PDB Chemical Component 2HY

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 2HY

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	N1	1.361	1.338
C1	O1	1.252	1.215
C1	N2	1.337	1.348
F1	C11	1.322	1.399
N1	C4	1.366	1.367
N1	C5	1.402	1.401
C2	N2	1.464	1.472
C2	C3	1.467	1.516
C2	C13	1.527	1.507
F2	C11	1.326	1.399
O2	C20	1.219	1.217
C3	C4	1.477	1.350
C3	C20	1.496	1.415
F3	C11	1.315	1.398
N3	C19	1.167	1.136
O3	C20	1.432	1.349
O3	C21	1.416	1.428
C4	C23	1.511	1.507
C5	C6	1.401	1.388
C5	C10	1.385	1.389
C6	C7	1.407	1.381
C7	C8	1.391	1.383
C7	C11	1.511	1.507
C8	C9	1.411	1.382
C9	C10	1.386	1.382
C13	C14	1.414	1.383
C13	C18	1.403	1.384
C14	C15	1.401	1.379
C15	C16	1.397	1.396
C16	C17	1.396	1.397
C16	C19	1.292	1.432
C17	C18	1.406	1.380
C21	C22	1.506	1.531
C22	O33	1.425	1.429
C2	H2	1.100	1.090
N2	HN2	1.000	0.970
C6	H6	1.080	1.080
C8	H8	1.080	1.080
C9	H9	1.080	1.080
C10	H10	1.080	1.080
C14	H14	1.080	1.080
C15	H15	1.080	1.080
C17	H17	1.080	1.080
C18	H18	1.080	1.080
C21	H21	1.100	1.089
C21	H21A	1.100	1.090
C22	H22	1.100	1.090
C22	H22A	1.100	1.090
C23	H23	1.100	1.090
C23	H23A	1.100	1.090
C23	H23B	1.100	1.091
O33	HO33	0.950	0.967

Bond Angles for 2HY

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
N1	C1	O1	122.1	118.9
N1	C1	N2	121.5	122.1
C1	N1	C4	122.3	123.7
C1	N1	C5	118.1	118.2
O1	C1	N2	116.4	118.9
C1	N2	C2	124.0	118.5
C1	N2	HN2	118.0	120.8
F1	C11	F2	109.7	109.5
F1	C11	F3	108.9	109.5
F1	C11	C7	111.1	109.4
C4	N1	C5	119.6	118.1
N1	C4	C3	118.3	121.0
N1	C4	C23	120.3	119.5
N1	C5	C6	114.4	120.1
N1	C5	C10	125.9	120.0
N2	C2	C3	112.7	116.9
N2	C2	C13	101.8	108.0
N2	C2	H2	111.8	108.0
C2	N2	HN2	118.0	120.8
C3	C2	C13	107.7	107.6
C2	C3	C4	120.5	117.8
C2	C3	C20	112.3	121.1
C3	C2	H2	106.3	108.3
C2	C13	C14	121.3	119.8
C2	C13	C18	121.9	119.8
C13	C2	H2	116.6	107.8
F2	C11	F3	105.8	109.5
F2	C11	C7	105.9	109.5
O2	C20	C3	126.4	120.0
O2	C20	O3	122.7	120.0
C4	C3	C20	127.1	121.1
C3	C4	C23	121.4	119.5
C3	C20	O3	110.9	120.0
F3	C11	C7	115.2	109.5
N3	C19	C16	176.8	180.0
C20	O3	C21	123.8	117.0
O3	C21	C22	104.6	109.5
O3	C21	H21	111.2	109.5
O3	C21	H21A	111.1	109.5
C4	C23	H23	109.5	109.5
C4	C23	H23A	109.5	109.5
C4	C23	H23B	109.5	109.5
C6	C5	C10	119.7	119.9
C5	C6	C7	121.7	119.9
C5	C6	H6	119.2	120.0
C5	C10	C9	119.4	119.9
C5	C10	H10	120.3	120.1
C6	C7	C8	117.9	120.1
C6	C7	C11	122.5	120.0
C7	C6	H6	119.2	120.1
C8	C7	C11	119.6	120.0
C7	C8	C9	120.2	120.2
C7	C8	H8	119.9	119.9
C8	C9	C10	121.1	120.1
C9	C8	H8	119.9	120.0
C8	C9	H9	119.5	120.0
C10	C9	H9	119.5	120.0
C9	C10	H10	120.3	120.0
C14	C13	C18	116.7	120.3
C13	C14	C15	122.3	120.2
C13	C14	H14	118.8	119.9
C13	C18	C17	121.3	120.1
C13	C18	H18	119.4	119.9
C14	C15	C16	119.9	119.8
C15	C14	H14	118.9	119.9
C14	C15	H15	120.1	120.1
C15	C16	C17	118.8	119.7
C15	C16	C19	119.8	120.2
C16	C15	H15	120.0	120.1
C17	C16	C19	121.3	120.1
C16	C17	C18	121.0	119.8
C16	C17	H17	119.5	120.1
C18	C17	H17	119.5	120.1
C17	C18	H18	119.4	119.9
C21	C22	O33	106.6	109.4
C22	C21	H21	111.1	109.5
C22	C21	H21A	111.1	109.4
C21	C22	H22	110.5	109.4
C21	C22	H22A	110.5	109.5
O33	C22	H22	110.4	109.5
O33	C22	H22A	110.4	109.5
C22	O33	HO33	109.5	114.0
H21	C21	H21A	107.7	109.5
H22	C22	H22A	108.5	109.5
H23	C23	H23A	109.4	109.5
H23	C23	H23B	109.4	109.5
H23A	C23	H23B	109.5	109.4

Torsion Angles for 2HY

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O1	C1	N1	N2	180.6	180.3
N1	C1	N2	C2	5.2	0.0
N1	C1	N2	HN2	185.2	180.0
C4	N1	C1	C5	179.5	180.0
C1	N1	C4	C3	358.1	360.0
C1	N1	C4	C23	177.2	180.0
C1	N1	C5	C6	96.6	271.0
C1	N1	C5	C10	279.0	90.7
N1	C1	O1	N2	179.5	179.7
O1	C1	N1	C4	181.7	180.0
O1	C1	N1	C5	2.2	360.0
O1	C1	N2	C2	184.7	179.7
O1	C1	N2	HN2	4.7	359.7
N1	C1	N2	O1	180.5	180.3
N2	C1	N1	C4	1.2	359.7
N2	C1	N1	C5	181.6	179.7
C1	N2	C2	C3	350.3	0.5
C1	N2	C2	C13	105.4	121.9
C1	N2	C2	H2	230.5	238.1
C2	N2	C1	HN2	180.0	180.0
F2	C11	F1	F3	115.3	240.0
F2	C11	F1	C7	243.2	120.0
F3	C11	F1	C7	127.9	240.0
C6	C7	C11	F1	148.1	90.0
C8	C7	C11	F1	324.9	269.9
C4	N1	C1	O1	181.7	180.0
C4	N1	C1	N2	1.2	359.7
C1	N1	C4	C5	180.5	180.0
C4	N1	C5	C6	277.1	91.0
C4	N1	C5	C10	99.4	270.7
C2	C3	C4	N1	356.5	0.5
N1	C4	C3	C20	180.1	179.8
C3	C4	N1	C23	180.9	180.0
N1	C4	C23	H23	180.0	0.1
N1	C4	C23	H23A	300.0	120.1
N1	C4	C23	H23B	60.0	240.0
C5	N1	C1	O1	2.2	360.0
C5	N1	C1	N2	181.6	179.7
C1	N1	C5	C4	179.5	180.0
C5	N1	C4	C3	177.6	180.0
C5	N1	C4	C23	356.7	0.0
C6	C5	N1	C10	177.7	180.3
N1	C5	C6	C7	180.3	180.0
N1	C5	C6	H6	0.3	359.9
N1	C5	C10	C9	178.7	179.7
N1	C5	C10	H10	358.7	0.0
C1	N2	C2	HN2	180.0	180.0
C3	C2	N2	C13	244.9	238.6
N2	C2	C3	C4	8.6	359.3
N2	C2	C3	C20	185.5	180.0
C3	C2	N2	H2	119.8	122.3
N2	C2	C13	C14	296.2	140.0
N2	C2	C13	C18	114.3	319.7
C13	C2	N2	H2	234.8	243.7
N1	C4	C3	C2	356.5	0.5
N2	C2	C3	C13	111.5	121.6
N2	C2	C3	H2	237.1	237.8
C3	C2	N2	HN2	170.3	180.5
C3	C2	C13	C14	54.9	267.0
C3	C2	C13	C18	233.0	86.8
C13	C2	C3	H2	125.6	116.2
O2	C20	C3	C2	179.1	180.0
C4	C3	C2	C20	183.1	179.3
C2	C3	C4	C23	177.4	180.5
C2	C3	C20	O3	0.7	0.0
N2	C2	C13	C3	241.3	233.0
N2	C2	C13	H2	122.0	116.4
C13	C2	N2	HN2	285.3	301.9
C13	C2	C3	C4	257.1	237.7
C13	C2	C3	C20	74.0	58.4
C3	C2	C13	H2	240.7	243.4
C14	C13	C2	C18	181.9	180.3
C2	C13	C14	C15	177.9	180.0
C2	C13	C14	H14	357.9	360.0
C2	C13	C18	C17	181.6	179.7
C2	C13	C18	H18	1.6	360.0
F1	C11	F2	F3	242.7	120.0
F1	C11	F2	C7	120.0	240.1
F3	C11	F2	C7	237.3	120.0
C6	C7	C11	F2	267.1	330.1
C8	C7	C11	F2	83.9	150.0
C2	C3	C20	O2	179.1	180.0
C4	C3	C20	O2	355.8	0.8
C3	C20	O2	O3	181.8	180.0
O2	C20	O3	C21	332.7	360.0
C3	C4	N1	C5	177.6	180.0
N1	C4	C3	C23	179.1	180.0
C4	C3	C2	C13	257.1	237.7
C2	C3	C4	C20	176.4	180.7
C4	C3	C2	H2	131.5	121.4
O2	C20	C3	C4	355.8	0.8
C4	C3	C20	O3	177.4	180.8
C3	C4	C23	H23	359.1	180.1
C3	C4	C23	H23A	119.1	300.1
C3	C4	C23	H23B	239.1	60.0
C20	C3	C2	C13	74.0	58.4
C2	C3	C20	C4	183.3	179.2
C20	C3	C2	H2	308.4	302.2
O2	C20	C3	O3	178.4	180.0
C20	C3	C4	C23	1.0	359.8
C3	C20	O3	C21	151.1	180.0
F1	C11	F3	F2	117.8	240.0
F1	C11	F3	C7	234.4	120.0
F2	C11	F3	C7	116.6	240.0
C6	C7	C11	F3	23.6	210.0
C8	C7	C11	F3	200.4	30.0
C15	C16	C19	N3	348.5	1.8
C17	C16	C19	N3	169.8	181.8
O2	C20	O3	C3	181.5	180.0
C20	O3	C21	C22	98.4	180.0
C20	O3	C21	H21	218.4	300.0
C20	O3	C21	H21A	338.4	60.0
O3	C21	C22	O33	157.5	65.0
C22	C21	O3	H21	240.0	240.0
C22	C21	O3	H21A	120.0	120.0
O3	C21	C22	H22	277.5	185.0
O3	C21	C22	H22A	37.5	305.0
H21	C21	O3	H21A	240.0	240.0
C23	C4	N1	C5	356.7	0.0
N1	C4	C23	C3	180.9	180.0
C23	C4	C3	C20	1.0	359.8
H23	C23	C4	H23A	240.0	240.0
H23	C23	C4	H23B	120.0	120.1
H23A	C23	C4	H23B	240.0	240.1
N1	C5	C6	C10	182.2	179.7
C6	C5	C10	C9	1.2	359.4
C6	C5	C10	H10	181.2	179.7
C5	C6	C7	C8	1.5	0.0
C5	C6	C7	C11	178.4	180.0
C7	C6	C5	H6	180.0	180.0
N1	C5	C10	C6	177.6	180.3
C10	C5	C6	C7	358.1	0.3
C10	C5	C6	H6	178.1	180.2
C8	C9	C10	C5	359.9	0.6
C5	C10	C9	H9	179.9	180.3
C9	C10	C5	H10	180.0	179.7
F1	C11	C7	C6	148.1	90.0
F2	C11	C7	C6	267.1	330.1
F3	C11	C7	C6	23.6	210.0
C7	C6	C5	C10	358.1	0.3
C5	C6	C7	H6	180.0	180.0
C8	C7	C6	C11	183.1	180.1
C6	C7	C8	C9	359.5	360.0
C6	C7	C8	H8	179.5	179.9
F1	C11	C7	C8	324.9	269.9
F2	C11	C7	C8	83.9	150.0
F3	C11	C7	C8	200.4	30.0
C6	C7	C8	C11	177.0	179.9
C8	C7	C6	H6	181.5	180.1
C7	C8	C9	C10	359.8	359.7
C9	C8	C7	H8	180.0	180.0
C7	C8	C9	H9	179.8	180.0
F1	C11	C7	F2	241.0	119.9
F1	C11	C7	F3	124.5	240.0
F2	C11	C7	F3	243.5	120.0
C6	C7	C11	C8	183.2	180.1
C11	C7	C6	H6	358.4	0.0
C11	C7	C8	C9	182.6	180.0
C11	C7	C8	H8	2.6	0.0
C5	C10	C9	C8	359.9	0.6
C9	C8	C7	C11	182.6	180.0
C7	C8	C9	H8	180.0	180.0
C10	C9	C8	H9	180.0	179.8
C8	C9	C10	H10	179.8	180.3
C5	C10	C9	H10	180.0	180.3
C10	C9	C8	H8	179.8	179.7
C8	C9	C10	H9	180.0	180.2
C2	C13	C14	C18	178.2	179.7
C14	C13	C2	H2	174.2	23.6
C14	C13	C18	C17	359.9	359.4
C14	C13	C18	H18	179.8	179.7
C13	C14	C15	C16	0.8	360.0
C15	C14	C13	H14	180.0	180.1
C13	C14	C15	H15	180.8	179.9
C2	C13	C18	C14	181.8	180.3
C18	C13	C2	H2	352.3	203.4
C18	C13	C14	C15	359.7	0.3
C18	C13	C14	H14	179.7	180.3
C16	C17	C18	C13	0.1	0.5
C13	C18	C17	H17	180.1	180.3
C17	C18	C13	H18	180.0	179.7
C15	C14	C13	C18	359.7	0.3
C13	C14	C15	H14	180.0	179.9
C14	C15	C16	C17	359.1	360.0
C14	C15	C16	C19	180.4	180.0
C16	C15	C14	H15	180.0	180.1
N3	C19	C16	C15	348.5	1.8
C16	C15	C14	H14	180.9	180.0
C14	C15	C16	H15	180.0	179.9
C17	C16	C15	C19	178.7	180.0
C15	C16	C17	C18	0.4	359.8
C15	C16	C17	H17	180.4	180.0
N3	C19	C16	C17	169.8	181.8
C13	C18	C17	C16	0.1	0.5
C15	C16	C17	C19	181.3	180.0
C17	C16	C15	H15	179.2	180.0
C18	C17	C16	H17	180.0	179.8
C16	C17	C18	H18	180.1	180.3
C15	C16	C19	C17	178.7	180.0
C19	C16	C15	H15	0.4	0.1
C19	C16	C17	C18	179.1	179.8
C19	C16	C17	H17	359.1	359.9
C13	C18	C17	H18	180.0	180.3
C18	C17	C16	C19	179.1	179.8
C16	C17	C18	H17	180.0	180.2
O3	C21	C22	H21	120.0	120.0
O3	C21	C22	H21A	240.0	240.0
O33	C22	C21	H22	240.0	240.0
O33	C22	C21	H22A	120.0	120.0
C21	C22	O33	HO33	180.0	180.0
H21	C21	C22	H21A	120.0	120.0
H22	C22	C21	H22A	240.0	240.0
O33	C22	C21	H21	37.5	305.0
O33	C22	C21	H21A	277.5	185.0
C21	C22	O33	H22	120.0	120.0
C21	C22	O33	H22A	240.0	240.0
H22	C22	O33	H22A	120.0	120.1
N2	C2	H2	C3	123.5	127.5
N2	C2	H2	C13	243.5	243.6
H2	C2	N2	HN2	50.5	58.2
C3	C2	H2	C13	120.0	116.1
H2	C2	C3	C4	131.5	121.4
H2	C2	C3	C20	308.4	302.2
H2	C2	C13	C14	174.2	23.6
H2	C2	C13	C18	352.3	203.4
C1	N2	HN2	C2	180.0	180.0
HN2	N2	C2	C3	170.3	180.5
HN2	N2	C2	C13	285.3	301.9
HN2	N2	C2	H2	50.5	58.2
H6	C6	C5	C10	178.1	180.2
C5	C6	H6	C7	180.0	180.0
H6	C6	C7	C8	181.5	180.1
H6	C6	C7	C11	358.4	0.0
H8	C8	C7	C11	2.6	0.0
C7	C8	H8	C9	180.0	180.0
H8	C8	C9	C10	179.8	179.7
H8	C8	C9	H9	359.8	360.0
C8	C9	H9	C10	180.0	179.8
H9	C9	C8	H8	359.8	360.0
H9	C9	C10	H10	359.9	0.1
C5	C10	H10	C9	180.0	179.7
H10	C10	C9	H9	359.9	0.1
H14	C14	C13	C18	179.7	180.3
C13	C14	H14	C15	180.0	180.1
H14	C14	C15	C16	180.9	180.0
H14	C14	C15	H15	0.8	360.0
C14	C15	H15	C16	180.0	180.1
H15	C15	C14	H14	0.8	360.0
H15	C15	C16	C17	179.2	180.0
H15	C15	C16	C19	0.4	0.1
H17	C17	C16	C19	359.1	359.9
C16	C17	H17	C18	180.0	179.8
H17	C17	C18	H18	0.1	0.1
C13	C18	H18	C17	180.0	179.7
H18	C18	C17	H17	0.1	0.1
O3	C21	H21	C22	244.0	240.0
O3	C21	H21	H21A	122.0	120.0
H21	C21	C22	O33	37.5	305.0
C22	C21	H21	H21A	238.0	240.1
H21	C21	C22	H22	157.5	65.0
H21	C21	C22	H22A	277.5	185.0
O3	C21	H21A	C22	116.0	120.0
O3	C21	H21A	H21	238.0	239.9
H21A	C21	C22	O33	277.5	185.0
C22	C21	H21A	H21	122.0	120.0
H21A	C21	C22	H22	37.5	305.0
H21A	C21	C22	H22A	157.5	65.0
C21	C22	H22	O33	242.4	240.1
H22	C22	C21	H21	157.5	65.0
H22	C22	C21	H21A	37.5	305.0
C21	C22	H22	H22A	121.2	120.0
O33	C22	H22	H22A	238.8	239.9
H22	C22	O33	HO33	60.0	60.1
C21	C22	H22A	O33	117.6	120.0
H22A	C22	C21	H21	277.5	185.0
H22A	C22	C21	H21A	157.5	65.0
C21	C22	H22A	H22	238.8	240.0
O33	C22	H22A	H22	121.2	120.1
H22A	C22	O33	HO33	300.0	300.0
C4	C23	H23	H23A	120.0	120.0
C4	C23	H23	H23B	240.0	240.0
H23A	C23	H23	H23B	120.0	119.9
C4	C23	H23A	H23	240.0	240.0
C4	C23	H23A	H23B	120.0	120.0
H23	C23	H23A	H23B	240.1	240.0
C4	C23	H23B	H23	120.0	120.0
C4	C23	H23B	H23A	240.0	240.0
H23	C23	H23B	H23A	119.9	120.0
HO33	O33	C22	H22	60.0	60.1
HO33	O33	C22	H22A	300.0	300.0