PDB Chemical Component 2MN
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 2MN
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| OHD |
CB6 |
1.332 |
1.429 |
| OHD |
HHD |
0.950 |
0.967 |
| CB6 |
CB5 |
1.258 |
1.529 |
| CB6 |
HB6 |
1.115 |
1.090 |
| CB6 |
H6 |
1.115 |
1.090 |
| CB5 |
NC1 |
1.290 |
1.465 |
| CB5 |
HB5 |
1.115 |
1.090 |
| CB5 |
H5 |
1.115 |
1.090 |
| NC1 |
CC3 |
1.328 |
1.350 |
| NC1 |
CC2 |
1.335 |
1.369 |
| CC3 |
CA5 |
1.477 |
1.507 |
| CC3 |
NC4 |
1.353 |
1.305 |
| CA5 |
HA51 |
1.115 |
1.090 |
| CA5 |
HA52 |
1.114 |
1.089 |
| CA5 |
HA53 |
1.115 |
1.090 |
| NC4 |
CC5 |
1.350 |
1.340 |
| CC5 |
CC2 |
1.391 |
1.347 |
| CC5 |
HC5 |
1.103 |
1.081 |
| CC2 |
NO |
1.362 |
1.480 |
| NO |
OB |
1.220 |
1.219 |
| NO |
OA |
1.229 |
1.218 |
Bond Angles for 2MN
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CB6 |
OHD |
HHD |
119.9 |
106.8 |
| OHD |
CB6 |
CB5 |
119.9 |
109.5 |
| OHD |
CB6 |
HB6 |
108.5 |
109.4 |
| OHD |
CB6 |
H6 |
108.5 |
109.5 |
| CB5 |
CB6 |
HB6 |
108.4 |
109.4 |
| CB5 |
CB6 |
H6 |
108.5 |
109.5 |
| CB6 |
CB5 |
NC1 |
121.9 |
109.5 |
| CB6 |
CB5 |
HB5 |
107.8 |
109.4 |
| CB6 |
CB5 |
H5 |
107.8 |
109.5 |
| HB6 |
CB6 |
H6 |
101.5 |
109.5 |
| NC1 |
CB5 |
HB5 |
107.8 |
109.4 |
| NC1 |
CB5 |
H5 |
107.8 |
109.4 |
| CB5 |
NC1 |
CC3 |
126.1 |
126.4 |
| CB5 |
NC1 |
CC2 |
126.2 |
126.4 |
| HB5 |
CB5 |
H5 |
102.1 |
109.5 |
| CC3 |
NC1 |
CC2 |
107.7 |
107.2 |
| NC1 |
CC3 |
CA5 |
137.2 |
125.6 |
| NC1 |
CC3 |
NC4 |
110.6 |
108.7 |
| NC1 |
CC2 |
CC5 |
107.9 |
106.8 |
| NC1 |
CC2 |
NO |
128.9 |
126.6 |
| CA5 |
CC3 |
NC4 |
112.2 |
125.7 |
| CC3 |
CA5 |
HA51 |
137.3 |
109.5 |
| CC3 |
CA5 |
HA52 |
102.8 |
109.5 |
| CC3 |
CA5 |
HA53 |
102.8 |
109.5 |
| CC3 |
NC4 |
CC5 |
106.5 |
109.3 |
| HA51 |
CA5 |
HA52 |
102.7 |
109.5 |
| HA51 |
CA5 |
HA53 |
102.7 |
109.5 |
| HA52 |
CA5 |
HA53 |
105.6 |
109.5 |
| NC4 |
CC5 |
CC2 |
107.4 |
108.0 |
| NC4 |
CC5 |
HC5 |
126.3 |
126.0 |
| CC2 |
CC5 |
HC5 |
126.3 |
126.0 |
| CC5 |
CC2 |
NO |
123.2 |
126.6 |
| CC2 |
NO |
OB |
119.2 |
120.0 |
| CC2 |
NO |
OA |
120.0 |
120.0 |
| OB |
NO |
OA |
120.8 |
120.0 |
Torsion Angles for 2MN
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CB5 |
CB6 |
OHD |
HB6 |
125.2 |
240.1 |
| CB5 |
CB6 |
OHD |
H6 |
234.7 |
120.1 |
| OHD |
CB6 |
CB5 |
NC1 |
43.6 |
180.0 |
| OHD |
CB6 |
CB5 |
HB5 |
168.9 |
299.9 |
| OHD |
CB6 |
CB5 |
H5 |
278.3 |
60.0 |
| HB6 |
CB6 |
OHD |
H6 |
109.5 |
240.0 |
| HHD |
OHD |
CB6 |
CB5 |
180.0 |
180.0 |
| HHD |
OHD |
CB6 |
HB6 |
54.8 |
300.0 |
| HHD |
OHD |
CB6 |
H6 |
305.3 |
60.0 |
| CB5 |
CB6 |
OHD |
HHD |
180.0 |
180.0 |
| OHD |
CB6 |
CB5 |
HB6 |
234.7 |
119.9 |
| OHD |
CB6 |
CB5 |
H6 |
125.3 |
239.9 |
| HB6 |
CB6 |
CB5 |
H6 |
250.5 |
120.0 |
| NC1 |
CB5 |
CB6 |
HB5 |
234.7 |
240.0 |
| NC1 |
CB5 |
CB6 |
H5 |
125.3 |
120.0 |
| CB6 |
CB5 |
NC1 |
CC3 |
63.3 |
269.5 |
| CB6 |
CB5 |
NC1 |
CC2 |
245.1 |
89.9 |
| HB5 |
CB5 |
CB6 |
H5 |
250.5 |
240.0 |
| HB6 |
CB6 |
OHD |
HHD |
54.8 |
300.0 |
| OHD |
CB6 |
HB6 |
CB5 |
131.7 |
240.0 |
| OHD |
CB6 |
HB6 |
H6 |
245.9 |
120.0 |
| CB5 |
CB6 |
HB6 |
H6 |
114.1 |
240.0 |
| HB6 |
CB6 |
CB5 |
NC1 |
168.9 |
60.0 |
| HB6 |
CB6 |
CB5 |
HB5 |
294.1 |
180.0 |
| HB6 |
CB6 |
CB5 |
H5 |
43.6 |
300.0 |
| H6 |
CB6 |
OHD |
HHD |
305.3 |
60.0 |
| OHD |
CB6 |
H6 |
CB5 |
228.3 |
120.0 |
| OHD |
CB6 |
H6 |
HB6 |
114.2 |
240.0 |
| CB5 |
CB6 |
H6 |
HB6 |
245.9 |
120.0 |
| H6 |
CB6 |
CB5 |
NC1 |
278.4 |
300.0 |
| H6 |
CB6 |
CB5 |
HB5 |
43.6 |
60.0 |
| H6 |
CB6 |
CB5 |
H5 |
153.1 |
180.0 |
| NC1 |
CB5 |
CB6 |
HB6 |
168.9 |
60.0 |
| NC1 |
CB5 |
CB6 |
H6 |
278.4 |
300.0 |
| CB6 |
CB5 |
NC1 |
HB5 |
125.3 |
120.0 |
| CB6 |
CB5 |
NC1 |
H5 |
234.7 |
240.0 |
| HB5 |
CB5 |
NC1 |
H5 |
109.5 |
120.0 |
| CC3 |
NC1 |
CB5 |
CC2 |
178.2 |
179.6 |
| CB5 |
NC1 |
CC3 |
CA5 |
1.6 |
0.2 |
| CB5 |
NC1 |
CC3 |
NC4 |
181.1 |
179.9 |
| CB5 |
NC1 |
CC2 |
CC5 |
178.7 |
180.1 |
| CB5 |
NC1 |
CC2 |
NO |
358.9 |
359.9 |
| HB5 |
CB5 |
CB6 |
HB6 |
294.1 |
180.0 |
| HB5 |
CB5 |
CB6 |
H6 |
43.6 |
60.0 |
| CB6 |
CB5 |
HB5 |
NC1 |
226.7 |
240.0 |
| CB6 |
CB5 |
HB5 |
H5 |
113.3 |
120.1 |
| NC1 |
CB5 |
HB5 |
H5 |
246.6 |
240.1 |
| HB5 |
CB5 |
NC1 |
CC3 |
298.0 |
149.6 |
| HB5 |
CB5 |
NC1 |
CC2 |
119.8 |
329.9 |
| H5 |
CB5 |
CB6 |
HB6 |
43.6 |
300.0 |
| H5 |
CB5 |
CB6 |
H6 |
153.1 |
180.0 |
| CB6 |
CB5 |
H5 |
NC1 |
133.3 |
120.0 |
| CB6 |
CB5 |
H5 |
HB5 |
246.7 |
240.0 |
| NC1 |
CB5 |
H5 |
HB5 |
113.3 |
120.0 |
| H5 |
CB5 |
NC1 |
CC3 |
188.5 |
29.6 |
| H5 |
CB5 |
NC1 |
CC2 |
10.4 |
209.9 |
| CC3 |
NC1 |
CB5 |
HB5 |
298.0 |
149.6 |
| CC3 |
NC1 |
CB5 |
H5 |
188.5 |
29.6 |
| CB5 |
NC1 |
CC3 |
CC2 |
181.5 |
180.3 |
| CC3 |
NC1 |
CC2 |
CC5 |
0.3 |
0.4 |
| CC3 |
NC1 |
CC2 |
NO |
180.4 |
180.2 |
| CA5 |
CC3 |
NC1 |
NC4 |
180.5 |
180.3 |
| NC1 |
CC3 |
CA5 |
HA51 |
180.0 |
269.7 |
| NC1 |
CC3 |
CA5 |
HA52 |
54.7 |
29.7 |
| NC1 |
CC3 |
CA5 |
HA53 |
305.3 |
149.7 |
| NC1 |
CC3 |
NC4 |
CC5 |
0.4 |
0.3 |
| CC2 |
NC1 |
CB5 |
HB5 |
119.8 |
329.9 |
| CC2 |
NC1 |
CB5 |
H5 |
10.4 |
209.9 |
| CB5 |
NC1 |
CC2 |
CC3 |
178.5 |
179.7 |
| CC2 |
NC1 |
CC3 |
CA5 |
180.0 |
179.9 |
| CC2 |
NC1 |
CC3 |
NC4 |
359.6 |
359.6 |
| NC4 |
CC5 |
CC2 |
NC1 |
360.0 |
359.8 |
| NC1 |
CC2 |
CC5 |
HC5 |
180.0 |
179.8 |
| CC5 |
CC2 |
NC1 |
NO |
179.9 |
180.2 |
| NC1 |
CC2 |
NO |
OB |
0.1 |
180.3 |
| NC1 |
CC2 |
NO |
OA |
180.0 |
0.3 |
| CA5 |
CC3 |
NC1 |
CC2 |
180.0 |
179.9 |
| NC1 |
CC3 |
CA5 |
NC4 |
179.5 |
179.7 |
| CA5 |
CC3 |
NC4 |
CC5 |
180.1 |
180.0 |
| HA51 |
CA5 |
CC3 |
HA52 |
125.2 |
240.0 |
| HA51 |
CA5 |
CC3 |
HA53 |
234.7 |
120.0 |
| HA52 |
CA5 |
CC3 |
HA53 |
109.5 |
240.0 |
| NC4 |
CC3 |
NC1 |
CC2 |
359.6 |
359.6 |
| NC1 |
CC3 |
NC4 |
CA5 |
180.4 |
180.3 |
| NC4 |
CC3 |
CA5 |
HA51 |
0.5 |
90.0 |
| NC4 |
CC3 |
CA5 |
HA52 |
235.2 |
210.0 |
| NC4 |
CC3 |
CA5 |
HA53 |
125.8 |
330.0 |
| CC3 |
NC4 |
CC5 |
CC2 |
359.8 |
360.0 |
| CC3 |
NC4 |
CC5 |
HC5 |
179.8 |
180.0 |
| HA51 |
CA5 |
CC3 |
NC4 |
0.5 |
90.0 |
| CC3 |
CA5 |
HA51 |
HA52 |
234.7 |
120.0 |
| CC3 |
CA5 |
HA51 |
HA53 |
125.3 |
240.0 |
| HA52 |
CA5 |
HA51 |
HA53 |
250.6 |
120.0 |
| HA52 |
CA5 |
CC3 |
NC4 |
235.2 |
210.0 |
| CC3 |
CA5 |
HA52 |
HA51 |
145.4 |
240.0 |
| CC3 |
CA5 |
HA52 |
HA53 |
252.7 |
120.0 |
| HA51 |
CA5 |
HA52 |
HA53 |
107.3 |
240.0 |
| HA53 |
CA5 |
CC3 |
NC4 |
125.8 |
330.0 |
| CC3 |
CA5 |
HA53 |
HA51 |
214.6 |
120.0 |
| CC3 |
CA5 |
HA53 |
HA52 |
107.3 |
240.0 |
| HA51 |
CA5 |
HA53 |
HA52 |
252.7 |
120.0 |
| NC1 |
CC2 |
CC5 |
NC4 |
360.0 |
359.8 |
| CC2 |
CC5 |
NC4 |
HC5 |
180.0 |
180.0 |
| NC4 |
CC5 |
CC2 |
NO |
179.8 |
180.0 |
| NC1 |
CC2 |
CC5 |
NO |
180.1 |
179.8 |
| NC4 |
CC5 |
CC2 |
HC5 |
180.0 |
180.0 |
| CC5 |
CC2 |
NO |
OB |
180.3 |
0.0 |
| CC5 |
CC2 |
NO |
OA |
0.1 |
180.1 |
| NC4 |
CC5 |
HC5 |
CC2 |
180.0 |
180.0 |
| HC5 |
CC5 |
CC2 |
NO |
359.8 |
360.0 |
| NC1 |
CC2 |
NO |
CC5 |
179.8 |
180.3 |
| NO |
CC2 |
CC5 |
HC5 |
359.8 |
360.0 |
| OB |
NO |
CC2 |
OA |
180.1 |
180.0 |
| CC2 |
NO |
OB |
OA |
179.9 |
180.0 |
| CC2 |
NO |
OA |
OB |
180.1 |
180.0 |