PDB Chemical Component 2M5

Ideal Model

Chemical Description

Name methyl 7-deoxy-L-glycero-alpha-D-manno-heptopyranoside
Synonyms methyl 7-deoxy-L-glycero-alpha-D-manno-heptoside; methyl 7-deoxy-L-glycero-D-manno-heptoside; methyl 7-deoxy-L-glycero-manno-heptoside
Formula C8 H16 O6
Formal charge 0
Molecular weight 208.209 g/mol
Component type D-saccharide
Nonstandard Parent Id MAN

Chemical features

Atom count 30
Chiral atom count 6
Chiral atoms C1 C2 C3 C4 C5 C6
Observed leaving atoms HO2 HO3 HO4 HO6
Bond count 30
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) methyl 7-deoxy-L-glycero-alpha-D-manno-heptopyranoside
Systematic name (OpenEye OEToolkits) (2R,3S,4S,5S,6S)-2-[(1S)-1-hydroxyethyl]-6-methoxy-oxane-3,4,5-triol

Chemical Descriptors

Stereo SMILES (CACTVS) CO[C@H]1O[C@H]([C@H](C)O)[C@@H](O)[C@H](O)[C@@H]1O
SMILES (CACTVS) CO[CH]1O[CH]([CH](C)O)[CH](O)[CH](O)[CH]1O
Stereo SMILES (OpenEye) C[C@@H]([C@@H]1[C@H]([C@@H]([C@@H]([C@H](O1)OC)O)O)O)O
InChI descriptor InChI=1S/C8H16O6/c1-3(9)7-5(11)4(10)6(12)8(13-2)14-7/h3-12H,1-2H3/t3-,4-,5-,6-,7+,8-/m0/s1
InChIKey descriptor PNWOVLBMFHSUMR-IHKZFYOVSA-N

Status Information

Last modified 2020-07-17
Created 2010-08-16
Release status REL
Model PDB code 3OAZ
Processing site RCSB