PDB Chemical Component 2EG

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 2EG

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
OP3 P 1.602 1.480
OP1 P 1.475 1.609
P OP2 1.475 1.610
P O5' 1.597 1.610
O5' C5' 1.415 1.429
C5' C4' 1.526 1.530
C5' H5' 1.100 1.090
C5' H5'' 1.100 1.091
C4' O4' 1.423 1.444
C4' C3' 1.534 1.550
C4' H4' 1.100 1.089
O4' C1' 1.414 1.437
C3' O3' 1.417 1.430
C3' C2' 1.529 1.548
C3' H3' 1.100 1.090
C2' C1' 1.526 1.541
C2' H2' 1.100 1.090
C2' H2'' 1.100 1.090
C1' N9 1.484 1.465
C1' H1' 1.100 1.089
N9 C4 1.372 1.369
N9 C8 1.374 1.365
C4 N3 1.360 1.338
C4 C5 1.378 1.399
N3 C2 1.342 1.314
C8 N7 1.309 1.301
C8 H8 1.081 1.080
N7 C5 1.404 1.356
C5 C6 1.440 1.414
C6 O6 1.234 1.219
C6 N1 1.385 1.351
N1 C2 1.376 1.362
N1 H1 1.000 0.971
C2 N2 1.338 1.372
N2 C21 1.468 1.465
N2 H21 1.000 0.970
C21 C22 1.529 1.530
C21 H211 1.100 1.090
C21 H212 1.100 1.090
C22 H221 1.100 1.090
C22 H222 1.100 1.090
C22 H223 1.100 1.090
HO1 O3' 0.950 0.968
HO2 OP2 0.950 0.967
HO3 OP1 0.950 0.968

Bond Angles for 2EG

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
OP3 P OP1 108.7 109.5
OP3 P OP2 107.7 109.5
OP3 P O5' 102.6 109.5
OP1 P OP2 120.7 109.5
OP1 P O5' 108.0 109.5
OP2 P O5' 107.7 109.5
P O5' C5' 119.9 123.0
O5' C5' C4' 111.7 109.4
O5' C5' H5' 108.8 109.5
O5' C5' H5'' 108.2 109.5
C4' C5' H5' 108.7 109.5
C4' C5' H5'' 108.3 109.4
C5' C4' O4' 110.8 110.6
C5' C4' C3' 113.5 110.6
C5' C4' H4' 105.4 110.6
H5' C5' H5'' 111.2 109.5
O4' C4' C3' 108.4 103.5
O4' C4' H4' 110.8 110.6
C4' O4' C1' 108.0 107.0
C3' C4' H4' 107.9 110.8
C4' C3' O3' 104.9 110.9
C4' C3' C2' 101.6 102.1
C4' C3' H3' 119.2 111.0
O4' C1' C2' 104.9 107.3
O4' C1' N9 110.4 109.9
O4' C1' H1' 114.1 109.9
O3' C3' C2' 115.0 110.9
O3' C3' H3' 106.7 110.8
C2' C3' H3' 109.8 111.0
C3' C2' C1' 101.0 104.2
C3' C2' H2' 112.4 110.5
C3' C2' H2'' 114.2 110.5
C1' C2' H2' 112.4 110.5
C1' C2' H2'' 114.2 110.5
C2' C1' N9 115.3 109.9
C2' C1' H1' 109.1 109.9
H2' C2' H2'' 103.1 110.5
N9 C1' H1' 103.4 110.0
C1' N9 C4 124.3 126.3
C1' N9 C8 130.5 126.2
C4 N9 C8 105.1 107.5
N9 C4 N3 125.9 134.2
N9 C4 C5 107.0 106.1
N9 C8 N7 114.4 109.8
N9 C8 H8 122.8 125.1
N3 C4 C5 127.1 119.7
C4 N3 C2 114.3 121.1
C4 C5 N7 109.8 107.2
C4 C5 C6 118.1 118.6
N3 C2 N1 122.4 121.9
N3 C2 N2 120.7 119.0
N7 C8 H8 122.8 125.1
C8 N7 C5 103.6 109.3
N7 C5 C6 132.1 134.2
C5 C6 O6 129.2 120.8
C5 C6 N1 113.5 118.3
O6 C6 N1 117.3 120.9
C6 N1 C2 124.5 120.4
C6 N1 H1 117.7 119.8
C2 N1 H1 117.8 119.8
N1 C2 N2 116.8 119.1
C2 N2 C21 124.6 120.0
C2 N2 H21 117.7 120.0
C21 N2 H21 117.7 120.0
N2 C21 C22 109.4 109.5
N2 C21 H211 109.5 109.5
N2 C21 H212 109.5 109.5
C22 C21 H211 109.5 109.4
C22 C21 H212 109.5 109.5
C21 C22 H221 109.5 109.5
C21 C22 H222 109.5 109.5
C21 C22 H223 109.5 109.5
H211 C21 H212 109.5 109.5
H221 C22 H222 109.4 109.5
H221 C22 H223 109.4 109.5
H222 C22 H223 109.5 109.4

Torsion Angles for 2EG

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
OP1 P OP3 OP2 227.6 240.0
OP1 P OP3 O5' 114.1 120.0
OP2 P OP3 O5' 246.5 240.0
OP3 P O5' C5' 293.0 305.0
OP3 P OP1 OP2 125.1 120.0
OP3 P OP1 O5' 249.5 240.0
OP2 P OP1 O5' 124.4 120.0
OP1 P O5' C5' 178.4 185.0
OP3 P OP2 OP1 234.5 240.0
OP3 P OP2 O5' 110.0 120.0
OP1 P OP2 O5' 235.5 240.0
OP2 P O5' C5' 46.5 65.0
OP3 P O5' OP1 114.6 120.0
OP3 P O5' OP2 246.5 240.0
OP1 P O5' OP2 131.9 120.0
P O5' C5' C4' 172.8 180.0
P O5' C5' H5' 292.8 300.0
P O5' C5' H5'' 53.7 60.0
C4' C5' O5' H5' 240.0 240.0
C4' C5' O5' H5'' 119.1 120.0
O5' C5' C4' O4' 292.4 66.5
O5' C5' C4' C3' 54.7 180.5
O5' C5' C4' H4' 172.5 303.6
H5' C5' O5' H5'' 239.1 240.0
O5' C5' C4' H5' 120.0 120.0
O5' C5' C4' H5'' 240.9 240.0
H5' C5' C4' H5'' 120.9 120.0
O4' C4' C5' C3' 237.8 246.0
O4' C4' C5' H4' 119.9 122.9
C5' C4' O4' C1' 134.2 158.5
C3' C4' C5' H4' 242.1 236.9
C5' C4' C3' O3' 133.0 86.3
C5' C4' C3' C2' 253.0 204.5
C5' C4' C3' H3' 13.6 322.8
O5' C5' H5' C4' 238.2 240.0
O5' C5' H5' H5'' 119.1 120.0
C4' C5' H5' H5'' 240.9 240.0
H5' C5' C4' O4' 172.4 306.4
H5' C5' C4' C3' 294.7 60.5
H5' C5' C4' H4' 52.5 183.6
O5' C5' H5'' C4' 121.2 120.0
O5' C5' H5'' H5' 240.6 240.0
C4' C5' H5'' H5' 119.4 120.0
H5'' C5' C4' O4' 51.5 186.5
H5'' C5' C4' C3' 173.7 300.5
H5'' C5' C4' H4' 291.6 63.6
O4' C4' C5' H5' 172.4 306.4
O4' C4' C5' H5'' 51.5 186.5
C5' C4' O4' C3' 125.2 118.5
C5' C4' O4' H4' 243.4 237.1
C3' C4' O4' H4' 118.2 118.6
O4' C4' C3' O3' 256.5 204.8
O4' C4' C3' C2' 16.5 323.0
O4' C4' C3' H3' 137.2 81.3
C4' O4' C1' C2' 328.7 333.5
C4' O4' C1' N9 203.9 214.1
C4' O4' C1' H1' 88.0 92.9
C3' C4' C5' H5' 294.7 60.5
C3' C4' C5' H5'' 173.7 300.5
C5' C4' C3' O4' 236.5 241.5
C5' C4' C3' H4' 116.4 123.0
O4' C4' C3' H4' 239.9 241.5
C3' C4' O4' C1' 9.0 40.0
O3' C3' C4' C2' 240.0 241.8
O3' C3' C4' H3' 119.3 123.5
C2' C3' C4' H3' 239.4 241.7
C4' C3' C2' C1' 326.6 20.9
C4' C3' C2' H2' 86.6 139.6
C4' C3' C2' H2'' 203.7 262.2
H4' C4' C5' H5' 52.5 183.6
H4' C4' C5' H5'' 291.6 63.6
C5' C4' H4' O4' 119.9 122.9
C5' C4' H4' C3' 238.4 237.0
O4' C4' H4' C3' 118.5 114.1
H4' C4' O4' C1' 250.8 281.4
H4' C4' C3' O3' 16.6 323.3
H4' C4' C3' C2' 136.6 81.5
H4' C4' C3' H3' 257.2 199.8
C1' O4' C4' C3' 9.0 40.0
C1' O4' C4' H4' 250.8 281.4
C3' C2' C1' O4' 40.7 2.0
O4' C1' C2' H2' 280.7 243.3
O4' C1' C2' H2'' 163.7 120.7
C2' C1' O4' N9 124.8 119.4
C2' C1' O4' H1' 240.7 240.6
N9 C1' O4' H1' 115.9 121.2
O4' C1' N9 C4 262.0 203.6
O4' C1' N9 C8 83.9 23.2
O3' C3' C4' H4' 16.6 323.3
C4' C3' O3' C2' 110.7 112.7
C4' C3' O3' H3' 232.6 236.4
C2' C3' O3' H3' 122.0 123.6
O3' C3' C2' C1' 79.3 139.1
O3' C3' C2' H2' 199.3 257.8
O3' C3' C2' H2'' 316.3 20.4
C2' C3' C4' H4' 136.6 81.5
C4' C3' C2' O3' 247.4 241.8
C4' C3' C2' H3' 127.0 118.3
O4' C1' C2' C3' 40.7 2.0
O3' C3' C2' H3' 239.7 236.5
C1' C2' C3' H2' 240.0 241.3
C1' C2' C3' H2'' 123.0 118.7
C3' C2' C1' N9 162.3 121.5
C3' C2' C1' H1' 278.0 242.6
H2' C2' C3' H2'' 243.0 237.4
H3' C3' C4' H4' 257.2 199.8
C4' C3' H3' O3' 118.4 123.6
C4' C3' H3' C2' 243.6 247.2
O3' C3' H3' C2' 125.2 123.6
H3' C3' C2' C1' 199.6 262.6
H3' C3' C2' H2' 319.6 21.3
H3' C3' C2' H2'' 76.6 143.9
O4' C1' C2' N9 238.4 240.5
O4' C1' C2' H1' 122.6 119.4
C1' C2' C3' H3' 199.6 262.6
C3' C2' C1' H2' 120.0 118.7
C3' C2' C1' H2'' 237.0 241.3
H2' C2' C1' H2'' 117.0 122.7
N9 C1' C2' H1' 244.3 238.8
C2' C1' N9 C4 143.4 85.7
C2' C1' N9 C8 325.3 265.4
H2' C2' C3' H3' 319.6 21.3
C3' C2' H2' C1' 246.9 245.2
C3' C2' H2' H2'' 123.5 122.6
C1' C2' H2' H2'' 236.6 237.3
H2' C2' C1' N9 42.3 2.8
H2' C2' C1' H1' 158.0 123.9
H2'' C2' C3' H3' 76.6 143.9
C3' C2' H2'' C1' 115.5 114.8
C3' C2' H2'' H2' 237.7 237.4
C1' C2' H2'' H2' 122.3 122.7
H2'' C2' C1' N9 285.3 240.1
H2'' C2' C1' H1' 41.0 1.3
O4' C1' N9 C2' 118.6 117.8
O4' C1' N9 H1' 237.6 238.9
N9 C1' C2' H2' 42.3 2.8
N9 C1' C2' H2'' 285.3 240.1
C2' C1' N9 H1' 119.0 121.1
C4 N9 C1' C8 178.1 180.4
C1' N9 C4 N3 0.5 360.0
C1' N9 C4 C5 181.4 180.0
C1' N9 C8 N7 178.6 180.0
C1' N9 C8 H8 358.7 360.0
O4' C1' H1' C2' 243.1 242.2
O4' C1' H1' N9 119.9 121.1
H1' C1' C2' H2' 158.0 123.9
H1' C1' C2' H2'' 41.0 1.3
C2' C1' H1' N9 236.8 238.9
H1' C1' N9 C4 24.4 324.7
H1' C1' N9 C8 206.3 144.3
C4 N9 C1' H1' 24.4 324.7
C1' N9 C4 C8 181.5 179.7
C4 N9 C8 N7 0.3 359.7
C4 N9 C8 H8 180.3 179.7
N3 C4 N9 C5 179.1 180.0
N9 C4 N3 C2 182.4 180.1
N9 C4 C5 N7 359.9 359.8
N9 C4 C5 C6 179.2 180.0
C8 N9 C1' H1' 206.3 144.3
C1' N9 C8 C4 178.4 180.3
C8 N9 C4 N3 179.0 180.3
C8 N9 C4 C5 359.9 0.3
N7 C8 N9 H8 180.0 180.0
N9 C8 N7 C5 359.7 0.2
N3 C4 N9 C8 179.0 180.3
N9 C4 N3 C5 181.1 180.0
N3 C4 C5 N7 180.8 179.8
N3 C4 C5 C6 0.2 0.0
C4 N3 C2 N1 358.9 359.9
C4 N3 C2 N2 180.2 180.0
C5 C4 N9 C8 359.9 0.3
N9 C4 C5 N3 179.1 180.0
C5 C4 N3 C2 1.4 0.0
C8 N7 C5 C4 0.3 0.0
N7 C5 C4 C6 180.7 179.8
C4 C5 C6 O6 179.3 180.0
C4 C5 C6 N1 358.1 360.0
C2 N3 C4 C5 1.4 0.0
C6 N1 C2 N3 359.2 0.1
N3 C2 N1 H1 179.2 180.1
N1 C2 N3 N2 178.7 179.9
N3 C2 N2 C21 7.6 360.0
N3 C2 N2 H21 187.6 180.0
N9 C8 N7 H8 180.0 180.0
C4 C5 N7 C8 0.3 0.0
C8 N7 C5 C6 181.1 179.8
N9 C8 H8 N7 180.0 180.0
H8 C8 N7 C5 179.6 180.2
C4 C5 N7 C6 179.2 180.3
C5 N7 C8 H8 179.6 180.2
N7 C5 C6 O6 358.5 0.3
N7 C5 C6 N1 177.3 180.2
C4 C5 C6 N7 180.9 179.7
O6 C6 C5 N1 181.2 180.0
C5 C6 N1 C2 2.2 360.0
C5 C6 N1 H1 182.2 179.9
C5 C6 O6 N1 178.8 180.0
O6 C6 N1 C2 181.2 179.9
O6 C6 N1 H1 1.2 359.9
N3 C2 N1 C6 359.2 0.1
C5 C6 N1 O6 181.0 180.0
C2 N1 C6 H1 180.0 180.0
C6 N1 C2 N2 178.0 180.0
N3 C2 N1 N2 181.2 180.1
C6 N1 C2 H1 180.0 180.0
N1 C2 N2 C21 188.8 180.0
N1 C2 N2 H21 8.8 0.0
C6 N1 H1 C2 180.0 180.0
H1 N1 C2 N2 358.0 0.1
N3 C2 N2 N1 178.8 179.9
N2 C2 N1 H1 358.0 0.1
C21 N2 C2 H21 180.0 180.0
C2 N2 C21 C22 226.6 180.0
C2 N2 C21 H211 346.6 300.0
C2 N2 C21 H212 106.6 60.0
C2 N2 C21 H21 180.0 180.0
C22 C21 N2 H211 240.0 240.0
C22 C21 N2 H212 120.0 120.0
N2 C21 C22 H221 258.4 60.0
N2 C21 C22 H222 18.4 180.0
N2 C21 C22 H223 138.4 300.0
H211 C21 N2 H212 240.0 240.0
C2 N2 H21 C21 180.0 180.0
H21 N2 C21 C22 46.6 360.0
H21 N2 C21 H211 166.6 120.0
H21 N2 C21 H212 286.6 240.0
C22 C21 N2 H21 46.6 360.0
N2 C21 C22 H211 120.0 120.0
N2 C21 C22 H212 240.0 240.0
H211 C21 C22 H212 120.0 120.0
H221 C22 C21 H222 240.0 240.0
H221 C22 C21 H223 120.0 120.0
H222 C22 C21 H223 240.0 240.0
H211 C21 N2 H21 166.6 120.0
N2 C21 H211 C22 240.0 240.0
N2 C21 H211 H212 120.0 120.0
C22 C21 H211 H212 240.0 240.0
H211 C21 C22 H221 138.4 300.0
H211 C21 C22 H222 258.4 60.0
H211 C21 C22 H223 18.4 180.0
H212 C21 N2 H21 286.6 240.0
N2 C21 H212 C22 120.0 120.0
N2 C21 H212 H211 240.0 240.0
C22 C21 H212 H211 120.0 120.0
H212 C21 C22 H221 18.4 180.0
H212 C21 C22 H222 138.4 300.0
H212 C21 C22 H223 258.4 60.0
H221 C22 C21 H211 138.4 300.0
H221 C22 C21 H212 18.4 180.0
C21 C22 H221 H222 120.0 120.0
C21 C22 H221 H223 240.0 240.0
H222 C22 H221 H223 120.0 120.0
H222 C22 C21 H211 258.4 60.0
H222 C22 C21 H212 138.4 300.0
C21 C22 H222 H221 240.0 240.0
C21 C22 H222 H223 120.0 120.0
H221 C22 H222 H223 240.0 240.0
H223 C22 C21 H211 18.4 180.0
H223 C22 C21 H212 258.4 60.0
C21 C22 H223 H221 120.0 120.0
C21 C22 H223 H222 240.0 240.0
H221 C22 H223 H222 120.0 120.0