PDB Chemical Component 2FD

Ideal Model

Chemical Description

Name 5-(6-AMINO-2-FLUORO-PURIN-9-YL)-2-HYDROXYMETHYL-TETRAHYDRO-FURAN-3-OL
Synonyms 2-FLUORO-2'-DEOXYADENOSINE
Formula C10 H12 F N5 O3
Formal charge 0
Molecular weight 269.232 g/mol
Component type NON-POLYMER

Chemical features

Atom count 31
Chiral atom count 3
Chiral atoms C4' C1' C3'
Bond count 33
Aromatic bond count 10

Chemical Identifiers

Systematic name (ACDLabs) 2'-deoxy-2-fluoroadenosine
Systematic name (OpenEye OEToolkits) (2R,3S,5R)-5-(6-amino-2-fluoro-purin-9-yl)-2-(hydroxymethyl)oxolan-3-ol

Chemical Descriptors

Stereo SMILES (CACTVS) Nc1nc(F)nc2n(cnc12)[C@H]3C[C@H](O)[C@@H](CO)O3
SMILES (CACTVS) Nc1nc(F)nc2n(cnc12)[CH]3C[CH](O)[CH](CO)O3
Stereo SMILES (OpenEye) c1nc2c(nc(nc2n1[C@H]3C[C@@H]([C@H](O3)CO)O)F)N
InChI descriptor InChI=1S/C10H12FN5O3/c11-10-14-8(12)7-9(15-10)16(3-13-7)6-1-4(18)5(2-17)19-6/h3-6,17-18H,1-2H2,(H2,12,14,15)/t4-,5+,6+/m0/s1
InChIKey descriptor ZWPYUXAXLRFWQC-KVQBGUIXSA-N

Status Information

Last modified 2020-06-17
Created 2003-08-06
Release status REL
Model PDB code 1PKE
Processing site RCSB