PDB Chemical Component 2GW

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 2GW

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
CAO CAM 1.395 1.383
CAO CAQ 1.405 1.380
CAM CAN 1.398 1.383
CAQ CBA 1.385 1.394
CAN CAP 1.398 1.381
OAA CBC 1.403 1.218
CBA CAP 1.369 1.394
CBA CBB 1.566 1.483
CBC CBB 1.423 1.468
CBC NAU 1.352 1.349
CBB CAR 1.400 1.364
NAU CBD 1.367 1.345
CAR NBN 1.400 1.366
OAC PBO 1.519 1.480
CBD NBN 1.331 1.343
CBD OAB 1.231 1.217
O6 C6 1.364 1.429
NBN C1' 1.492 1.465
OAZ PBO 1.615 1.610
OAZ PBP 1.588 1.610
C6 C5 1.535 1.530
OAD PBP 1.502 1.480
O5' PBO 1.533 1.610
O5' C5' 1.426 1.429
PBO OAK 1.475 1.610
PBP O1 1.611 1.610
PBP OAL 1.470 1.610
C5 O5 1.383 1.429
C5 C4 1.538 1.531
O4' C1' 1.467 1.444
O4' C4' 1.450 1.437
O5 C1 1.467 1.429
C1' C2' 1.480 1.549
C5' C4' 1.515 1.530
O1 C1 1.341 1.429
C4' C3' 1.504 1.540
C3' C2' 1.474 1.549
C3' O3' 1.399 1.429
C2' O2' 1.417 1.429
C1 C2 1.504 1.532
C4 O4 1.432 1.429
C4 C3 1.517 1.533
C3 C2 1.421 1.531
C3 O3 1.473 1.429
C2 O2 1.442 1.429
CAP H1 1.080 1.079
CAN H2 1.080 1.081
CAM H3 1.080 1.080
CAO H4 1.080 1.081
CAQ H5 1.079 1.080
CAR H6 1.080 1.079
NAU H7 1.000 0.970
C1' H8 1.100 1.089
C2' H9 1.100 1.090
O2' H10 0.950 0.967
C3' H11 1.100 1.090
O3' H12 0.950 0.967
C4' H13 1.100 1.090
C5' H14 1.100 1.091
C5' H15 1.100 1.090
OAK H16 0.950 0.966
OAL H17 0.950 0.967
C1 H18 1.100 1.090
C5 H19 1.100 1.091
C6 H20 1.100 1.091
C6 H21 1.100 1.090
O6 H22 0.950 0.966
C4 H23 1.100 1.090
O4 H24 0.950 0.968
C3 H25 1.100 1.090
O3 H26 0.950 0.967
C2 H27 1.100 1.090
O2 H28 0.950 0.967

Bond Angles for 2GW

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
CAO CAM H3 119.7 119.9
CAO CAQ CBA 118.0 119.9
CAQ CAO H4 119.8 119.9
CAO CAQ H5 121.0 120.1
CAM CAN H2 121.0 120.0
CAQ CBA CBB 117.8 120.1
CBA CAQ H5 121.0 120.0
CAN CAP H1 119.4 120.1
OAA CBC NAU 113.4 120.7
CBA CAP H1 119.4 120.1
CBA CBB CAR 120.8 120.8
CBC NAU CBD 117.2 120.3
CBC NAU H7 121.4 119.8
CBB CAR NBN 117.0 119.5
CBB CAR H6 121.5 120.3
NAU CBD NBN 122.9 121.9
NAU CBD OAB 117.7 119.1
CBD NAU H7 121.4 119.9
CAR NBN CBD 122.0 121.3
CAR NBN C1' 120.3 119.3
NBN CAR H6 121.5 120.3
OAB CBD NBN 119.2 119.0
CBD NBN C1' 117.7 119.4
O6 C6 H20 108.2 109.4
O6 C6 H21 108.1 109.5
NBN C1' C2' 113.7 110.6
NBN C1' H8 109.9 110.5
OAZ PBP O1 96.7 109.5
OAZ PBP OAL 119.1 109.5
C6 C5 C4 117.3 109.5
C6 C5 H19 108.1 109.5
OAD PBP O1 105.8 109.5
O5' PBO OAK 109.6 109.5
O5' C5' H14 108.2 109.4
O5' C5' H15 108.2 109.5
PBO OAK H16 109.5 114.0
OAL PBP O1 112.3 109.5
PBP O1 C1 127.3 123.0
PBP OAL H17 109.5 114.0
C5 C4 O4 113.3 109.5
C5 C4 C3 110.9 109.2
C4 C5 H19 108.1 109.5
C5 C4 H23 107.1 109.5
O4' C1' C2' 107.0 103.5
O4' C1' H8 110.3 110.8
O4' C4' C3' 102.1 107.3
O4' C4' H13 110.1 109.9
O5 C1 C2 108.0 109.4
O5 C1 H18 110.1 109.5
C1' C2' O2' 107.6 110.9
C2' C1' H8 110.1 110.7
C1' C2' H9 110.9 110.9
C5' C4' H13 109.3 110.0
O1 C1 C2 111.0 109.4
O1 C1 H18 112.1 109.5
C4' C3' H11 108.3 110.6
C3' C2' H9 111.0 110.9
O3' C3' H11 109.7 110.4
C3' O3' H12 109.5 114.0
O2' C2' H9 111.9 110.8
C2' O2' H10 109.5 114.0
C1 C2 C3 111.5 109.2
C1 C2 O2 106.2 109.5
C2 C1 H18 109.6 109.4
C1 C2 H27 107.6 109.5
O4 C4 C3 109.5 109.5
O4 C4 H23 108.4 109.5
C4 O4 H24 109.5 114.0
C4 C3 C2 106.8 109.0
C4 C3 O3 112.2 109.5
C3 C4 H23 107.4 109.6
C4 C3 H25 108.5 109.5
O3 C3 C2 110.3 109.6
C3 C2 O2 114.5 109.5
C2 C3 H25 109.9 109.6
C3 C2 H27 108.6 109.5
O3 C3 H25 109.1 109.6
C3 O3 H26 109.5 114.0
O2 C2 H27 108.3 109.6
C2 O2 H28 109.5 114.0
H14 C5' H15 109.5 109.4
H20 C6 H21 109.4 109.4

Torsion Angles for 2GW

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
CAO CAM CAN H2 179.2 180.0
CAQ CAO CAM H3 180.1 180.0
CAO CAQ CBA CBB 180.9 180.0
CBA CAQ CAO H5 180.0 179.7
CAM CAN CAP H1 182.3 180.0
CBA CAQ CAO H4 179.0 179.7
CAO CAQ CBA H5 180.0 180.3
CAQ CBA CAP H1 176.7 179.7
CAQ CBA CBB CAR 235.2 115.0
CBA CAP CAN H1 180.0 180.2
OAA CBC NAU CBD 180.3 180.0
OAA CBC NAU H7 0.3 0.1
CAN CAP CBA H1 180.0 179.8
CBB CBA CAQ H5 0.9 359.7
CBB CBA CAP H1 358.4 0.3
CBA CBB CAR NBN 177.9 180.0
CBA CBB CAR H6 357.9 359.9
CBC CBB CAR NBN 358.6 0.2
CBC CBB CAR H6 178.6 180.2
CBC NAU CBD NBN 0.0 0.3
CBC NAU CBD OAB 174.6 180.0
CBD NAU CBC H7 180.0 179.9
CBB CAR NBN CBD 3.2 360.0
CBB CAR NBN C1' 181.1 180.0
NBN CAR CBB H6 180.0 180.0
CBC NAU CBD H7 180.0 180.1
CAR NBN CBD NAU 357.4 359.7
OAB CBD NAU NBN 174.5 179.7
NAU CBD NBN C1' 179.4 179.7
CBB CAR NBN H6 180.0 180.0
NAU CBD NBN CAR 357.4 359.7
OAB CBD NBN CAR 182.9 180.0
CBD NBN CAR C1' 182.1 180.0
CAR NBN C1' C2' 257.0 115.0
CAR NBN C1' H8 133.1 352.0
OAC PBO OAK H16 360.0 180.1
NAU CBD NBN OAB 174.5 179.7
NBN CBD NAU H7 180.1 180.2
CAR NBN CBD C1' 178.0 180.0
CBD NBN CAR H6 183.2 180.0
CBD NBN C1' C2' 75.0 295.0
CBD NBN C1' H8 311.1 172.1
NAU CBD OAB NBN 185.3 180.3
OAB CBD NAU H7 354.6 359.9
CAR NBN CBD OAB 182.9 180.0
OAB CBD NBN C1' 5.0 360.0
O6 C6 C5 C4 302.8 185.0
O6 C6 C5 H19 65.2 305.0
H20 C6 O6 H21 241.6 119.9
CAR NBN C1' CBD 182.0 180.0
C1' NBN CAR H6 1.1 0.0
O4' C1' NBN C2' 117.0 114.0
O4' C1' NBN H8 241.0 237.0
NBN C1' C2' O2' 211.0 273.7
C2' C1' NBN H8 124.0 122.9
NBN C1' C2' H9 333.7 37.3
OAZ PBO OAK H16 240.7 60.1
OAD PBP OAZ O1 251.1 240.0
OAL PBP OAZ O1 120.1 120.0
OAZ PBP O1 C1 195.1 185.1
OAZ PBP OAL H17 128.0 300.0
C6 C5 C4 O4 315.9 302.3
C6 C5 C4 C3 192.4 182.4
C4 C5 C6 H19 237.6 239.9
C6 C5 C4 H23 75.5 62.5
OAZ PBP OAD O1 102.4 120.0
OAL PBP OAD O1 236.3 240.0
OAD PBP O1 C1 305.2 305.0
OAD PBP OAL H17 0.0 180.0
PBO O5' C5' H14 13.1 60.0
PBO O5' C5' H15 131.7 300.1
O5' PBO OAK H16 122.8 300.1
O5' C5' C4' H13 163.0 305.4
H14 C5' O5' H15 241.4 120.0
OAZ PBP O1 OAL 125.3 120.0
O1 PBP OAL H17 239.9 60.0
PBP O1 C1 C2 230.2 210.0
PBP O1 C1 H18 353.2 329.9
OAZ PBP OAL O1 248.2 240.0
OAD PBP OAL O1 120.2 120.0
OAL PBP O1 C1 69.9 65.0
C5 O5 C1 C2 303.1 298.9
C5 O5 C1 H18 183.4 178.9
C6 C5 C4 H19 122.4 120.0
O4 C4 C5 C3 123.6 119.9
O4 C4 C5 H23 240.4 239.9
C5 C4 O4 H24 180.0 180.0
C5 C4 C3 C2 55.6 57.0
C5 C4 C3 O3 176.6 176.9
C3 C4 C5 H23 116.9 120.0
C5 C4 C3 H25 297.2 297.1
NBN C1' O4' C2' 238.6 241.5
NBN C1' O4' H8 118.8 122.9
O4' C1' C2' O2' 94.7 155.2
C2' C1' O4' H8 240.2 241.4
O4' C1' C2' H9 217.4 278.8
C4' O4' C1' C2' 1.0 319.9
C4' O4' C1' H8 120.8 78.5
C5' C4' O4' H13 239.9 238.9
O4' C4' C3' H11 78.2 116.7
O1 C1 O5 C2 119.0 119.9
O1 C1 O5 H18 238.7 239.9
O5 C1 C2 C3 63.3 57.6
O5 C1 C2 O2 188.5 177.5
C2 C1 O5 H18 119.7 119.9
O5 C1 C2 H27 304.3 297.7
NBN C1' C2' H8 236.1 237.1
O4' C1' C2' H8 119.9 118.7
C3' C2' C1' H9 118.3 118.2
O2' C2' C1' H9 237.3 236.4
C1' C2' O2' H10 180.0 180.0
O4' C4' C5' H13 120.7 121.1
C5' C4' C3' H11 319.2 357.3
O5 C1 O1 C2 243.0 240.1
O5 C1 O1 H18 120.0 120.1
O1 C1 C2 C3 307.7 297.6
O1 C1 C2 O2 72.9 57.5
C2 C1 O1 H18 237.0 240.0
O1 C1 C2 H27 188.7 177.7
O4' C4' C3' H13 243.3 240.5
C4' C3' C2' H9 156.4 97.3
O3' C3' C4' H11 124.3 122.6
C4' C3' O3' H12 180.0 176.3
O4' C4' C3' C2' 322.4 357.9
C3' C2' C1' H8 215.9 278.4
C1' C2' C3' H9 241.7 241.8
O2' C2' C3' H9 126.5 123.5
C3' C2' O2' H10 291.9 292.7
O4' C4' C3' O3' 202.6 239.3
C4' C3' O3' H11 236.4 237.2
O3' C3' C2' H9 281.6 216.1
O2' C2' C1' H8 334.8 36.6
C1' C2' O2' H9 122.1 123.7
C3' C2' O2' H9 234.0 236.4
O5 C1 C2 H18 240.0 240.0
O1 C1 C2 H18 124.4 120.0
C4 C3 C2 C1 297.2 303.0
O3 C3 C2 C1 175.0 183.2
C3 C2 C1 O2 234.7 240.1
C1 C2 C3 H25 54.7 62.9
C3 C2 C1 H27 118.9 119.9
O2 C2 C1 H27 244.2 239.8
C1 C2 O2 H28 180.0 60.0
C5 C4 O4 C3 235.7 240.3
O4 C4 C5 H19 193.5 182.3
C5 C4 O4 H23 118.8 120.1
O4 C4 C3 C2 289.8 297.1
O4 C4 C3 O3 50.8 57.0
C3 C4 O4 H23 243.2 239.8
O4 C4 C3 H25 171.5 177.2
C5 C4 C3 O4 125.8 119.9
C3 C4 C5 H19 69.9 62.4
C5 C4 C3 H23 243.3 240.1
C1 C2 C3 C4 297.2 303.0
O4 C4 C3 H23 117.5 120.2
C3 C4 O4 H24 304.3 299.7
O3 C3 C4 C2 121.0 119.9
C4 C3 C2 O2 176.7 183.1
C2 C3 C4 H25 118.4 119.9
C4 C3 C2 H27 55.5 62.9
O3 C3 C4 H25 239.4 239.8
C4 C3 O3 H26 180.0 180.0
C1 C2 C3 O2 120.5 119.9
C3 C2 C1 H18 183.2 177.6
C1 C2 C3 H27 241.7 240.1
C4 C3 C2 O3 122.2 119.9
C2 C3 C4 H23 172.3 176.9
C4 C3 C2 H25 242.5 240.1
O3 C3 C2 H25 120.3 120.3
C2 C3 O3 H26 298.9 299.5
O2 C2 C3 H27 121.2 120.2
C3 C2 O2 H28 303.4 179.7
C1 C2 C3 O3 175.0 183.2
C4 C3 O3 C2 241.1 240.4
O3 C3 C4 H23 293.3 296.8
C4 C3 O3 H25 120.3 120.2
O3 C3 C2 O2 54.5 63.3
C2 C3 O3 H25 239.2 239.7
O3 C3 C2 H27 293.3 303.0
C1 C2 O2 C3 236.6 240.3
O2 C2 C1 H18 308.5 297.5
C1 C2 O2 H27 115.3 120.1
O2 C2 C3 H25 294.2 303.0
C3 C2 O2 H27 238.7 239.8
H2 CAN CAP H1 2.3 0.0
H3 CAM CAN H2 359.3 360.0
H4 CAO CAM H3 0.1 360.0
H4 CAO CAQ CBA 179.0 179.7
H4 CAO CAQ H5 359.0 360.0
CAO CAQ H5 CBA 180.0 179.7
H5 CAQ CAO H4 359.0 360.0
H5 CAQ CBA CBB 0.9 359.7
CBB CAR H6 NBN 180.0 180.0
H6 CAR NBN CBD 183.2 180.0
H6 CAR NBN C1' 1.1 0.0
CBC NAU H7 CBD 180.0 179.9
H7 NAU CBD NBN 180.1 180.2
H7 NAU CBD OAB 354.6 359.9
NBN C1' H8 C2' 126.0 122.9
O4' C1' H8 C2' 242.1 245.8
H8 C1' C2' O2' 334.8 36.6
H8 C1' C2' H9 97.6 160.1
C1' C2' H9 O2' 239.8 236.3
H9 C2' C1' H8 97.6 160.1
H9 C2' O2' H10 57.9 56.3
H10 O2' C2' H9 57.9 56.3
H11 C3' C2' H9 40.8 338.5
H11 C3' O3' H12 303.6 299.0
H12 O3' C3' H11 303.6 299.0
O4' C4' H13 C3' 111.5 117.9
H13 C4' C3' H11 194.9 236.1
O5' C5' H14 H15 117.8 240.0
H14 C5' C4' H13 42.4 65.4
O5' C5' H15 H14 242.2 120.0
H15 C5' C4' H13 283.7 185.3
H17 OAL PBP O1 239.9 60.0
O5 C1 H18 C2 118.7 119.9
O1 C1 H18 C2 236.2 240.0
H18 C1 C2 C3 183.2 177.6
H18 C1 C2 O2 308.5 297.5
H18 C1 C2 H27 64.3 57.7
C6 C5 H19 C4 232.1 239.9
H19 C5 C4 O4 193.5 182.3
H19 C5 C4 C3 69.9 62.4
H19 C5 C4 H23 313.1 302.4
O6 C6 H20 H21 117.6 240.0
H20 C6 C5 C4 182.0 304.9
H20 C6 C5 H19 304.4 65.0
O6 C6 H21 H20 242.4 119.9
H21 C6 C5 C4 63.6 64.9
H21 C6 C5 H19 186.0 185.0
H22 O6 C6 H20 300.8 60.0
H22 O6 C6 H21 59.2 300.0
C5 C4 H23 O4 237.3 239.9
C5 C4 H23 C3 119.1 119.7
H23 C4 C5 H19 313.1 302.4
O4 C4 H23 C3 241.8 239.8
H23 C4 O4 H24 61.2 59.9
H23 C4 C3 C2 172.3 176.9
H23 C4 C3 O3 293.3 296.8
H23 C4 C3 H25 54.0 57.0
H24 O4 C4 C3 304.3 299.7
H24 O4 C4 H23 61.2 59.9
C4 C3 H25 C2 116.4 119.6
C4 C3 H25 O3 237.4 239.8
H25 C3 C4 H23 54.0 57.0
O3 C3 H25 C2 239.0 239.7
H25 C3 C2 O2 294.2 303.0
H25 C3 C2 H27 173.0 182.8
H25 C3 O3 H26 59.7 59.8
H26 O3 C3 C2 298.9 299.5
H26 O3 C3 H25 59.7 59.8
C1 C2 H27 C3 120.8 119.7
C1 C2 H27 O2 245.6 239.9
H27 C2 C1 H18 64.3 57.7
C3 C2 H27 O2 124.9 120.2
H27 C2 C3 H25 173.0 182.8
H27 C2 O2 H28 64.7 299.9
H28 O2 C2 H27 64.7 299.9