PDB Chemical Component 2NA
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 2NA
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.434 |
1.405 |
C1 |
C6 |
1.477 |
1.417 |
C1 |
C30 |
1.454 |
1.406 |
C2 |
C3 |
1.567 |
1.361 |
C3 |
C4 |
1.431 |
1.393 |
C3 |
C31 |
1.549 |
1.508 |
C4 |
C5 |
1.398 |
1.361 |
C5 |
C6 |
1.557 |
1.405 |
C6 |
C7 |
1.435 |
1.406 |
C7 |
C8 |
1.538 |
1.360 |
C8 |
C9 |
1.416 |
1.394 |
C9 |
C30 |
1.397 |
1.360 |
C31 |
O31 |
1.457 |
1.429 |
C2 |
H2 |
1.081 |
1.079 |
C4 |
H4 |
1.080 |
1.079 |
C5 |
H5 |
1.080 |
1.080 |
C7 |
H7 |
1.080 |
1.080 |
C8 |
H8 |
1.080 |
1.080 |
C9 |
H9 |
1.080 |
1.080 |
C30 |
H30 |
1.080 |
1.080 |
C31 |
H31 |
1.100 |
1.091 |
C31 |
H31A |
1.100 |
1.090 |
O31 |
HO31 |
0.950 |
0.966 |
Bond Angles for 2NA
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C6 |
119.3 |
119.4 |
C2 |
C1 |
C30 |
120.7 |
121.3 |
C1 |
C2 |
C3 |
119.9 |
119.6 |
C1 |
C2 |
H2 |
120.1 |
120.2 |
C6 |
C1 |
C30 |
120.0 |
119.3 |
C1 |
C6 |
C5 |
119.5 |
119.4 |
C1 |
C6 |
C7 |
119.2 |
119.4 |
C1 |
C30 |
C9 |
121.5 |
119.7 |
C1 |
C30 |
H30 |
119.3 |
120.1 |
C2 |
C3 |
C4 |
119.4 |
121.1 |
C2 |
C3 |
C31 |
119.6 |
119.5 |
C3 |
C2 |
H2 |
120.1 |
120.2 |
C4 |
C3 |
C31 |
120.7 |
119.5 |
C3 |
C4 |
C5 |
122.0 |
120.9 |
C3 |
C4 |
H4 |
119.0 |
119.5 |
C3 |
C31 |
O31 |
112.4 |
109.5 |
C3 |
C31 |
H31 |
108.5 |
109.4 |
C3 |
C31 |
H31A |
107.9 |
109.5 |
C4 |
C5 |
C6 |
120.0 |
119.7 |
C5 |
C4 |
H4 |
119.0 |
119.5 |
C4 |
C5 |
H5 |
120.0 |
120.1 |
C5 |
C6 |
C7 |
121.3 |
121.3 |
C6 |
C5 |
H5 |
120.0 |
120.2 |
C6 |
C7 |
C8 |
118.5 |
119.7 |
C6 |
C7 |
H7 |
120.7 |
120.2 |
C7 |
C8 |
C9 |
119.7 |
121.0 |
C8 |
C7 |
H7 |
120.8 |
120.2 |
C7 |
C8 |
H8 |
120.2 |
119.5 |
C8 |
C9 |
C30 |
121.2 |
121.0 |
C9 |
C8 |
H8 |
120.2 |
119.5 |
C8 |
C9 |
H9 |
119.4 |
119.5 |
C30 |
C9 |
H9 |
119.4 |
119.5 |
C9 |
C30 |
H30 |
119.3 |
120.2 |
O31 |
C31 |
H31 |
108.5 |
109.5 |
O31 |
C31 |
H31A |
107.9 |
109.5 |
C31 |
O31 |
HO31 |
109.5 |
114.0 |
H31 |
C31 |
H31A |
111.8 |
109.5 |
Torsion Angles for 2NA
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
C1 |
C2 |
C30 |
180.0 |
180.2 |
C2 |
C1 |
C6 |
C5 |
0.4 |
360.0 |
C2 |
C1 |
C6 |
C7 |
180.2 |
180.0 |
C2 |
C1 |
C30 |
C9 |
180.0 |
179.8 |
C2 |
C1 |
C30 |
H30 |
360.0 |
359.9 |
C1 |
C2 |
C3 |
C4 |
359.8 |
0.0 |
C1 |
C2 |
C3 |
C31 |
173.1 |
180.0 |
C3 |
C2 |
C1 |
H2 |
180.0 |
180.0 |
C2 |
C1 |
C6 |
C30 |
180.0 |
179.8 |
C6 |
C1 |
C2 |
C3 |
359.8 |
360.0 |
C6 |
C1 |
C2 |
H2 |
179.8 |
179.9 |
C6 |
C1 |
C30 |
C9 |
360.0 |
359.6 |
C6 |
C1 |
C30 |
H30 |
180.0 |
179.7 |
C4 |
C5 |
C6 |
C1 |
359.8 |
0.1 |
C5 |
C6 |
C1 |
C7 |
180.2 |
180.0 |
C1 |
C6 |
C5 |
H5 |
179.8 |
180.0 |
C1 |
C6 |
C7 |
C8 |
359.8 |
360.0 |
C1 |
C6 |
C7 |
H7 |
179.7 |
180.1 |
C2 |
C1 |
C30 |
C6 |
180.0 |
180.2 |
C30 |
C1 |
C2 |
C3 |
179.8 |
179.8 |
C30 |
C1 |
C2 |
H2 |
359.8 |
359.7 |
C30 |
C1 |
C6 |
C5 |
180.4 |
180.2 |
C30 |
C1 |
C6 |
C7 |
0.2 |
0.2 |
C8 |
C9 |
C30 |
C1 |
359.8 |
0.4 |
C1 |
C30 |
C9 |
H9 |
179.8 |
180.2 |
C9 |
C30 |
C1 |
H30 |
180.0 |
179.9 |
C3 |
C2 |
C1 |
C6 |
359.8 |
360.0 |
C3 |
C2 |
C1 |
C30 |
179.8 |
179.8 |
C1 |
C2 |
C3 |
H2 |
180.0 |
180.0 |
C4 |
C3 |
C2 |
C31 |
186.7 |
180.0 |
C2 |
C3 |
C4 |
C5 |
0.4 |
0.0 |
C2 |
C3 |
C4 |
H4 |
180.4 |
180.0 |
C2 |
C3 |
C31 |
O31 |
264.9 |
90.0 |
C2 |
C3 |
C31 |
H31 |
24.9 |
210.0 |
C2 |
C3 |
C31 |
H31A |
146.2 |
330.0 |
C2 |
C3 |
C4 |
C31 |
173.2 |
180.0 |
C4 |
C3 |
C2 |
H2 |
179.8 |
180.1 |
C4 |
C3 |
C31 |
O31 |
78.1 |
270.0 |
C4 |
C3 |
C31 |
H31 |
198.1 |
30.0 |
C4 |
C3 |
C31 |
H31A |
319.4 |
150.0 |
C3 |
C4 |
C5 |
C6 |
359.8 |
359.9 |
C5 |
C4 |
C3 |
H4 |
180.0 |
180.1 |
C3 |
C4 |
C5 |
H5 |
179.8 |
180.0 |
C2 |
C3 |
C31 |
C4 |
186.8 |
180.0 |
C31 |
C3 |
C2 |
H2 |
353.1 |
0.1 |
C31 |
C3 |
C4 |
C5 |
187.2 |
180.0 |
C31 |
C3 |
C4 |
H4 |
7.2 |
360.0 |
O31 |
C31 |
C3 |
H31 |
240.0 |
240.0 |
O31 |
C31 |
C3 |
H31A |
118.7 |
120.1 |
C3 |
C31 |
O31 |
HO31 |
252.0 |
180.0 |
H31 |
C31 |
C3 |
H31A |
238.7 |
240.0 |
C1 |
C6 |
C5 |
C4 |
359.8 |
0.1 |
C5 |
C4 |
C3 |
C31 |
187.2 |
180.0 |
C3 |
C4 |
C5 |
H4 |
180.0 |
179.9 |
C4 |
C5 |
C6 |
C7 |
180.0 |
180.1 |
C6 |
C5 |
C4 |
H5 |
180.0 |
179.9 |
C5 |
C6 |
C1 |
C30 |
180.4 |
180.2 |
C1 |
C6 |
C5 |
C7 |
179.8 |
180.0 |
C6 |
C5 |
C4 |
H4 |
179.8 |
180.0 |
C4 |
C5 |
C6 |
H5 |
180.0 |
180.1 |
C5 |
C6 |
C7 |
C8 |
179.6 |
180.0 |
C5 |
C6 |
C7 |
H7 |
359.6 |
0.1 |
C7 |
C6 |
C1 |
C30 |
0.2 |
0.2 |
C1 |
C6 |
C7 |
C5 |
180.2 |
180.0 |
C7 |
C6 |
C5 |
H5 |
360.0 |
0.0 |
C6 |
C7 |
C8 |
C9 |
0.1 |
0.0 |
C8 |
C7 |
C6 |
H7 |
180.0 |
179.9 |
C6 |
C7 |
C8 |
H8 |
180.1 |
180.0 |
C6 |
C7 |
C8 |
H7 |
180.0 |
180.1 |
C7 |
C8 |
C9 |
C30 |
0.1 |
359.8 |
C9 |
C8 |
C7 |
H8 |
180.0 |
180.0 |
C7 |
C8 |
C9 |
H9 |
180.1 |
180.0 |
C1 |
C30 |
C9 |
C8 |
359.8 |
0.4 |
C9 |
C8 |
C7 |
H7 |
180.1 |
179.9 |
C7 |
C8 |
C9 |
H8 |
180.0 |
180.0 |
C30 |
C9 |
C8 |
H9 |
180.0 |
179.8 |
C8 |
C9 |
C30 |
H30 |
179.8 |
180.3 |
C1 |
C30 |
C9 |
H30 |
180.0 |
180.1 |
C30 |
C9 |
C8 |
H8 |
180.1 |
179.8 |
C8 |
C9 |
C30 |
H9 |
180.0 |
180.2 |
C3 |
C31 |
O31 |
H31 |
120.0 |
120.0 |
C3 |
C31 |
O31 |
H31A |
241.3 |
240.0 |
H31 |
C31 |
O31 |
H31A |
121.3 |
120.0 |
H2 |
C2 |
C1 |
C6 |
179.8 |
179.9 |
H2 |
C2 |
C1 |
C30 |
359.8 |
359.7 |
C1 |
C2 |
H2 |
C3 |
180.0 |
180.0 |
H2 |
C2 |
C3 |
C4 |
179.8 |
180.1 |
H2 |
C2 |
C3 |
C31 |
353.1 |
0.1 |
H4 |
C4 |
C3 |
C31 |
7.2 |
360.0 |
C3 |
C4 |
H4 |
C5 |
180.0 |
180.1 |
H4 |
C4 |
C5 |
C6 |
179.8 |
180.0 |
H4 |
C4 |
C5 |
H5 |
359.8 |
0.0 |
C4 |
C5 |
H5 |
C6 |
180.0 |
179.9 |
H5 |
C5 |
C4 |
H4 |
359.8 |
0.0 |
H5 |
C5 |
C6 |
C7 |
360.0 |
0.0 |
C6 |
C7 |
H7 |
C8 |
180.0 |
179.9 |
H7 |
C7 |
C8 |
C9 |
180.1 |
179.9 |
H7 |
C7 |
C8 |
H8 |
0.1 |
360.0 |
C7 |
C8 |
H8 |
C9 |
180.0 |
180.0 |
H8 |
C8 |
C7 |
H7 |
0.1 |
360.0 |
H8 |
C8 |
C9 |
C30 |
180.1 |
179.8 |
H8 |
C8 |
C9 |
H9 |
0.1 |
360.0 |
C8 |
C9 |
H9 |
C30 |
180.0 |
179.8 |
H9 |
C9 |
C8 |
H8 |
0.1 |
360.0 |
H9 |
C9 |
C30 |
H30 |
359.8 |
0.1 |
C1 |
C30 |
H30 |
C9 |
180.0 |
179.9 |
H30 |
C30 |
C9 |
H9 |
359.8 |
0.1 |
C3 |
C31 |
H31 |
O31 |
237.6 |
240.0 |
C3 |
C31 |
H31 |
H31A |
118.8 |
119.9 |
O31 |
C31 |
H31 |
H31A |
241.2 |
239.9 |
H31 |
C31 |
O31 |
HO31 |
132.0 |
60.0 |
C3 |
C31 |
H31A |
O31 |
121.6 |
120.0 |
C3 |
C31 |
H31A |
H31 |
240.8 |
240.1 |
O31 |
C31 |
H31A |
H31 |
119.2 |
120.0 |
H31A |
C31 |
O31 |
HO31 |
10.8 |
300.0 |
HO31 |
O31 |
C31 |
H31 |
132.0 |
60.0 |
HO31 |
O31 |
C31 |
H31A |
10.8 |
300.0 |