PDB Chemical Component 2GW

Ideal Model

Chemical Description

Name 5-phenyl-uridine-5'-alpha-d-galactosyl-diphosphate
Formula C21 H28 N2 O17 P2
Formal charge 0
Molecular weight 642.398 g/mol
Component type NON-POLYMER

Chemical features

Atom count 70
Chiral atom count 9
Chiral atoms C1' C2' C3' C4' C1 C5 C4 C3 C2
Bond count 73
Aromatic bond count 6

Chemical Identifiers

Systematic name (ACDLabs) [(2R,3S,4R,5R)-5-(2,4-dioxo-5-phenyl-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl (2R,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl dihydrogen diphosphate (non-preferred name)
Systematic name (OpenEye OEToolkits) [[(2R,3S,4R,5R)-5-[2,4-bis(oxidanylidene)-5-phenyl-pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2R,3R,4S,5R,6R)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl] hydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) OC[C@H]1O[C@H](O[P](O)(=O)O[P](O)(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)N3C=C(C(=O)NC3=O)c4ccccc4)[C@H](O)[C@@H](O)[C@H]1O
SMILES (CACTVS) OC[CH]1O[CH](O[P](O)(=O)O[P](O)(=O)OC[CH]2O[CH]([CH](O)[CH]2O)N3C=C(C(=O)NC3=O)c4ccccc4)[CH](O)[CH](O)[CH]1O
Stereo SMILES (OpenEye) c1ccc(cc1)C2=CN(C(=O)NC2=O)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)OP(=O)(O)O[C@@H]4[C@@H]([C@H]([C@H]([C@H](O4)CO)O)O)O)O)O
InChI descriptor InChI=1S/C21H28N2O17P2/c24-7-11-13(25)15(27)17(29)20(38-11)39-42(34,35)40-41(32,33)36-8-12-14(26)16(28)19(37-12)23-6-10(18(30)22-21(23)31)9-4-2-1-3-5-9/h1-6,11-17,19-20,24-29H,7-8H2,(H,32,33)(H,34,35)(H,22,30,31)/t11-,12-,13+,14-,15+,16-,17-,19-,20-/m1/s1
InChIKey descriptor MBQWFWCBPKCMTC-ATMROTIPSA-N

Status Information

Last modified 2013-01-18
Created 2012-01-04
Release status REL
Model PDB code 3V0L
Processing site RCSB