PDB Chemical Component 2FY
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 2FY
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C1 |
C2 |
1.390 |
1.364 |
| C1 |
C10 |
1.391 |
1.402 |
| C2 |
C3 |
1.390 |
1.393 |
| C3 |
C4 |
1.391 |
1.388 |
| C3 |
O2 |
1.360 |
1.357 |
| C4 |
C5 |
1.390 |
1.384 |
| C5 |
C10 |
1.390 |
1.406 |
| C5 |
O8 |
1.359 |
1.357 |
| C6 |
O1 |
1.230 |
1.213 |
| C6 |
C9 |
1.531 |
1.507 |
| C6 |
C10 |
1.529 |
1.465 |
| C7 |
C9 |
1.530 |
1.530 |
| C1 |
H1 |
1.080 |
1.080 |
| C2 |
H2 |
1.080 |
1.080 |
| C4 |
H4 |
1.080 |
1.080 |
| O2 |
HA |
0.950 |
0.966 |
| O8 |
H8 |
0.950 |
0.967 |
| C9 |
H91C |
1.100 |
1.090 |
| C9 |
H92C |
1.100 |
1.090 |
| C7 |
H71C |
1.100 |
1.090 |
| C7 |
H72C |
1.100 |
1.090 |
| C7 |
H73C |
1.100 |
1.090 |
Bond Angles for 2FY
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C1 |
C2 |
H2 |
120.0 |
119.8 |
| C5 |
C10 |
C1 |
120.0 |
119.6 |
| C1 |
C10 |
C6 |
120.0 |
120.2 |
| C10 |
C1 |
H1 |
120.0 |
120.0 |
| C2 |
C3 |
O2 |
120.0 |
119.9 |
| C3 |
C4 |
H4 |
120.0 |
120.0 |
| C3 |
O2 |
HA |
109.5 |
114.0 |
| C4 |
C5 |
C10 |
120.0 |
119.6 |
| C4 |
C5 |
O8 |
120.0 |
120.2 |
| C10 |
C5 |
O8 |
120.0 |
120.2 |
| C5 |
C10 |
C6 |
120.0 |
120.2 |
| C5 |
O8 |
H8 |
109.5 |
114.0 |
| O1 |
C6 |
C9 |
120.4 |
120.0 |
| O1 |
C6 |
C10 |
120.4 |
120.0 |
| C9 |
C6 |
C10 |
119.2 |
120.0 |
| C6 |
C9 |
C7 |
111.0 |
109.5 |
| C6 |
C9 |
H91C |
109.0 |
109.5 |
| C6 |
C9 |
H92C |
108.9 |
109.5 |
| C7 |
C9 |
H91C |
109.0 |
109.4 |
| C7 |
C9 |
H92C |
109.0 |
109.5 |
| C9 |
C7 |
H71C |
109.5 |
109.5 |
| C9 |
C7 |
H72C |
109.5 |
109.5 |
| C9 |
C7 |
H73C |
109.5 |
109.5 |
| H91C |
C9 |
H92C |
110.0 |
109.5 |
| H71C |
C7 |
H72C |
109.4 |
109.4 |
| H71C |
C7 |
H73C |
109.5 |
109.5 |
| H72C |
C7 |
H73C |
109.5 |
109.5 |
Torsion Angles for 2FY
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C5 |
C10 |
C1 |
C2 |
0.0 |
0.1 |
| C1 |
C2 |
C3 |
O2 |
180.0 |
180.1 |
| C10 |
C1 |
C2 |
H2 |
180.0 |
180.0 |
| C4 |
C5 |
C10 |
C1 |
360.0 |
360.0 |
| C1 |
C10 |
C5 |
O8 |
180.0 |
180.2 |
| C5 |
C10 |
C1 |
C6 |
180.0 |
179.8 |
| O1 |
C6 |
C10 |
C1 |
119.8 |
179.7 |
| C9 |
C6 |
C10 |
C1 |
299.8 |
359.8 |
| C2 |
C3 |
C4 |
H4 |
180.0 |
180.0 |
| C2 |
C3 |
O2 |
HA |
180.0 |
270.0 |
| C3 |
C4 |
C5 |
C10 |
0.0 |
360.0 |
| C3 |
C4 |
C5 |
O8 |
180.0 |
179.7 |
| O2 |
C3 |
C4 |
H4 |
360.0 |
360.0 |
| C10 |
C5 |
C4 |
O8 |
180.0 |
180.3 |
| C4 |
C5 |
C10 |
C6 |
180.0 |
179.7 |
| C4 |
C5 |
O8 |
H8 |
198.2 |
270.2 |
| C1 |
C10 |
C5 |
C6 |
180.0 |
180.2 |
| C5 |
C10 |
C1 |
H1 |
180.0 |
180.0 |
| C4 |
C5 |
C10 |
O8 |
180.0 |
179.7 |
| C10 |
C5 |
O8 |
H8 |
18.1 |
90.0 |
| O1 |
C6 |
C10 |
C5 |
299.7 |
360.0 |
| C9 |
C6 |
C10 |
C5 |
119.8 |
180.0 |
| O8 |
C5 |
C10 |
C1 |
180.0 |
180.2 |
| C4 |
C5 |
O8 |
C10 |
180.0 |
180.3 |
| O8 |
C5 |
C10 |
C6 |
0.1 |
0.0 |
| C1 |
C10 |
C6 |
O1 |
119.8 |
179.7 |
| C5 |
C10 |
C6 |
O1 |
299.7 |
360.0 |
| C9 |
C6 |
O1 |
C10 |
180.0 |
180.0 |
| O1 |
C6 |
C9 |
C7 |
288.7 |
0.0 |
| O1 |
C6 |
C9 |
H91C |
48.7 |
120.0 |
| O1 |
C6 |
C9 |
H92C |
168.7 |
240.0 |
| C1 |
C10 |
C6 |
C9 |
299.8 |
359.8 |
| C5 |
C10 |
C6 |
C9 |
119.8 |
180.0 |
| O1 |
C6 |
C9 |
C10 |
180.0 |
180.0 |
| C7 |
C9 |
C6 |
H91C |
240.0 |
240.0 |
| C7 |
C9 |
C6 |
H92C |
120.0 |
120.0 |
| C6 |
C9 |
C7 |
H71C |
180.0 |
60.0 |
| C6 |
C9 |
C7 |
H72C |
300.0 |
180.0 |
| C6 |
C9 |
C7 |
H73C |
60.0 |
300.0 |
| H91C |
C9 |
C6 |
H92C |
240.0 |
240.0 |
| C5 |
C10 |
C6 |
C1 |
180.0 |
180.2 |
| C6 |
C10 |
C1 |
H1 |
360.0 |
0.2 |
| C6 |
C10 |
C5 |
O8 |
0.1 |
0.0 |
| O1 |
C6 |
C10 |
C9 |
180.0 |
180.0 |
| C10 |
C6 |
C9 |
C7 |
108.7 |
180.0 |
| C10 |
C6 |
C9 |
H91C |
228.6 |
299.9 |
| C10 |
C6 |
C9 |
H92C |
348.7 |
60.0 |
| C7 |
C9 |
C6 |
C10 |
108.7 |
180.0 |
| C6 |
C9 |
C7 |
H91C |
120.0 |
120.0 |
| C6 |
C9 |
C7 |
H92C |
240.0 |
240.0 |
| H91C |
C9 |
C7 |
H92C |
120.1 |
120.0 |
| H71C |
C7 |
C9 |
H72C |
240.0 |
240.0 |
| H71C |
C7 |
C9 |
H73C |
120.0 |
120.0 |
| H72C |
C7 |
C9 |
H73C |
240.0 |
240.0 |
| H1 |
C1 |
C2 |
H2 |
0.0 |
0.1 |
| H1 |
C1 |
C10 |
C6 |
360.0 |
0.2 |
| H2 |
C2 |
C3 |
O2 |
360.0 |
360.0 |
| H4 |
C4 |
C5 |
C10 |
180.0 |
180.0 |
| H4 |
C4 |
C5 |
O8 |
360.0 |
359.7 |
| H91C |
C9 |
C6 |
C10 |
228.6 |
299.9 |
| C6 |
C9 |
H91C |
C7 |
238.8 |
240.0 |
| C6 |
C9 |
H91C |
H92C |
119.4 |
120.1 |
| C7 |
C9 |
H91C |
H92C |
240.6 |
240.0 |
| H91C |
C9 |
C7 |
H71C |
60.0 |
300.0 |
| H91C |
C9 |
C7 |
H72C |
180.0 |
60.0 |
| H91C |
C9 |
C7 |
H73C |
300.0 |
180.0 |
| H92C |
C9 |
C6 |
C10 |
348.7 |
60.0 |
| C6 |
C9 |
H92C |
C7 |
121.2 |
120.0 |
| C6 |
C9 |
H92C |
H91C |
240.6 |
239.9 |
| C7 |
C9 |
H92C |
H91C |
119.4 |
119.9 |
| H92C |
C9 |
C7 |
H71C |
300.0 |
180.0 |
| H92C |
C9 |
C7 |
H72C |
60.0 |
300.0 |
| H92C |
C9 |
C7 |
H73C |
180.0 |
60.0 |
| H71C |
C7 |
C9 |
H91C |
60.0 |
300.0 |
| H71C |
C7 |
C9 |
H92C |
300.0 |
180.0 |
| C9 |
C7 |
H71C |
H72C |
120.0 |
120.0 |
| C9 |
C7 |
H71C |
H73C |
240.0 |
240.0 |
| H72C |
C7 |
H71C |
H73C |
120.0 |
120.0 |
| H72C |
C7 |
C9 |
H91C |
180.0 |
60.0 |
| H72C |
C7 |
C9 |
H92C |
60.0 |
300.0 |
| C9 |
C7 |
H72C |
H71C |
240.0 |
240.0 |
| C9 |
C7 |
H72C |
H73C |
120.0 |
120.0 |
| H71C |
C7 |
H72C |
H73C |
240.0 |
240.0 |
| H73C |
C7 |
C9 |
H91C |
300.0 |
180.0 |
| H73C |
C7 |
C9 |
H92C |
180.0 |
60.0 |
| C9 |
C7 |
H73C |
H71C |
120.0 |
120.0 |
| C9 |
C7 |
H73C |
H72C |
240.0 |
240.0 |
| H71C |
C7 |
H73C |
H72C |
120.0 |
119.9 |