PDB Chemical Component 2GQ
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 2GQ
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C10 |
C9 |
1.475 |
1.551 |
C10 |
C11 |
1.421 |
1.552 |
C9 |
N1 |
1.424 |
1.475 |
C11 |
C12 |
1.500 |
1.544 |
N1 |
C12 |
1.455 |
1.471 |
N1 |
C7 |
1.284 |
1.382 |
N |
C7 |
1.362 |
1.369 |
N |
C8 |
1.377 |
1.349 |
C7 |
C6 |
1.344 |
1.355 |
O |
C8 |
1.236 |
1.218 |
C8 |
C3 |
1.478 |
1.465 |
C6 |
C4 |
1.431 |
1.416 |
C3 |
C4 |
1.419 |
1.415 |
C3 |
C2 |
1.401 |
1.396 |
C4 |
C5 |
1.405 |
1.400 |
C2 |
C1 |
1.388 |
1.366 |
C5 |
C |
1.382 |
1.366 |
C1 |
C |
1.384 |
1.390 |
C2 |
H1 |
1.080 |
1.080 |
C1 |
H2 |
1.080 |
1.080 |
C6 |
H3 |
1.080 |
1.080 |
C5 |
H5 |
1.080 |
1.079 |
C |
H6 |
1.079 |
1.081 |
C12 |
H7 |
1.100 |
1.090 |
C12 |
H8 |
1.100 |
1.090 |
C11 |
H9 |
1.101 |
1.090 |
C11 |
H10 |
1.100 |
1.089 |
C10 |
H11 |
1.100 |
1.089 |
C10 |
H12 |
1.100 |
1.090 |
C9 |
H13 |
1.100 |
1.090 |
C9 |
H14 |
1.100 |
1.090 |
N |
H15 |
1.000 |
0.970 |
Bond Angles for 2GQ
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C9 |
C10 |
H11 |
110.5 |
111.1 |
C9 |
C10 |
H12 |
110.5 |
111.0 |
C10 |
C9 |
H13 |
111.8 |
110.4 |
C10 |
C9 |
H14 |
111.8 |
110.3 |
C10 |
C11 |
H9 |
111.2 |
110.7 |
C10 |
C11 |
H10 |
111.2 |
110.9 |
C11 |
C12 |
H7 |
111.0 |
109.9 |
C11 |
C12 |
H8 |
111.0 |
110.0 |
N1 |
C12 |
H7 |
110.9 |
109.9 |
N1 |
C12 |
H8 |
111.0 |
109.8 |
N |
C7 |
C6 |
125.2 |
122.3 |
C7 |
N |
H15 |
119.0 |
119.3 |
C7 |
C6 |
C4 |
117.4 |
120.0 |
C7 |
C6 |
H3 |
121.3 |
120.0 |
O |
C8 |
C3 |
124.4 |
120.5 |
C8 |
C3 |
C4 |
120.8 |
118.5 |
C8 |
C3 |
C2 |
120.4 |
121.9 |
C3 |
C4 |
C6 |
119.0 |
118.8 |
C6 |
C4 |
C5 |
121.6 |
121.7 |
C4 |
C6 |
H3 |
121.3 |
120.0 |
C2 |
C3 |
C4 |
118.8 |
119.6 |
C3 |
C4 |
C5 |
119.4 |
119.5 |
C3 |
C2 |
C1 |
120.7 |
119.6 |
C3 |
C2 |
H1 |
119.7 |
120.2 |
C4 |
C5 |
C |
120.5 |
119.5 |
C4 |
C5 |
H5 |
119.7 |
120.2 |
C2 |
C1 |
C |
120.4 |
120.9 |
C1 |
C2 |
H1 |
119.7 |
120.2 |
C2 |
C1 |
H2 |
119.8 |
119.6 |
C1 |
C |
C5 |
120.3 |
121.0 |
C |
C5 |
H5 |
119.8 |
120.3 |
C5 |
C |
H6 |
119.8 |
119.5 |
C |
C1 |
H2 |
119.8 |
119.5 |
C1 |
C |
H6 |
119.9 |
119.6 |
H7 |
C12 |
H8 |
109.4 |
109.9 |
H9 |
C11 |
H10 |
109.5 |
110.7 |
H11 |
C10 |
H12 |
109.5 |
111.0 |
H13 |
C9 |
H14 |
109.5 |
110.5 |
Torsion Angles for 2GQ
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C9 |
C10 |
C11 |
H9 |
77.9 |
206.0 |
C9 |
C10 |
C11 |
H10 |
200.1 |
82.7 |
H11 |
C10 |
C9 |
H12 |
238.7 |
123.9 |
H13 |
C9 |
C10 |
H14 |
236.9 |
122.4 |
C10 |
C11 |
C12 |
H7 |
142.8 |
262.8 |
C10 |
C11 |
C12 |
H8 |
264.7 |
141.7 |
H9 |
C11 |
C10 |
H10 |
237.7 |
123.3 |
C9 |
N1 |
C12 |
H7 |
243.0 |
120.7 |
C9 |
N1 |
C12 |
H8 |
121.1 |
241.7 |
N1 |
C12 |
C11 |
H7 |
241.0 |
119.4 |
N1 |
C12 |
C11 |
H8 |
119.1 |
240.5 |
H7 |
C12 |
C11 |
H8 |
238.1 |
121.1 |
C11 |
C12 |
N1 |
H7 |
119.1 |
240.6 |
C11 |
C12 |
N1 |
H8 |
240.9 |
119.6 |
H7 |
C12 |
N1 |
H8 |
121.9 |
239.0 |
N1 |
C7 |
N |
H15 |
0.8 |
359.9 |
N1 |
C7 |
C6 |
H3 |
359.5 |
0.0 |
N |
C7 |
C6 |
C4 |
0.3 |
0.3 |
N |
C7 |
C6 |
H3 |
180.3 |
180.0 |
N |
C8 |
C3 |
C4 |
358.3 |
0.3 |
C6 |
C7 |
N |
H15 |
180.0 |
180.0 |
C3 |
C4 |
C6 |
C7 |
358.7 |
359.8 |
C7 |
C6 |
C4 |
C5 |
177.7 |
179.8 |
C4 |
C6 |
C7 |
H3 |
180.0 |
180.3 |
O |
C8 |
C3 |
C4 |
176.0 |
180.0 |
O |
C8 |
C3 |
C2 |
357.3 |
0.0 |
C8 |
C3 |
C4 |
C6 |
2.0 |
360.0 |
C2 |
C3 |
C8 |
C4 |
181.4 |
180.0 |
C8 |
C3 |
C4 |
C5 |
183.0 |
180.0 |
C8 |
C3 |
C2 |
C1 |
177.0 |
180.0 |
C8 |
C3 |
C2 |
H1 |
357.0 |
360.0 |
C7 |
C6 |
C4 |
H3 |
180.0 |
179.7 |
C2 |
C3 |
C4 |
C6 |
180.7 |
180.0 |
C3 |
C4 |
C6 |
C5 |
181.0 |
180.0 |
C6 |
C4 |
C5 |
C |
180.2 |
180.0 |
C6 |
C4 |
C5 |
H5 |
0.3 |
0.0 |
C7 |
C6 |
C4 |
C3 |
358.7 |
359.8 |
C8 |
C3 |
C4 |
C2 |
181.3 |
180.0 |
C6 |
C4 |
C3 |
C5 |
179.0 |
180.0 |
C3 |
C4 |
C6 |
H3 |
178.7 |
180.1 |
C4 |
C3 |
C2 |
C1 |
358.3 |
0.0 |
C4 |
C3 |
C2 |
H1 |
178.3 |
180.0 |
C3 |
C4 |
C5 |
C |
359.3 |
360.0 |
C3 |
C4 |
C5 |
H5 |
179.3 |
180.0 |
C8 |
C3 |
C2 |
C4 |
178.7 |
180.0 |
C2 |
C3 |
C4 |
C5 |
1.7 |
360.0 |
C3 |
C2 |
C1 |
C |
0.7 |
0.0 |
C1 |
C2 |
C3 |
H1 |
180.0 |
180.1 |
C3 |
C2 |
C1 |
H2 |
180.7 |
180.0 |
C3 |
C4 |
C5 |
C6 |
179.0 |
180.0 |
C5 |
C4 |
C6 |
H3 |
357.7 |
0.1 |
C1 |
C |
C5 |
C4 |
359.8 |
0.1 |
C |
C5 |
C4 |
H5 |
180.0 |
179.9 |
C4 |
C5 |
C |
H6 |
179.8 |
180.0 |
C1 |
C2 |
C3 |
C4 |
358.3 |
0.0 |
C3 |
C2 |
C1 |
H1 |
180.0 |
179.9 |
C2 |
C1 |
C |
C5 |
0.2 |
359.9 |
C |
C1 |
C2 |
H2 |
180.0 |
180.1 |
C2 |
C1 |
C |
H6 |
180.2 |
180.0 |
C4 |
C5 |
C |
H5 |
180.0 |
180.1 |
C5 |
C |
C1 |
H2 |
180.2 |
180.0 |
C1 |
C |
C5 |
H6 |
180.0 |
180.1 |
C4 |
C5 |
C |
C1 |
359.8 |
0.1 |
C |
C1 |
C2 |
H1 |
180.7 |
180.1 |
C2 |
C1 |
C |
H2 |
180.0 |
179.9 |
C1 |
C |
C5 |
H5 |
179.8 |
180.0 |
C5 |
C |
C1 |
H6 |
180.0 |
179.9 |
H1 |
C2 |
C3 |
C4 |
178.3 |
180.0 |
C3 |
C2 |
H1 |
C1 |
180.0 |
180.1 |
H1 |
C2 |
C1 |
C |
180.7 |
180.1 |
H1 |
C2 |
C1 |
H2 |
0.8 |
0.0 |
C2 |
C1 |
H2 |
C |
180.0 |
180.1 |
H2 |
C1 |
C2 |
H1 |
0.8 |
0.0 |
H2 |
C1 |
C |
C5 |
180.2 |
180.0 |
H2 |
C1 |
C |
H6 |
0.2 |
0.1 |
C7 |
C6 |
H3 |
C4 |
180.0 |
180.3 |
H3 |
C6 |
C4 |
C5 |
357.7 |
0.1 |
C4 |
C5 |
H5 |
C |
180.0 |
179.9 |
H5 |
C5 |
C |
H6 |
359.8 |
359.9 |
C1 |
C |
H6 |
C5 |
180.0 |
179.9 |
H6 |
C |
C5 |
H5 |
359.8 |
359.9 |
H6 |
C |
C1 |
H2 |
0.2 |
0.1 |
C11 |
C12 |
H7 |
H8 |
122.8 |
238.8 |
N1 |
C12 |
H7 |
H8 |
237.2 |
121.0 |
C11 |
C12 |
H8 |
H7 |
237.2 |
121.1 |
N1 |
C12 |
H8 |
H7 |
122.8 |
239.0 |
C10 |
C11 |
H9 |
H10 |
123.3 |
236.6 |
H9 |
C11 |
C12 |
H7 |
23.9 |
21.2 |
H9 |
C11 |
C12 |
H8 |
145.8 |
260.0 |
C10 |
C11 |
H10 |
H9 |
236.7 |
123.3 |
H10 |
C11 |
C12 |
H7 |
261.6 |
144.3 |
H10 |
C11 |
C12 |
H8 |
23.5 |
23.1 |
C9 |
C10 |
H11 |
H12 |
121.9 |
236.1 |
H11 |
C10 |
C9 |
H13 |
279.4 |
159.9 |
H11 |
C10 |
C9 |
H14 |
42.5 |
37.5 |
H11 |
C10 |
C11 |
H9 |
318.5 |
324.2 |
H11 |
C10 |
C11 |
H10 |
80.8 |
200.9 |
C9 |
C10 |
H12 |
H11 |
238.1 |
124.0 |
H12 |
C10 |
C9 |
H13 |
40.7 |
35.9 |
H12 |
C10 |
C9 |
H14 |
163.8 |
273.6 |
H12 |
C10 |
C11 |
H9 |
197.2 |
88.1 |
H12 |
C10 |
C11 |
H10 |
319.5 |
324.8 |
H13 |
C9 |
C10 |
H11 |
279.4 |
159.9 |
H13 |
C9 |
C10 |
H12 |
40.7 |
35.9 |
C10 |
C9 |
H13 |
H14 |
124.4 |
237.7 |
H14 |
C9 |
C10 |
H11 |
42.5 |
37.5 |
H14 |
C9 |
C10 |
H12 |
163.8 |
273.6 |
C10 |
C9 |
H14 |
H13 |
235.6 |
122.3 |
H15 |
N |
C7 |
C6 |
180.0 |
180.0 |