PDB Chemical Component 2KU
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 2KU
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C15 |
O12 |
1.430 |
1.429 |
C13 |
C12 |
1.530 |
1.529 |
C13 |
O12 |
1.435 |
1.429 |
C12 |
C11 |
1.530 |
1.530 |
C11 |
N10 |
1.469 |
1.466 |
N1 |
C2 |
1.327 |
1.321 |
N1 |
C6 |
1.341 |
1.329 |
C2 |
N3 |
1.327 |
1.317 |
N3 |
C4 |
1.339 |
1.329 |
C4 |
C5 |
1.375 |
1.406 |
C4 |
N9 |
1.328 |
1.372 |
C5 |
C6 |
1.383 |
1.405 |
C5 |
N7 |
1.327 |
1.355 |
C6 |
N10 |
1.330 |
1.384 |
N7 |
C8 |
1.336 |
1.302 |
C8 |
N9 |
1.336 |
1.363 |
C15 |
H151 |
1.100 |
1.090 |
C15 |
H152 |
1.100 |
1.090 |
C15 |
H153 |
1.100 |
1.090 |
C13 |
H131 |
1.100 |
1.090 |
C13 |
H132 |
1.100 |
1.090 |
C12 |
H121 |
1.100 |
1.090 |
C12 |
H122 |
1.100 |
1.090 |
C11 |
H111 |
1.100 |
1.090 |
C11 |
H112 |
1.100 |
1.090 |
N10 |
H10 |
1.000 |
0.971 |
C2 |
H2 |
1.080 |
1.079 |
N9 |
H9 |
1.000 |
0.971 |
C8 |
H8 |
1.079 |
1.079 |
Bond Angles for 2KU
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C15 |
O12 |
C13 |
109.5 |
114.0 |
O12 |
C15 |
H151 |
109.5 |
109.5 |
O12 |
C15 |
H152 |
109.5 |
109.4 |
O12 |
C15 |
H153 |
109.5 |
109.5 |
C12 |
C13 |
O12 |
109.5 |
109.5 |
C13 |
C12 |
C11 |
110.9 |
109.5 |
C12 |
C13 |
H131 |
109.5 |
109.5 |
C12 |
C13 |
H132 |
109.5 |
109.5 |
C13 |
C12 |
H121 |
109.0 |
109.5 |
C13 |
C12 |
H122 |
109.0 |
109.5 |
O12 |
C13 |
H131 |
109.4 |
109.5 |
O12 |
C13 |
H132 |
109.4 |
109.5 |
C12 |
C11 |
N10 |
109.5 |
109.5 |
C11 |
C12 |
H121 |
109.0 |
109.5 |
C11 |
C12 |
H122 |
109.0 |
109.5 |
C12 |
C11 |
H111 |
109.4 |
109.5 |
C12 |
C11 |
H112 |
109.5 |
109.5 |
C11 |
N10 |
C6 |
120.0 |
120.0 |
N10 |
C11 |
H111 |
109.5 |
109.5 |
N10 |
C11 |
H112 |
109.5 |
109.5 |
C11 |
N10 |
H10 |
106.1 |
120.0 |
C2 |
N1 |
C6 |
120.6 |
121.2 |
N1 |
C2 |
N3 |
121.5 |
122.4 |
N1 |
C2 |
H2 |
119.3 |
118.8 |
N1 |
C6 |
C5 |
119.0 |
118.5 |
N1 |
C6 |
N10 |
120.5 |
120.7 |
C2 |
N3 |
C4 |
120.5 |
120.6 |
N3 |
C2 |
H2 |
119.3 |
118.7 |
N3 |
C4 |
C5 |
119.5 |
119.1 |
N3 |
C4 |
N9 |
133.1 |
135.0 |
C5 |
C4 |
N9 |
107.4 |
106.0 |
C4 |
C5 |
C6 |
118.9 |
118.2 |
C4 |
C5 |
N7 |
107.7 |
107.1 |
C4 |
N9 |
C8 |
108.0 |
107.5 |
C4 |
N9 |
H9 |
126.0 |
126.2 |
C6 |
C5 |
N7 |
133.4 |
134.7 |
C5 |
C6 |
N10 |
120.4 |
120.8 |
C5 |
N7 |
C8 |
107.9 |
109.4 |
C6 |
N10 |
H10 |
106.1 |
120.0 |
N7 |
C8 |
N9 |
109.0 |
109.9 |
N7 |
C8 |
H8 |
125.5 |
125.0 |
C8 |
N9 |
H9 |
126.0 |
126.3 |
N9 |
C8 |
H8 |
125.5 |
125.0 |
H151 |
C15 |
H152 |
109.5 |
109.5 |
H151 |
C15 |
H153 |
109.5 |
109.5 |
H152 |
C15 |
H153 |
109.5 |
109.5 |
H131 |
C13 |
H132 |
109.5 |
109.5 |
H121 |
C12 |
H122 |
110.0 |
109.5 |
H111 |
C11 |
H112 |
109.5 |
109.5 |
Torsion Angles for 2KU
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C12 |
C13 |
O12 |
C15 |
207.4 |
180.0 |
C15 |
O12 |
C13 |
H131 |
87.4 |
60.0 |
C15 |
O12 |
C13 |
H132 |
327.5 |
300.0 |
H151 |
C15 |
O12 |
H152 |
240.0 |
240.0 |
H151 |
C15 |
O12 |
H153 |
120.0 |
120.0 |
H152 |
C15 |
O12 |
H153 |
240.0 |
240.0 |
C15 |
O12 |
C13 |
C12 |
207.4 |
180.0 |
O12 |
C13 |
C12 |
H131 |
240.0 |
240.0 |
O12 |
C13 |
C12 |
H132 |
120.0 |
120.0 |
C13 |
C12 |
C11 |
N10 |
44.3 |
180.0 |
C11 |
C12 |
C13 |
H121 |
240.0 |
240.0 |
C11 |
C12 |
C13 |
H122 |
120.0 |
120.0 |
C13 |
C12 |
C11 |
H111 |
164.3 |
300.0 |
C13 |
C12 |
C11 |
H112 |
284.3 |
60.0 |
H131 |
C13 |
C12 |
H132 |
240.0 |
240.0 |
H121 |
C12 |
C13 |
H122 |
240.0 |
240.0 |
C13 |
O12 |
C15 |
H151 |
180.0 |
60.0 |
C13 |
O12 |
C15 |
H152 |
300.0 |
180.0 |
C13 |
O12 |
C15 |
H153 |
60.0 |
300.0 |
O12 |
C13 |
C12 |
C11 |
24.6 |
180.0 |
C12 |
C13 |
O12 |
H131 |
120.0 |
120.0 |
C12 |
C13 |
O12 |
H132 |
240.0 |
240.0 |
O12 |
C13 |
C12 |
H121 |
144.6 |
300.0 |
O12 |
C13 |
C12 |
H122 |
264.6 |
60.0 |
H131 |
C13 |
O12 |
H132 |
120.0 |
120.0 |
C11 |
C12 |
C13 |
O12 |
24.6 |
180.0 |
C11 |
C12 |
C13 |
H131 |
144.6 |
300.0 |
C11 |
C12 |
C13 |
H132 |
264.6 |
60.0 |
C13 |
C12 |
C11 |
H121 |
120.0 |
120.0 |
C13 |
C12 |
C11 |
H122 |
240.0 |
240.0 |
C12 |
C11 |
N10 |
C6 |
166.6 |
180.0 |
N10 |
C11 |
C12 |
H111 |
240.0 |
240.0 |
N10 |
C11 |
C12 |
H112 |
120.0 |
120.0 |
C12 |
C11 |
N10 |
H10 |
286.6 |
360.0 |
H121 |
C12 |
C11 |
H122 |
120.0 |
120.0 |
H111 |
C11 |
C12 |
H112 |
240.0 |
240.0 |
N10 |
C11 |
C12 |
H121 |
284.3 |
60.0 |
N10 |
C11 |
C12 |
H122 |
164.3 |
300.0 |
C12 |
C11 |
N10 |
H111 |
120.0 |
120.0 |
C12 |
C11 |
N10 |
H112 |
240.0 |
240.0 |
N1 |
C6 |
N10 |
C11 |
213.3 |
-0.0 |
C5 |
C6 |
N10 |
C11 |
33.3 |
180.0 |
C6 |
N10 |
C11 |
H10 |
240.0 |
180.0 |
H111 |
C11 |
N10 |
H112 |
120.0 |
120.0 |
C2 |
N1 |
C6 |
C5 |
0.1 |
359.9 |
C2 |
N1 |
C6 |
N10 |
180.0 |
179.9 |
N1 |
C2 |
N3 |
C4 |
0.1 |
359.9 |
N3 |
C2 |
N1 |
H2 |
180.0 |
180.1 |
C11 |
N10 |
C6 |
N1 |
213.3 |
360.0 |
C6 |
N1 |
C2 |
N3 |
359.9 |
0.1 |
C6 |
N1 |
C2 |
H2 |
180.0 |
180.0 |
C4 |
C5 |
C6 |
N1 |
359.9 |
0.0 |
N1 |
C6 |
C5 |
N7 |
180.0 |
180.1 |
C5 |
C6 |
N1 |
N10 |
180.1 |
180.0 |
N1 |
C6 |
N10 |
H10 |
93.3 |
180.0 |
N3 |
C2 |
N1 |
C6 |
359.9 |
0.1 |
N1 |
C2 |
N3 |
H2 |
180.0 |
179.9 |
C2 |
N3 |
C4 |
C5 |
359.9 |
0.0 |
C2 |
N3 |
C4 |
N9 |
180.0 |
179.9 |
C4 |
N3 |
C2 |
H2 |
180.1 |
180.0 |
C5 |
C4 |
N3 |
N9 |
179.9 |
180.2 |
N3 |
C4 |
C5 |
C6 |
0.1 |
360.0 |
N3 |
C4 |
C5 |
N7 |
180.0 |
179.9 |
N3 |
C4 |
N9 |
C8 |
179.9 |
180.1 |
N3 |
C4 |
N9 |
H9 |
359.9 |
0.1 |
N1 |
C6 |
C5 |
C4 |
359.9 |
0.0 |
N3 |
C4 |
C5 |
N9 |
180.1 |
179.9 |
C5 |
C4 |
N9 |
C8 |
0.0 |
359.9 |
C5 |
C4 |
N9 |
H9 |
180.0 |
180.0 |
C6 |
C5 |
C4 |
N7 |
180.0 |
180.0 |
C4 |
C5 |
C6 |
N10 |
180.0 |
180.0 |
C4 |
C5 |
N7 |
C8 |
0.0 |
360.0 |
N3 |
C4 |
N9 |
C5 |
179.9 |
180.1 |
N9 |
C4 |
C5 |
C6 |
180.0 |
180.1 |
N9 |
C4 |
C5 |
N7 |
360.0 |
0.1 |
N7 |
C8 |
N9 |
C4 |
0.0 |
0.1 |
C8 |
N9 |
C4 |
H9 |
180.0 |
179.9 |
C4 |
N9 |
C8 |
H8 |
180.0 |
180.0 |
C11 |
N10 |
C6 |
C5 |
33.3 |
180.0 |
N1 |
C6 |
C5 |
N10 |
179.9 |
180.0 |
C6 |
C5 |
C4 |
N9 |
180.0 |
180.1 |
C4 |
C5 |
C6 |
N7 |
179.9 |
180.0 |
C6 |
C5 |
N7 |
C8 |
180.0 |
180.0 |
C5 |
C6 |
N10 |
H10 |
273.3 |
-0.0 |
N7 |
C5 |
C4 |
N9 |
360.0 |
0.1 |
C4 |
C5 |
N7 |
C6 |
180.1 |
180.0 |
N7 |
C5 |
C6 |
N10 |
0.0 |
0.1 |
C5 |
N7 |
C8 |
N9 |
360.0 |
360.0 |
C5 |
N7 |
C8 |
H8 |
180.0 |
180.0 |
C6 |
N10 |
C11 |
H111 |
46.6 |
60.0 |
C6 |
N10 |
C11 |
H112 |
286.6 |
300.0 |
C11 |
N10 |
C6 |
H10 |
120.0 |
180.0 |
N1 |
C6 |
N10 |
C5 |
180.1 |
180.0 |
N10 |
C6 |
C5 |
N7 |
0.0 |
0.1 |
C4 |
N9 |
C8 |
N7 |
0.0 |
0.1 |
N7 |
C8 |
N9 |
H9 |
180.0 |
180.0 |
N9 |
C8 |
N7 |
H8 |
180.0 |
179.9 |
C4 |
N9 |
C8 |
H9 |
180.0 |
180.1 |
N7 |
C8 |
N9 |
H8 |
180.0 |
180.1 |
H151 |
C15 |
O12 |
C13 |
180.0 |
60.0 |
O12 |
C15 |
H151 |
H152 |
120.0 |
120.0 |
O12 |
C15 |
H151 |
H153 |
240.0 |
240.0 |
H152 |
C15 |
H151 |
H153 |
120.0 |
120.0 |
H152 |
C15 |
O12 |
C13 |
300.0 |
180.0 |
O12 |
C15 |
H152 |
H151 |
240.0 |
240.0 |
O12 |
C15 |
H152 |
H153 |
120.0 |
120.0 |
H151 |
C15 |
H152 |
H153 |
240.0 |
240.0 |
H153 |
C15 |
O12 |
C13 |
60.0 |
300.0 |
O12 |
C15 |
H153 |
H151 |
120.0 |
120.1 |
O12 |
C15 |
H153 |
H152 |
240.0 |
240.1 |
H151 |
C15 |
H153 |
H152 |
120.0 |
120.0 |
C12 |
C13 |
H131 |
O12 |
240.0 |
240.0 |
H131 |
C13 |
C12 |
C11 |
144.6 |
300.0 |
C12 |
C13 |
H131 |
H132 |
120.0 |
120.0 |
H131 |
C13 |
C12 |
H121 |
264.5 |
60.0 |
H131 |
C13 |
C12 |
H122 |
24.5 |
180.0 |
O12 |
C13 |
H131 |
H132 |
240.0 |
240.0 |
C12 |
C13 |
H132 |
O12 |
120.1 |
120.0 |
H132 |
C13 |
C12 |
C11 |
264.6 |
60.0 |
C12 |
C13 |
H132 |
H131 |
240.0 |
240.0 |
H132 |
C13 |
C12 |
H121 |
24.6 |
180.0 |
H132 |
C13 |
C12 |
H122 |
144.6 |
300.0 |
O12 |
C13 |
H132 |
H131 |
119.9 |
120.0 |
H121 |
C12 |
C13 |
O12 |
144.6 |
300.0 |
C13 |
C12 |
H121 |
C11 |
238.8 |
240.0 |
H121 |
C12 |
C13 |
H131 |
264.5 |
60.0 |
H121 |
C12 |
C13 |
H132 |
24.6 |
180.0 |
C13 |
C12 |
H121 |
H122 |
119.4 |
120.0 |
H121 |
C12 |
C11 |
N10 |
284.3 |
60.0 |
C11 |
C12 |
H121 |
H122 |
240.6 |
240.0 |
H121 |
C12 |
C11 |
H111 |
44.3 |
180.0 |
H121 |
C12 |
C11 |
H112 |
164.3 |
300.0 |
H122 |
C12 |
C13 |
O12 |
264.6 |
60.0 |
C13 |
C12 |
H122 |
C11 |
121.2 |
120.0 |
H122 |
C12 |
C13 |
H131 |
24.5 |
180.0 |
H122 |
C12 |
C13 |
H132 |
144.6 |
300.0 |
C13 |
C12 |
H122 |
H121 |
240.6 |
240.0 |
H122 |
C12 |
C11 |
N10 |
164.3 |
300.0 |
C11 |
C12 |
H122 |
H121 |
119.4 |
120.0 |
H122 |
C12 |
C11 |
H111 |
284.3 |
60.0 |
H122 |
C12 |
C11 |
H112 |
44.3 |
180.0 |
C12 |
C11 |
H111 |
N10 |
240.0 |
240.0 |
H111 |
C11 |
C12 |
H121 |
44.3 |
180.0 |
H111 |
C11 |
C12 |
H122 |
284.3 |
60.0 |
C12 |
C11 |
H111 |
H112 |
120.0 |
120.0 |
H111 |
C11 |
N10 |
C6 |
46.6 |
60.0 |
N10 |
C11 |
H111 |
H112 |
240.0 |
240.0 |
H111 |
C11 |
N10 |
H10 |
166.6 |
240.0 |
C12 |
C11 |
H112 |
N10 |
120.1 |
120.0 |
H112 |
C11 |
C12 |
H121 |
164.3 |
300.0 |
H112 |
C11 |
C12 |
H122 |
44.3 |
180.0 |
C12 |
C11 |
H112 |
H111 |
240.0 |
240.0 |
H112 |
C11 |
N10 |
C6 |
286.6 |
300.0 |
N10 |
C11 |
H112 |
H111 |
120.0 |
120.0 |
H112 |
C11 |
N10 |
H10 |
46.6 |
120.0 |
C11 |
N10 |
H10 |
C6 |
231.3 |
180.0 |
H10 |
N10 |
C11 |
H111 |
166.6 |
240.0 |
H10 |
N10 |
C11 |
H112 |
46.6 |
120.0 |
H2 |
C2 |
N1 |
C6 |
180.0 |
180.0 |
N1 |
C2 |
H2 |
N3 |
180.0 |
180.0 |
H2 |
C2 |
N3 |
C4 |
180.1 |
180.0 |
C4 |
N9 |
H9 |
C8 |
180.0 |
179.9 |
H9 |
N9 |
C8 |
H8 |
360.0 |
359.9 |
N7 |
C8 |
H8 |
N9 |
180.0 |
179.9 |
H8 |
C8 |
N9 |
H9 |
360.0 |
359.9 |