PDB Chemical Component 2LJ

Ideal Model

Chemical Description

Name 1-deoxy-1-({2,6-dioxo-5-[(E)-propylideneamino]-1,2,3,6-tetrahydropyrimidin-4-yl}amino)-D-ribitol
Synonyms 5-(2-oxopropylideneamino)-6-D-ribitylaminouracil
Formula C12 H20 N4 O6
Formal charge 0
Molecular weight 316.310 g/mol
Component type NON-POLYMER

Chemical features

Atom count 42
Chiral atom count 3
Chiral atoms C2' C3' C4'
Bond count 42
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) 1-deoxy-1-({2,6-dioxo-5-[(E)-propylideneamino]-1,2,3,6-tetrahydropyrimidin-4-yl}amino)-D-ribitol
Systematic name (OpenEye OEToolkits) 5-[(~{E})-propylideneamino]-6-[[(2~{S},3~{S},4~{R})-2,3,4,5-tetrakis(oxidanyl)pentyl]amino]-1~{H}-pyrimidine-2,4-dione

Chemical Descriptors

Stereo SMILES (CACTVS) CCC=NC1=C(NC[C@H](O)[C@H](O)[C@H](O)CO)NC(=O)NC1=O
SMILES (CACTVS) CCC=NC1=C(NC[CH](O)[CH](O)[CH](O)CO)NC(=O)NC1=O
Stereo SMILES (OpenEye) CC/C=N/C1=C(NC(=O)NC1=O)NC[C@@H]([C@@H]([C@@H](CO)O)O)O
InChI descriptor InChI=1S/C12H20N4O6/c1-2-3-13-8-10(15-12(22)16-11(8)21)14-4-6(18)9(20)7(19)5-17/h3,6-7,9,17-20H,2,4-5H2,1H3,(H3,14,15,16,21,22)/b13-3+/t6-,7+,9-/m0/s1
InChIKey descriptor YCMPUNANLDFPQG-FHZGFTDOSA-N

Status Information

Last modified 2021-03-01
Created 2013-11-27
Release status REL
Model PDB code 6MWR
Processing site RCSB