C11 |
C4 |
C15 |
1.3 |
0.0 |
C12 |
C11 |
C4 |
C2 |
179.4 |
180.0 |
H12 |
C12 |
C13 |
C14 |
181.9 |
180.0 |
C13 |
C12 |
H12 |
C11 |
180.0 |
180.0 |
H12 |
C12 |
C11 |
C4 |
178.0 |
180.0 |
H12 |
C12 |
C11 |
H11 |
358.0 |
0.0 |
C4 |
C11 |
C12 |
H12 |
178.0 |
180.0 |
C12 |
C11 |
C4 |
H11 |
180.0 |
180.0 |
C14 |
C15 |
C4 |
C11 |
359.4 |
360.0 |
C11 |
C4 |
C15 |
H15 |
179.4 |
180.0 |
C15 |
C4 |
C11 |
C2 |
181.8 |
180.0 |
C11 |
C4 |
C2 |
C1 |
46.6 |
300.0 |
C11 |
C4 |
C2 |
C3 |
169.0 |
179.9 |
C11 |
C4 |
C2 |
C5 |
284.2 |
63.8 |
H11 |
C11 |
C12 |
H12 |
358.0 |
0.0 |
C12 |
C11 |
H11 |
C4 |
180.0 |
180.0 |
H11 |
C11 |
C4 |
C15 |
181.3 |
180.0 |
H11 |
C11 |
C4 |
C2 |
359.5 |
0.0 |
C13 |
C14 |
C15 |
H14 |
180.0 |
179.9 |
C11 |
C4 |
C15 |
C14 |
359.4 |
360.0 |
C4 |
C15 |
C14 |
H15 |
180.0 |
180.0 |
C14 |
C15 |
C4 |
C2 |
181.2 |
180.0 |
C13 |
C14 |
H14 |
C15 |
180.0 |
180.1 |
H14 |
C14 |
C15 |
C4 |
180.7 |
180.1 |
H14 |
C14 |
C15 |
H15 |
0.7 |
0.1 |
C15 |
C4 |
C11 |
H11 |
181.3 |
180.0 |
C11 |
C4 |
C15 |
C2 |
178.1 |
180.0 |
C4 |
C15 |
C14 |
H14 |
180.7 |
180.1 |
C14 |
C15 |
C4 |
H15 |
180.0 |
180.0 |
C15 |
C4 |
C2 |
C1 |
224.7 |
120.0 |
C15 |
C4 |
C2 |
C3 |
347.0 |
359.9 |
C15 |
C4 |
C2 |
C5 |
102.3 |
243.8 |
H15 |
C15 |
C14 |
H14 |
0.7 |
0.1 |
C14 |
C15 |
H15 |
C4 |
180.0 |
180.0 |
H15 |
C15 |
C4 |
C2 |
1.2 |
0.0 |
C2 |
C4 |
C11 |
H11 |
359.5 |
0.0 |
C11 |
C4 |
C2 |
C15 |
181.9 |
180.0 |
C2 |
C4 |
C15 |
H15 |
1.2 |
0.0 |
C3 |
C2 |
C4 |
C1 |
122.4 |
239.9 |
C5 |
C2 |
C4 |
C1 |
237.6 |
123.7 |
C4 |
C2 |
C1 |
C10 |
72.0 |
300.0 |
C4 |
C2 |
C1 |
C6 |
253.0 |
120.0 |
C3 |
C2 |
C4 |
C5 |
244.8 |
116.1 |
C4 |
C2 |
C3 |
H31 |
73.5 |
298.0 |
C4 |
C2 |
C3 |
H32 |
193.5 |
57.6 |
C4 |
C2 |
C3 |
H33 |
313.5 |
177.9 |
C4 |
C2 |
C5 |
H51 |
95.3 |
55.3 |
C4 |
C2 |
C5 |
H52 |
215.3 |
175.3 |
C4 |
C2 |
C5 |
H53 |
335.3 |
297.2 |
C4 |
C2 |
C1 |
C3 |
125.0 |
233.9 |
C4 |
C2 |
C1 |
C5 |
242.0 |
122.9 |
C3 |
C2 |
C1 |
C5 |
117.0 |
249.1 |
C1 |
C2 |
C3 |
H31 |
196.5 |
173.7 |
C1 |
C2 |
C3 |
H32 |
316.5 |
293.3 |
C1 |
C2 |
C3 |
H33 |
76.5 |
53.5 |
C1 |
C2 |
C5 |
H51 |
334.8 |
180.0 |
C1 |
C2 |
C5 |
H52 |
94.8 |
300.0 |
C1 |
C2 |
C5 |
H53 |
214.8 |
61.9 |
C10 |
C1 |
C2 |
C6 |
178.9 |
179.9 |
C2 |
C1 |
C10 |
C9 |
180.4 |
180.0 |
C2 |
C1 |
C10 |
H10 |
0.4 |
0.1 |
C2 |
C1 |
C6 |
C7 |
179.7 |
180.0 |
C2 |
C1 |
C6 |
H6 |
359.7 |
360.0 |
C4 |
C2 |
C3 |
C1 |
237.0 |
124.3 |
C4 |
C2 |
C3 |
C5 |
115.3 |
240.5 |
C5 |
C2 |
C3 |
C1 |
121.6 |
243.8 |
C3 |
C2 |
C1 |
C10 |
307.0 |
66.1 |
C3 |
C2 |
C1 |
C6 |
128.1 |
246.2 |
C3 |
C2 |
C5 |
H51 |
215.8 |
291.8 |
C3 |
C2 |
C5 |
H52 |
335.8 |
51.8 |
C3 |
C2 |
C5 |
H53 |
95.8 |
173.7 |
H31 |
C3 |
C2 |
H32 |
240.0 |
240.4 |
H31 |
C3 |
C2 |
H33 |
120.0 |
120.1 |
H32 |
C3 |
C2 |
H33 |
240.0 |
239.7 |
C4 |
C2 |
C5 |
C1 |
120.5 |
235.3 |
C4 |
C2 |
C5 |
C3 |
239.5 |
123.5 |
C3 |
C2 |
C5 |
C1 |
241.0 |
111.8 |
C5 |
C2 |
C1 |
C10 |
190.0 |
177.1 |
C5 |
C2 |
C1 |
C6 |
11.1 |
357.1 |
C5 |
C2 |
C3 |
H31 |
318.2 |
57.5 |
C5 |
C2 |
C3 |
H32 |
78.1 |
177.1 |
C5 |
C2 |
C3 |
H33 |
198.2 |
297.3 |
H51 |
C5 |
C2 |
H52 |
240.0 |
240.0 |
H51 |
C5 |
C2 |
H53 |
120.0 |
118.1 |
H52 |
C5 |
C2 |
H53 |
240.0 |
238.1 |
H31 |
C3 |
C2 |
C1 |
196.5 |
173.7 |
H31 |
C3 |
C2 |
C5 |
318.2 |
57.5 |
C2 |
C3 |
H31 |
H32 |
120.0 |
121.7 |
C2 |
C3 |
H31 |
H33 |
240.0 |
236.3 |
H32 |
C3 |
H31 |
H33 |
120.0 |
114.6 |
H32 |
C3 |
C2 |
C1 |
316.5 |
293.3 |
H32 |
C3 |
C2 |
C5 |
78.1 |
177.1 |
C2 |
C3 |
H32 |
H31 |
240.0 |
238.6 |
C2 |
C3 |
H32 |
H33 |
120.0 |
123.9 |
H31 |
C3 |
H32 |
H33 |
240.0 |
245.3 |
H33 |
C3 |
C2 |
C1 |
76.5 |
53.5 |
H33 |
C3 |
C2 |
C5 |
198.2 |
297.3 |
C2 |
C3 |
H33 |
H31 |
120.0 |
122.2 |
C2 |
C3 |
H33 |
H32 |
240.0 |
237.3 |
H31 |
C3 |
H33 |
H32 |
120.0 |
115.1 |
H51 |
C5 |
C2 |
C1 |
334.8 |
180.0 |
C2 |
C5 |
H51 |
H52 |
120.0 |
124.1 |
C2 |
C5 |
H51 |
H53 |
240.0 |
239.2 |
H52 |
C5 |
H51 |
H53 |
120.0 |
115.1 |
H52 |
C5 |
C2 |
C1 |
94.8 |
300.0 |
C2 |
C5 |
H52 |
H51 |
240.0 |
238.5 |
C2 |
C5 |
H52 |
H53 |
120.0 |
123.9 |
H51 |
C5 |
H52 |
H53 |
240.0 |
245.4 |
H53 |
C5 |
C2 |
C1 |
214.8 |
61.9 |
C2 |
C5 |
H53 |
H51 |
120.0 |
119.8 |
C2 |
C5 |
H53 |
H52 |
240.0 |
234.5 |
H51 |
C5 |
H53 |
H52 |
120.0 |
114.7 |
C2 |
C1 |
C10 |
C6 |
181.0 |
180.1 |
C10 |
C1 |
C6 |
C7 |
0.8 |
0.0 |
C10 |
C1 |
C6 |
H6 |
180.8 |
180.0 |
C9 |
C10 |
C1 |
H10 |
180.0 |
180.0 |
C1 |
C10 |
C9 |
C8 |
0.3 |
360.0 |
C1 |
C10 |
C9 |
H9 |
180.3 |
180.0 |
C2 |
C1 |
C6 |
C10 |
178.9 |
179.9 |
C6 |
C1 |
C10 |
C9 |
359.4 |
360.0 |
C6 |
C1 |
C10 |
H10 |
179.4 |
180.0 |
C7 |
C6 |
C1 |
H6 |
180.0 |
180.0 |
C1 |
C6 |
C7 |
C8 |
359.2 |
0.0 |
C1 |
C6 |
C7 |
H7 |
179.2 |
180.0 |
C9 |
C10 |
C1 |
C6 |
359.4 |
360.0 |
C1 |
C10 |
C9 |
H10 |
180.0 |
180.0 |
C8 |
C9 |
C10 |
H9 |
180.0 |
180.0 |
C10 |
C9 |
C8 |
C7 |
359.7 |
0.0 |
C10 |
C9 |
C8 |
O1 |
180.1 |
179.9 |
H10 |
C10 |
C1 |
C6 |
179.4 |
180.0 |
C1 |
C10 |
H10 |
C9 |
180.0 |
180.0 |
H10 |
C10 |
C9 |
C8 |
180.4 |
179.9 |
H10 |
C10 |
C9 |
H9 |
0.3 |
359.9 |
C8 |
C9 |
C10 |
H10 |
180.4 |
179.9 |
C10 |
C9 |
C8 |
H9 |
180.0 |
180.0 |
C6 |
C7 |
C8 |
C9 |
0.5 |
360.0 |
C9 |
C8 |
C7 |
H7 |
180.5 |
179.9 |
C7 |
C8 |
C9 |
O1 |
179.6 |
180.1 |
C9 |
C8 |
O1 |
HO1 |
117.9 |
348.8 |
H9 |
C9 |
C10 |
H10 |
0.3 |
359.9 |
C10 |
C9 |
H9 |
C8 |
180.0 |
180.0 |
H9 |
C9 |
C8 |
C7 |
179.7 |
180.0 |
H9 |
C9 |
C8 |
O1 |
0.1 |
359.9 |
C1 |
C6 |
C7 |
H6 |
180.0 |
180.0 |
C9 |
C8 |
C7 |
C6 |
0.5 |
360.0 |
C8 |
C7 |
C6 |
H7 |
180.0 |
180.0 |
C6 |
C7 |
C8 |
O1 |
180.1 |
180.1 |
C1 |
C6 |
H6 |
C7 |
180.0 |
180.0 |
H6 |
C6 |
C7 |
C8 |
179.2 |
180.0 |
H6 |
C6 |
C7 |
H7 |
359.2 |
360.0 |
C7 |
C8 |
C9 |
H9 |
179.7 |
180.0 |
C9 |
C8 |
C7 |
O1 |
180.4 |
179.9 |
C8 |
C7 |
C6 |
H6 |
179.2 |
180.0 |
C6 |
C7 |
C8 |
H7 |
180.0 |
180.0 |
C7 |
C8 |
O1 |
HO1 |
298.3 |
168.7 |
H7 |
C7 |
C6 |
H6 |
359.2 |
360.0 |
C6 |
C7 |
H7 |
C8 |
180.0 |
180.0 |
H7 |
C7 |
C8 |
O1 |
0.1 |
0.1 |
O1 |
C8 |
C9 |
H9 |
0.1 |
359.9 |
C9 |
C8 |
O1 |
C7 |
179.6 |
180.1 |
O1 |
C8 |
C7 |
H7 |
0.1 |
0.1 |