PDB Chemical Component 2IM
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 2IM
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N2 |
C1 |
1.336 |
1.293 |
N2 |
HN2 |
1.001 |
0.970 |
C1 |
N1 |
1.336 |
1.381 |
C1 |
C2 |
1.511 |
1.514 |
N1 |
C4 |
1.491 |
1.467 |
N1 |
HN1 |
1.000 |
0.970 |
C4 |
C5 |
1.514 |
1.531 |
C4 |
H41 |
1.101 |
1.090 |
C4 |
H42 |
1.100 |
1.090 |
C5 |
C3 |
1.539 |
1.531 |
C5 |
H51 |
1.100 |
1.090 |
C5 |
H52 |
1.100 |
1.091 |
C3 |
C2 |
1.541 |
1.534 |
C3 |
H31 |
1.100 |
1.089 |
C3 |
H32 |
1.100 |
1.091 |
C2 |
H21 |
1.100 |
1.090 |
C2 |
H22 |
1.100 |
1.089 |
Bond Angles for 2IM
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C1 |
N2 |
HN2 |
107.7 |
120.0 |
N2 |
C1 |
N1 |
120.1 |
121.3 |
N2 |
C1 |
C2 |
116.4 |
121.3 |
N1 |
C1 |
C2 |
120.3 |
117.4 |
C1 |
N1 |
C4 |
123.0 |
117.9 |
C1 |
N1 |
HN1 |
118.5 |
120.9 |
C1 |
C2 |
C3 |
115.4 |
108.4 |
C1 |
C2 |
H21 |
106.2 |
109.6 |
C1 |
C2 |
H22 |
107.6 |
109.7 |
C4 |
N1 |
HN1 |
118.5 |
121.2 |
N1 |
C4 |
C5 |
112.1 |
108.8 |
N1 |
C4 |
H41 |
108.0 |
109.7 |
N1 |
C4 |
H42 |
108.6 |
109.5 |
C5 |
C4 |
H41 |
108.0 |
109.6 |
C5 |
C4 |
H42 |
108.6 |
109.6 |
C4 |
C5 |
C3 |
109.2 |
109.5 |
C4 |
C5 |
H51 |
109.6 |
109.5 |
C4 |
C5 |
H52 |
109.6 |
109.5 |
H41 |
C4 |
H42 |
111.5 |
109.7 |
C3 |
C5 |
H51 |
109.7 |
109.4 |
C3 |
C5 |
H52 |
109.6 |
109.4 |
C5 |
C3 |
C2 |
110.3 |
109.3 |
C5 |
C3 |
H31 |
109.0 |
109.5 |
C5 |
C3 |
H32 |
109.2 |
109.5 |
H51 |
C5 |
H52 |
109.3 |
109.5 |
C2 |
C3 |
H31 |
109.0 |
109.5 |
C2 |
C3 |
H32 |
109.2 |
109.5 |
C3 |
C2 |
H21 |
106.2 |
109.6 |
C3 |
C2 |
H22 |
107.5 |
109.7 |
H31 |
C3 |
H32 |
110.2 |
109.6 |
H21 |
C2 |
H22 |
114.3 |
109.8 |
Torsion Angles for 2IM
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
N1 |
C1 |
N2 |
C2 |
159.5 |
179.7 |
N2 |
C1 |
N1 |
C4 |
187.4 |
226.7 |
N2 |
C1 |
N1 |
HN1 |
7.4 |
46.9 |
N2 |
C1 |
C2 |
C3 |
177.3 |
132.4 |
N2 |
C1 |
C2 |
H21 |
60.0 |
252.1 |
N2 |
C1 |
C2 |
H22 |
297.2 |
12.7 |
HN2 |
N2 |
C1 |
N1 |
159.5 |
359.7 |
HN2 |
N2 |
C1 |
C2 |
0.0 |
180.0 |
N1 |
C1 |
N2 |
HN2 |
159.5 |
359.7 |
N2 |
C1 |
N1 |
C2 |
201.3 |
180.3 |
N1 |
C1 |
C2 |
C3 |
17.8 |
312.7 |
N1 |
C1 |
C2 |
H21 |
260.5 |
72.4 |
N1 |
C1 |
C2 |
H22 |
137.8 |
193.0 |
C4 |
N1 |
C1 |
HN1 |
180.0 |
179.8 |
C1 |
N1 |
C4 |
C5 |
32.8 |
310.7 |
C1 |
N1 |
C4 |
H41 |
273.9 |
190.8 |
C1 |
N1 |
C4 |
H42 |
152.8 |
70.5 |
C2 |
C1 |
N2 |
HN2 |
0.0 |
180.0 |
N2 |
C1 |
C2 |
N1 |
159.5 |
179.7 |
C2 |
C1 |
N1 |
C4 |
346.1 |
46.3 |
C2 |
C1 |
N1 |
HN1 |
166.1 |
226.6 |
C5 |
C3 |
C2 |
C1 |
319.9 |
54.6 |
C1 |
C2 |
C3 |
H31 |
79.6 |
174.6 |
C1 |
C2 |
C3 |
H32 |
199.9 |
294.7 |
C3 |
C2 |
C1 |
H21 |
117.3 |
240.3 |
C3 |
C2 |
C1 |
H22 |
240.0 |
119.7 |
H21 |
C2 |
C1 |
H22 |
122.7 |
239.4 |
C4 |
N1 |
C1 |
C2 |
346.1 |
46.3 |
C1 |
N1 |
C4 |
HN1 |
180.0 |
180.2 |
C5 |
C4 |
N1 |
H41 |
118.9 |
119.8 |
C5 |
C4 |
N1 |
H42 |
240.0 |
240.2 |
N1 |
C4 |
C5 |
C3 |
306.1 |
56.6 |
N1 |
C4 |
C5 |
H51 |
185.9 |
296.7 |
N1 |
C4 |
C5 |
H52 |
66.0 |
176.6 |
H41 |
C4 |
N1 |
H42 |
121.1 |
120.4 |
HN1 |
N1 |
C1 |
C2 |
166.1 |
226.6 |
C1 |
N1 |
HN1 |
C4 |
180.0 |
179.8 |
HN1 |
N1 |
C4 |
C5 |
212.8 |
130.5 |
HN1 |
N1 |
C4 |
H41 |
93.9 |
10.6 |
HN1 |
N1 |
C4 |
H42 |
332.8 |
250.2 |
C5 |
C4 |
N1 |
HN1 |
212.8 |
130.5 |
N1 |
C4 |
C5 |
H41 |
241.1 |
240.1 |
N1 |
C4 |
C5 |
H42 |
120.0 |
119.7 |
H41 |
C4 |
C5 |
H42 |
238.9 |
239.6 |
C3 |
C5 |
C4 |
H51 |
120.1 |
120.0 |
C3 |
C5 |
C4 |
H52 |
240.0 |
240.0 |
C4 |
C5 |
C3 |
C2 |
58.2 |
297.8 |
C4 |
C5 |
C3 |
H31 |
298.6 |
177.8 |
C4 |
C5 |
C3 |
H32 |
178.2 |
57.7 |
H51 |
C5 |
C4 |
H52 |
119.9 |
120.0 |
H41 |
C4 |
N1 |
HN1 |
93.9 |
10.6 |
N1 |
C4 |
H41 |
C5 |
121.4 |
119.4 |
N1 |
C4 |
H41 |
H42 |
240.7 |
239.8 |
C5 |
C4 |
H41 |
H42 |
119.3 |
120.3 |
H41 |
C4 |
C5 |
C3 |
65.0 |
176.6 |
H41 |
C4 |
C5 |
H51 |
304.8 |
56.6 |
H41 |
C4 |
C5 |
H52 |
184.9 |
296.6 |
H42 |
C4 |
N1 |
HN1 |
332.8 |
250.2 |
N1 |
C4 |
H42 |
C5 |
237.9 |
240.7 |
N1 |
C4 |
H42 |
H41 |
118.9 |
120.4 |
C5 |
C4 |
H42 |
H41 |
241.0 |
239.7 |
H42 |
C4 |
C5 |
C3 |
186.1 |
297.0 |
H42 |
C4 |
C5 |
H51 |
65.9 |
177.0 |
H42 |
C4 |
C5 |
H52 |
306.0 |
57.0 |
C1 |
C2 |
C3 |
C5 |
319.9 |
54.6 |
C3 |
C5 |
C4 |
H41 |
65.0 |
176.6 |
C3 |
C5 |
C4 |
H42 |
186.1 |
297.0 |
C4 |
C5 |
C3 |
H51 |
239.9 |
240.0 |
C4 |
C5 |
C3 |
H52 |
120.0 |
120.0 |
H51 |
C5 |
C3 |
H52 |
240.1 |
240.0 |
C2 |
C3 |
C5 |
H31 |
119.7 |
120.0 |
C2 |
C3 |
C5 |
H32 |
240.0 |
240.1 |
C5 |
C3 |
C2 |
H21 |
77.2 |
294.9 |
C5 |
C3 |
C2 |
H22 |
199.9 |
174.3 |
H31 |
C3 |
C5 |
H32 |
120.4 |
120.1 |
H51 |
C5 |
C4 |
H41 |
304.8 |
56.6 |
H51 |
C5 |
C4 |
H42 |
65.9 |
177.0 |
C4 |
C5 |
H51 |
C3 |
119.8 |
120.0 |
C4 |
C5 |
H51 |
H52 |
239.9 |
240.0 |
C3 |
C5 |
H51 |
H52 |
120.1 |
119.9 |
H51 |
C5 |
C3 |
C2 |
178.3 |
57.8 |
H51 |
C5 |
C3 |
H31 |
58.7 |
297.8 |
H51 |
C5 |
C3 |
H32 |
298.3 |
177.7 |
H52 |
C5 |
C4 |
H41 |
184.9 |
296.6 |
H52 |
C5 |
C4 |
H42 |
306.0 |
57.0 |
C4 |
C5 |
H52 |
C3 |
240.3 |
240.0 |
C4 |
C5 |
H52 |
H51 |
120.1 |
120.0 |
C3 |
C5 |
H52 |
H51 |
239.8 |
240.1 |
H52 |
C5 |
C3 |
C2 |
298.3 |
177.8 |
H52 |
C5 |
C3 |
H31 |
178.6 |
57.8 |
H52 |
C5 |
C3 |
H32 |
58.2 |
297.7 |
C1 |
C2 |
C3 |
H21 |
242.7 |
119.7 |
C1 |
C2 |
C3 |
H22 |
120.0 |
240.3 |
C2 |
C3 |
C5 |
H51 |
178.3 |
57.8 |
C2 |
C3 |
C5 |
H52 |
298.3 |
177.8 |
C5 |
C3 |
C2 |
H31 |
240.4 |
240.0 |
C5 |
C3 |
C2 |
H32 |
120.0 |
119.9 |
H31 |
C3 |
C2 |
H32 |
239.6 |
239.9 |
H21 |
C2 |
C3 |
H22 |
237.3 |
120.6 |
H31 |
C3 |
C5 |
H51 |
58.7 |
297.8 |
H31 |
C3 |
C5 |
H52 |
178.6 |
57.8 |
C5 |
C3 |
H31 |
C2 |
120.5 |
119.8 |
C5 |
C3 |
H31 |
H32 |
240.2 |
239.9 |
C2 |
C3 |
H31 |
H32 |
119.8 |
120.1 |
H31 |
C3 |
C2 |
H21 |
196.8 |
54.9 |
H31 |
C3 |
C2 |
H22 |
319.5 |
294.3 |
H32 |
C3 |
C5 |
H51 |
298.3 |
177.7 |
H32 |
C3 |
C5 |
H52 |
58.2 |
297.7 |
C5 |
C3 |
H32 |
C2 |
239.3 |
240.3 |
C5 |
C3 |
H32 |
H31 |
119.6 |
120.1 |
C2 |
C3 |
H32 |
H31 |
240.3 |
239.9 |
H32 |
C3 |
C2 |
H21 |
317.2 |
175.1 |
H32 |
C3 |
C2 |
H22 |
79.9 |
54.5 |
C1 |
C2 |
H21 |
C3 |
123.3 |
241.1 |
C1 |
C2 |
H21 |
H22 |
241.6 |
120.6 |
H21 |
C2 |
C3 |
H31 |
196.8 |
54.9 |
H21 |
C2 |
C3 |
H32 |
317.2 |
175.1 |
C3 |
C2 |
H21 |
H22 |
118.3 |
239.5 |
C1 |
C2 |
H22 |
C3 |
235.1 |
119.0 |
C1 |
C2 |
H22 |
H21 |
117.6 |
239.5 |
H22 |
C2 |
C3 |
H31 |
319.5 |
294.3 |
H22 |
C2 |
C3 |
H32 |
79.9 |
54.5 |
C3 |
C2 |
H22 |
H21 |
242.5 |
120.5 |