PDB Chemical Component 2MK

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 2MK

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C35 C34 1.394 1.382
C35 C30 1.399 1.382
C29 C30 1.411 1.507
C29 O28 1.423 1.452
C34 C33 1.392 1.383
C40 C38 1.528 1.530
C30 C31 1.399 1.383
C39 C38 1.531 1.530
C38 C37 1.534 1.530
O28 C27 1.374 1.347
C27 O36 1.233 1.215
C27 N26 1.346 1.348
C33 C32 1.392 1.382
N26 C25 1.475 1.465
C31 C32 1.396 1.383
C37 C25 1.530 1.531
C25 C24 1.534 1.506
C24 N23 1.346 1.348
C24 O41 1.231 1.213
N23 C22 1.476 1.465
C22 C42 1.533 1.529
C22 C21 1.535 1.507
C42 C43 1.538 1.530
O46 C21 1.229 1.213
C44 C43 1.541 1.530
C21 N20 1.339 1.348
C43 C45 1.534 1.530
C19 C13 1.539 1.529
N20 C11 1.465 1.465
C13 C47 1.539 1.530
C13 C12 1.532 1.530
C11 C12 1.547 1.530
C11 C1 1.542 1.531
C9 C1 1.550 1.530
C1 O10 1.449 1.429
C9 O1 1.482 1.430
C13 H1 1.100 1.090
C22 H2 1.101 1.090
C9 H3 1.100 1.090
C9 H4 1.100 1.090
C1 H5 1.100 1.090
O10 H6 0.950 0.967
C11 H7 1.101 1.090
C12 H8 1.100 1.090
C12 H9 1.100 1.089
C47 H10 1.100 1.090
C47 H11 1.100 1.089
C47 H12 1.100 1.090
C19 H13 1.100 1.089
C19 H14 1.100 1.090
C19 H15 1.100 1.090
N20 H16 1.000 0.971
C42 H17 1.100 1.091
C42 H18 1.100 1.090
C43 H19 1.100 1.090
C45 H20 1.100 1.090
C45 H21 1.100 1.090
C45 H22 1.100 1.090
C44 H23 1.100 1.090
C44 H24 1.100 1.090
C44 H25 1.100 1.090
N23 H26 1.000 0.970
C25 H27 1.100 1.089
C37 H28 1.100 1.090
C37 H29 1.100 1.090
C38 H30 1.100 1.091
C40 H31 1.100 1.090
C40 H32 1.100 1.090
C40 H33 1.100 1.091
C39 H34 1.100 1.090
C39 H35 1.100 1.091
C39 H36 1.100 1.089
N26 H37 1.000 0.969
C29 H38 1.100 1.091
C29 H39 1.100 1.089
C31 H40 1.080 1.079
C32 H41 1.080 1.080
C33 H42 1.080 1.079
C34 H43 1.080 1.081
C35 H44 1.080 1.080
O1 H45 0.950 0.968

Bond Angles for 2MK

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C35 C34 C33 120.1 120.0
C35 C34 H43 119.9 120.0
C34 C35 H44 119.6 120.0
C35 C30 C31 118.8 120.0
C29 C30 C31 120.5 120.0
C30 C29 H38 110.1 109.5
C30 C29 H39 110.1 109.5
C34 C33 C32 119.7 119.9
C34 C33 H42 120.2 120.0
C33 C34 H43 120.0 119.9
C40 C38 H30 109.4 109.5
C30 C31 C32 120.4 120.0
C30 C31 H40 119.8 120.0
C39 C38 H30 109.4 109.5
C38 C37 H28 109.1 109.5
C38 C37 H29 109.1 109.5
O28 C27 N26 118.9 120.0
O36 C27 N26 119.8 120.0
C27 N26 C25 122.3 120.0
C27 N26 H37 118.9 120.0
C33 C32 H41 119.8 120.0
C32 C33 H42 120.2 120.0
N26 C25 C24 108.3 109.5
N26 C25 H27 110.5 109.5
C25 N26 H37 118.8 120.0
C31 C32 H41 119.9 120.0
C37 C25 H27 109.7 109.5
C25 C24 N23 116.1 120.0
C25 C24 O41 119.9 120.0
C24 C25 H27 109.7 109.5
O41 C24 N23 124.0 120.0
C24 N23 C22 121.7 120.0
C24 N23 H26 119.2 120.0
N23 C22 C42 110.2 109.5
N23 C22 C21 109.2 109.4
N23 C22 H2 109.1 109.5
C22 N23 H26 119.1 120.0
C21 C22 C42 111.5 109.5
C22 C42 C43 110.5 109.5
C42 C22 H2 108.4 109.5
C22 C42 H17 109.2 109.5
C22 C42 H18 109.2 109.5
C22 C21 N20 114.1 120.0
C21 C22 H2 108.4 109.5
C42 C43 C45 108.3 109.4
C43 C42 H17 109.2 109.4
C43 C42 H18 109.2 109.5
C42 C43 H19 109.1 109.5
O46 C21 N20 124.5 120.0
C44 C43 C45 110.1 109.5
C44 C43 H19 109.1 109.5
C21 N20 C11 123.0 120.0
C21 N20 H16 118.5 120.0
C45 C43 H19 109.2 109.5
C43 C45 H20 109.5 109.5
C43 C45 H21 109.5 109.5
C43 C45 H22 109.4 109.4
C19 C13 H1 109.0 109.4
N20 C11 H7 110.8 109.5
C12 C13 C47 108.4 109.5
C47 C13 H1 109.0 109.4
C13 C47 H10 109.5 109.4
C13 C47 H11 109.5 109.5
C13 C47 H12 109.5 109.5
C13 C12 C11 114.4 109.4
C12 C13 H1 109.1 109.5
C13 C12 H8 108.2 109.4
C13 C12 H9 108.2 109.5
C12 C11 H7 109.7 109.5
C11 C12 H8 108.2 109.5
C11 C12 H9 108.2 109.5
C11 C1 H5 108.5 109.5
C9 C1 O10 111.2 109.5
C1 C9 O1 113.6 109.5
C1 C9 H3 108.4 109.5
C1 C9 H4 108.4 109.5
C9 C1 H5 108.4 109.5
O10 C1 H5 109.8 109.5
C1 O10 H6 109.5 114.0
O1 C9 H3 108.4 109.5
O1 C9 H4 108.4 109.4
C9 O1 H45 109.5 114.0
H3 C9 H4 109.4 109.5
H8 C12 H9 109.5 109.4
H10 C47 H11 109.5 109.5
H10 C47 H12 109.5 109.4
H11 C47 H12 109.4 109.5
H13 C19 H14 109.4 109.5
H13 C19 H15 109.5 109.5
H14 C19 H15 109.4 109.4
H17 C42 H18 109.5 109.4
H20 C45 H21 109.5 109.5
H20 C45 H22 109.5 109.5
H21 C45 H22 109.5 109.5
H23 C44 H24 109.4 109.5
H23 C44 H25 109.5 109.5
H24 C44 H25 109.5 109.4
H28 C37 H29 109.4 109.5
H31 C40 H32 109.4 109.5
H31 C40 H33 109.5 109.4
H32 C40 H33 109.5 109.5
H34 C39 H35 109.5 109.5
H34 C39 H36 109.4 109.5
H35 C39 H36 109.5 109.4
H38 C29 H39 109.5 109.4

Torsion Angles for 2MK

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C34 C35 C30 C31 0.6 0.3
C35 C34 C33 C32 360.0 360.0
C35 C34 C33 H42 180.0 179.9
C33 C34 C35 H43 180.0 180.0
C29 C30 C35 C31 179.0 179.7
C35 C30 C29 H38 250.6 150.3
C35 C30 C29 H39 11.5 30.3
C35 C30 C31 C32 359.4 359.5
C35 C30 C31 H40 179.4 179.7
C35 C30 C29 C31 181.0 180.3
C29 C30 C31 C32 180.5 179.8
C29 C30 C31 H40 0.4 0.0
H38 C29 C30 H39 239.2 120.0
C29 O28 C27 N26 159.5 180.3
C35 C34 C33 H43 180.0 180.0
C33 C34 C35 H44 179.7 180.0
C34 C33 C32 H41 180.1 179.9
C32 C33 C34 H42 180.0 180.1
C39 C38 C40 H30 240.2 240.0
C40 C38 C37 H28 33.3 175.0
C40 C38 C37 H29 152.8 55.0
C31 C30 C29 H38 69.6 330.0
C31 C30 C29 H39 190.4 210.0
C30 C31 C32 H41 180.2 180.3
C40 C38 C39 H30 119.8 120.0
C39 C38 C37 H28 273.2 55.0
C39 C38 C37 H29 32.7 295.0
C38 C37 C25 H27 53.8 55.0
H28 C37 C38 H29 240.5 120.0
O36 C27 O28 N26 178.9 179.7
O28 C27 N26 C25 178.2 179.7
O28 C27 N26 H37 358.2 359.8
O28 C27 O36 N26 181.1 180.3
O36 C27 N26 C25 359.3 360.0
O36 C27 N26 H37 179.3 180.1
C27 N26 C25 C24 282.6 205.0
C27 N26 C25 H27 42.7 325.1
C25 N26 C27 H37 180.0 179.9
C34 C33 C32 H42 180.0 179.9
C32 C33 C34 H43 180.0 180.0
C30 C31 C32 C33 0.2 0.4
C31 C32 C33 H41 180.0 179.9
C27 N26 C25 H37 180.0 180.1
C37 C25 N26 H27 121.3 120.0
N26 C25 C24 N23 142.5 180.0
N26 C25 C24 O41 322.7 0.1
C24 C25 N26 H27 239.9 239.9
C30 C31 C32 H40 180.0 180.2
C33 C32 C31 H41 180.0 180.1
C31 C32 C33 H42 180.0 179.9
N26 C25 C37 H27 238.3 240.0
C37 C25 N26 H37 343.9 265.0
C37 C25 C24 N23 262.0 299.9
C24 C25 C37 H27 119.9 120.0
N26 C25 C24 H27 120.6 120.1
C24 C25 N26 H37 102.6 24.9
C37 C25 C24 H27 240.1 240.0
O41 C24 C25 N23 180.2 180.1
C25 C24 N23 C22 180.1 180.0
C25 C24 N23 H26 0.1 0.1
C25 C24 N23 O41 180.2 180.1
N23 C24 C25 H27 21.9 59.9
C24 N23 C22 C42 136.7 85.1
C24 N23 C22 C21 259.5 205.0
C24 N23 C22 H2 17.8 325.0
C22 N23 C24 H26 180.0 180.0
C25 C24 O41 N23 179.7 179.9
O41 C24 C25 H27 202.2 240.0
O41 C24 N23 C22 359.9 359.9
O41 C24 N23 H26 179.8 180.0
C24 N23 C22 H26 180.0 180.0
C21 C22 N23 C42 122.8 120.0
N23 C22 C42 C43 223.7 295.0
C42 C22 N23 H2 118.9 120.0
N23 C22 C42 H17 343.8 55.0
N23 C22 C42 H18 103.5 174.9
N23 C22 C21 N20 147.2 180.0
C21 C22 N23 H2 241.7 240.0
N23 C22 C42 C21 121.5 119.9
N23 C22 C42 H2 240.7 240.0
C42 C22 N23 H26 316.7 265.0
C42 C22 C21 N20 269.2 300.0
C21 C22 C42 H2 119.2 120.0
C22 C42 C43 C45 188.1 295.0
C43 C42 C22 H17 239.8 240.0
C43 C42 C22 H18 120.2 120.0
C22 C42 C43 H19 306.8 55.0
H17 C42 C22 H18 240.3 240.0
N23 C22 C21 C42 238.0 240.0
N23 C22 C21 H2 118.8 120.0
C21 C22 N23 H26 79.5 25.0
C21 C22 C42 C43 102.2 175.0
C42 C22 C21 H2 240.8 240.0
C21 C22 C42 H17 222.3 295.0
C21 C22 C42 H18 342.0 55.0
O46 C21 C22 N20 180.8 180.0
C22 C21 N20 C11 186.0 180.0
C22 C21 N20 H16 6.0 360.0
C43 C42 C22 H2 343.0 55.0
C22 C42 C43 H17 120.2 120.0
C22 C42 C43 H18 239.9 240.0
C44 C43 C42 C45 239.0 240.0
C44 C43 C42 H19 120.3 120.0
C45 C43 C42 H19 241.3 240.0
C42 C43 C45 H20 180.0 300.0
C42 C43 C45 H21 300.0 60.0
C42 C43 C45 H22 60.0 180.0
H17 C42 C43 H18 119.7 119.9
O46 C21 C22 C42 90.0 120.0
C22 C21 O46 N20 179.1 180.0
O46 C21 C22 H2 209.2 240.0
O46 C21 N20 C11 5.2 0.0
O46 C21 N20 H16 185.2 180.0
C42 C43 C44 C45 119.9 119.9
C44 C43 C42 H17 306.9 55.0
C44 C43 C42 H18 187.2 295.1
C42 C43 C44 H19 239.7 240.0
C45 C43 C44 H19 119.8 120.0
C44 C43 C45 H20 301.5 59.9
C44 C43 C45 H21 61.5 180.0
C44 C43 C45 H22 181.5 300.0
N20 C21 C22 C42 269.2 300.0
N20 C21 C22 H2 28.4 60.0
C21 N20 C11 H7 351.0 35.0
C45 C43 C42 H17 67.9 175.0
C45 C43 C42 H18 308.2 55.1
C42 C43 C45 H19 118.7 120.0
C44 C43 C45 H19 240.2 239.9
H20 C45 C43 H21 240.0 239.9
H20 C45 C43 H22 120.0 120.0
H21 C45 C43 H22 240.0 240.0
C47 C13 C19 H1 119.5 240.1
C19 C13 C47 H10 180.0 299.9
C19 C13 C47 H11 300.0 60.0
C19 C13 C47 H12 60.0 180.0
C12 C13 C19 H1 239.6 120.0
C19 C13 C12 H8 175.8 55.0
C19 C13 C12 H9 294.3 175.0
C21 N20 C11 H16 180.0 180.0
C12 C11 N20 H7 117.5 120.0
N20 C11 C12 H8 117.1 175.0
N20 C11 C12 H9 358.5 55.0
N20 C11 C1 H5 196.1 179.9
C19 C13 C47 H1 240.5 119.9
C47 C13 C12 C11 176.1 175.0
C12 C13 C47 H1 118.6 240.0
C47 C13 C12 H8 296.9 295.0
C47 C13 C12 H9 55.4 55.0
H10 C47 C13 H11 240.0 239.9
H10 C47 C13 H12 120.0 119.9
H11 C47 C13 H12 240.0 240.0
C19 C13 C12 H1 120.4 240.0
C47 C13 C12 H1 241.5 120.0
C12 C13 C47 H10 58.1 60.0
C12 C13 C47 H11 178.1 180.0
C12 C13 C47 H12 298.1 300.0
C13 C12 C11 H7 356.1 55.0
C11 C12 C13 H8 239.3 240.0
C11 C12 C13 H9 120.7 120.0
H8 C12 C13 H9 241.4 240.0
C21 N20 C11 C12 108.5 155.0
N20 C11 C12 H7 241.7 240.0
C11 C12 C13 C47 176.1 175.0
C11 C12 C13 H1 294.7 55.0
C13 C12 C11 H8 120.7 120.0
C13 C12 C11 H9 239.3 240.0
C12 C11 C1 H5 311.3 300.0
H8 C12 C11 H9 118.5 120.0
C21 N20 C11 C1 228.9 275.0
C13 C12 C11 C1 118.2 175.0
C11 C1 C9 O1 166.9 175.0
C11 C1 C9 H3 287.5 295.0
C11 C1 C9 H4 46.3 55.0
C9 C1 C11 H5 241.2 240.0
O10 C1 C11 H5 119.2 120.0
C11 C1 O10 H6 180.0 60.0
C11 C1 C9 H5 118.8 120.0
O10 C1 C9 H5 239.2 239.9
C9 C1 O10 H6 58.3 300.0
O1 C9 C1 H3 239.4 240.0
O1 C9 C1 H4 120.6 120.0
C1 C9 O1 H45 180.0 180.0
H3 C9 C1 H4 241.3 239.9
C11 C1 O10 H5 241.6 240.0
O10 C1 C9 O1 287.3 294.9
O10 C1 C9 H3 47.9 54.9
O10 C1 C9 H4 166.6 175.0
C9 C1 O10 H5 120.0 120.0
O1 C9 C1 O10 287.3 294.9
C1 C9 O1 H3 120.6 120.0
C1 C9 O1 H4 239.4 240.0
O1 C9 C1 H5 48.1 55.0
H3 C9 O1 H4 118.7 120.0
C12 C13 H1 C47 241.9 120.0
H1 C13 C47 H10 299.5 180.0
H1 C13 C47 H11 59.5 300.1
H1 C13 C47 H12 179.5 60.1
H1 C13 C12 C11 294.7 55.0
H1 C13 C12 H8 55.4 175.0
H1 C13 C12 H9 174.0 295.0
N23 C22 H2 C42 120.0 120.0
N23 C22 H2 C21 241.2 240.0
H2 C22 N23 H26 197.8 145.0
C21 C22 H2 C42 238.8 240.0
H2 C22 C42 C43 343.0 55.0
H2 C22 C42 H17 103.1 175.0
H2 C22 C42 H18 222.8 295.0
H2 C22 C21 N20 28.4 60.0
H3 C9 C1 O10 47.9 54.9
C1 C9 H3 O1 236.2 240.0
C1 C9 H3 H4 118.1 120.1
H3 C9 C1 H5 168.7 175.0
O1 C9 H3 H4 241.9 240.1
H3 C9 O1 H45 59.4 59.9
H4 C9 C1 O10 166.6 175.0
C1 C9 H4 O1 123.8 120.0
C1 C9 H4 H3 241.9 239.9
H4 C9 C1 H5 287.4 295.0
O1 C9 H4 H3 118.1 120.0
H4 C9 O1 H45 300.6 300.0
C9 C1 H5 O10 238.3 240.0
H5 C1 C9 O1 48.1 55.0
H5 C1 C9 H3 168.7 175.0
H5 C1 C9 H4 287.4 295.0
H5 C1 O10 H6 298.3 180.0
H6 O10 C1 H5 298.3 180.0
H7 C11 C12 H8 235.4 295.0
H7 C11 C12 H9 116.8 175.0
H7 C11 C1 H5 73.4 60.0
H8 C12 C13 C47 296.9 295.0
C13 C12 H8 C11 235.5 240.0
H8 C12 C13 H1 55.4 175.0
C13 C12 H8 H9 117.8 120.0
H8 C12 C11 H7 235.4 295.0
C11 C12 H8 H9 242.3 240.0
H9 C12 C13 C47 55.4 55.0
C13 C12 H9 C11 124.5 120.0
H9 C12 C13 H1 174.0 295.0
C13 C12 H9 H8 242.2 240.0
H9 C12 C11 H7 116.8 175.0
C11 C12 H9 H8 117.7 120.1
H10 C47 C13 H1 299.5 180.0
C13 C47 H10 H11 120.0 120.0
C13 C47 H10 H12 240.0 240.1
H11 C47 H10 H12 120.0 120.0
H11 C47 C13 H1 59.5 300.1
C13 C47 H11 H10 240.0 240.0
C13 C47 H11 H12 120.0 120.0
H10 C47 H11 H12 240.0 240.0
H12 C47 C13 H1 179.5 60.1
C13 C47 H12 H10 120.0 119.9
C13 C47 H12 H11 240.0 240.0
H10 C47 H12 H11 120.0 120.1
H13 C19 C13 H1 60.5 180.0
H14 C19 H13 H15 120.0 119.9
H14 C19 C13 H1 180.5 300.0
H13 C19 H14 H15 240.0 240.0
H15 C19 C13 H1 300.5 59.9
H13 C19 H15 H14 120.0 120.0
C21 N20 H16 C11 180.0 180.0
H16 N20 C11 H7 171.0 215.0
C22 C42 H17 C43 239.1 240.0
H17 C42 C22 H2 103.1 175.0
C22 C42 H17 H18 119.5 120.0
H17 C42 C43 C45 67.9 175.0
C43 C42 H17 H18 240.5 240.0
H17 C42 C43 H19 186.7 295.0
C22 C42 H18 C43 120.9 120.0
H18 C42 C22 H2 222.8 295.0
C22 C42 H18 H17 240.5 240.0
H18 C42 C43 C45 308.2 55.1
C43 C42 H18 H17 119.5 119.9
H18 C42 C43 H19 67.0 175.0
C42 C43 H19 C45 241.8 240.1
H19 C43 C42 H17 186.7 295.0
H19 C43 C42 H18 67.0 175.0
C44 C43 H19 C45 120.4 120.0
H19 C43 C45 H20 61.3 180.0
H19 C43 C45 H21 181.3 300.1
H19 C43 C45 H22 301.3 60.0
H20 C45 C43 H19 61.3 180.0
C43 C45 H20 H21 120.0 120.0
C43 C45 H20 H22 240.0 240.1
H21 C45 H20 H22 120.0 120.1
H21 C45 C43 H19 181.3 300.1
C43 C45 H21 H20 240.0 240.0
C43 C45 H21 H22 120.0 119.9
H20 C45 H21 H22 240.0 239.9
H22 C45 C43 H19 301.3 60.0
C43 C45 H22 H20 120.0 120.0
C43 C45 H22 H21 240.0 240.1
H20 C45 H22 H21 120.0 120.1
H23 C44 C43 C45 60.1 300.0
H23 C44 C43 H19 300.3 180.0
H24 C44 H23 H25 120.0 120.0
H24 C44 C43 C45 180.1 60.1
H24 C44 C43 H19 60.3 300.0
H23 C44 H24 H25 240.0 240.0
H25 C44 C43 C45 300.1 180.0
H25 C44 C43 H19 180.3 59.9
H23 C44 H25 H24 120.0 120.0
C24 N23 H26 C22 180.0 180.0
H26 N23 C22 C42 316.7 265.0
H26 N23 C22 C21 79.5 25.0
H26 N23 C22 H2 197.8 145.0
N26 C25 H27 C24 240.8 239.9
H27 C25 N26 H37 222.7 145.0
H27 C25 C24 N23 21.9 59.9
H27 C25 C24 O41 202.2 240.0
C38 C37 H28 H29 119.3 240.0
H28 C37 C25 H27 293.6 175.0
C38 C37 H29 H28 240.7 120.0
H29 C37 C25 H27 174.1 295.0
H30 C38 C37 H28 153.4 295.0
H30 C38 C37 H29 272.9 175.0
H31 C40 C38 H30 299.8 299.9
H32 C40 H31 H33 120.0 120.0
H32 C40 C38 H30 59.8 60.0
H31 C40 H32 H33 240.0 240.0
H33 C40 C38 H30 179.8 180.0
H31 C40 H33 H32 120.0 120.0
H34 C39 C38 H30 60.2 180.0
H35 C39 H34 H36 120.0 120.0
H35 C39 C38 H30 180.2 300.0
H34 C39 H35 H36 240.0 240.0
H36 C39 C38 H30 300.2 60.0
H34 C39 H36 H35 120.0 120.0
C27 N26 H37 C25 180.0 179.9
H37 N26 C25 C24 102.6 24.9
H37 N26 C25 H27 222.7 145.0
H38 C29 C30 C31 69.6 330.0
C30 C29 H38 H39 121.2 240.0
H39 C29 C30 C31 190.4 210.0
C30 C29 H39 H38 238.8 120.0
C30 C31 H40 C32 180.0 179.8
H40 C31 C32 H41 0.2 0.1
H41 C32 C33 H42 0.1 360.0
C34 C33 H42 C32 180.0 180.1
H42 C33 C34 H43 360.0 359.9
H42 C33 C32 H41 0.1 360.0
C35 C34 H43 C33 180.0 180.0
H43 C34 C35 H44 359.7 360.0
H43 C34 C33 C32 180.0 180.0
H43 C34 C33 H42 360.0 359.9
H44 C35 C34 C33 179.7 180.0
H44 C35 C34 H43 359.7 360.0
H44 C35 C30 C31 180.6 180.3
H45 O1 C9 H3 59.4 59.9
H45 O1 C9 H4 300.6 300.0