PDB Chemical Component 2EC
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 2EC
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N6 |
C6 |
1.469 |
1.384 |
| C6 |
C5 |
1.384 |
1.405 |
| C6 |
N1 |
1.338 |
1.329 |
| C5 |
N7 |
1.336 |
1.355 |
| C5 |
C4 |
1.380 |
1.404 |
| N7 |
C8 |
1.340 |
1.302 |
| C4 |
N9 |
1.336 |
1.372 |
| C4 |
N3 |
1.337 |
1.329 |
| N9 |
C8 |
1.340 |
1.363 |
| N9 |
C9M |
1.470 |
1.465 |
| C9M |
C50 |
1.512 |
1.531 |
| N3 |
C2 |
1.339 |
1.316 |
| C2 |
N1 |
1.340 |
1.321 |
| N6 |
H61N |
1.000 |
0.971 |
| N6 |
H62N |
1.000 |
0.970 |
| C8 |
H8 |
1.080 |
1.080 |
| C9M |
H9M1 |
1.100 |
1.089 |
| C9M |
H9M2 |
1.100 |
1.090 |
| C50 |
H501 |
1.100 |
1.090 |
| C50 |
H502 |
1.100 |
1.090 |
| C50 |
H503 |
1.100 |
1.090 |
| C2 |
H2 |
1.080 |
1.080 |
Bond Angles for 2EC
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N6 |
C6 |
C5 |
120.4 |
120.8 |
| N6 |
C6 |
N1 |
120.4 |
120.8 |
| C6 |
N6 |
H61N |
109.5 |
120.0 |
| C6 |
N6 |
H62N |
109.5 |
120.0 |
| C5 |
C6 |
N1 |
119.2 |
118.5 |
| C6 |
C5 |
N7 |
133.3 |
134.7 |
| C6 |
C5 |
C4 |
119.1 |
118.2 |
| C6 |
N1 |
C2 |
120.5 |
121.2 |
| N7 |
C5 |
C4 |
107.5 |
107.1 |
| C5 |
N7 |
C8 |
108.0 |
109.4 |
| C5 |
C4 |
N9 |
107.4 |
106.0 |
| C5 |
C4 |
N3 |
119.6 |
119.1 |
| N7 |
C8 |
N9 |
109.0 |
110.0 |
| N7 |
C8 |
H8 |
125.5 |
125.0 |
| N9 |
C4 |
N3 |
133.0 |
134.9 |
| C4 |
N9 |
C8 |
108.1 |
107.4 |
| C4 |
N9 |
C9M |
126.0 |
126.3 |
| C4 |
N3 |
C2 |
120.3 |
120.7 |
| C8 |
N9 |
C9M |
125.9 |
126.2 |
| N9 |
C8 |
H8 |
125.5 |
125.1 |
| N9 |
C9M |
C50 |
109.5 |
109.4 |
| N9 |
C9M |
H9M1 |
109.5 |
109.5 |
| N9 |
C9M |
H9M2 |
109.4 |
109.5 |
| C50 |
C9M |
H9M1 |
109.4 |
109.4 |
| C50 |
C9M |
H9M2 |
109.4 |
109.4 |
| C9M |
C50 |
H501 |
109.5 |
109.4 |
| C9M |
C50 |
H502 |
109.5 |
109.5 |
| C9M |
C50 |
H503 |
109.4 |
109.5 |
| N3 |
C2 |
N1 |
121.3 |
122.4 |
| N3 |
C2 |
H2 |
119.4 |
118.8 |
| N1 |
C2 |
H2 |
119.4 |
118.7 |
| H61N |
N6 |
H62N |
109.5 |
120.0 |
| H9M1 |
C9M |
H9M2 |
109.5 |
109.5 |
| H501 |
C50 |
H502 |
109.4 |
109.5 |
| H501 |
C50 |
H503 |
109.5 |
109.4 |
| H502 |
C50 |
H503 |
109.5 |
109.5 |
Torsion Angles for 2EC
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C5 |
C6 |
N6 |
N1 |
180.0 |
180.2 |
| N6 |
C6 |
C5 |
N7 |
0.0 |
0.0 |
| N6 |
C6 |
C5 |
C4 |
180.0 |
180.1 |
| N6 |
C6 |
N1 |
C2 |
180.0 |
179.7 |
| H61N |
N6 |
C6 |
H62N |
240.0 |
180.2 |
| N6 |
C6 |
C5 |
N1 |
180.0 |
179.8 |
| C5 |
C6 |
N6 |
H61N |
180.0 |
359.9 |
| C5 |
C6 |
N6 |
H62N |
300.0 |
179.7 |
| C5 |
C6 |
N1 |
C2 |
0.0 |
359.5 |
| N7 |
C5 |
C6 |
C4 |
180.0 |
180.0 |
| C6 |
C5 |
N7 |
C8 |
180.0 |
180.0 |
| C6 |
C5 |
C4 |
N9 |
180.0 |
180.0 |
| C6 |
C5 |
C4 |
N3 |
0.0 |
359.9 |
| N6 |
C6 |
N1 |
C5 |
180.0 |
180.2 |
| N1 |
C6 |
N6 |
H61N |
360.0 |
179.7 |
| N1 |
C6 |
N6 |
H62N |
120.0 |
359.5 |
| N1 |
C6 |
C5 |
N7 |
180.0 |
180.2 |
| N1 |
C6 |
C5 |
C4 |
360.0 |
0.3 |
| N3 |
C2 |
N1 |
C6 |
0.0 |
0.5 |
| C6 |
N1 |
C2 |
H2 |
180.0 |
180.3 |
| N7 |
C5 |
C6 |
N1 |
180.0 |
180.2 |
| C6 |
C5 |
N7 |
C4 |
180.0 |
180.0 |
| N7 |
C5 |
C4 |
N9 |
360.0 |
0.0 |
| N7 |
C5 |
C4 |
N3 |
180.0 |
179.9 |
| C5 |
N7 |
C8 |
N9 |
0.0 |
360.0 |
| C5 |
N7 |
C8 |
H8 |
180.0 |
180.0 |
| C4 |
C5 |
C6 |
N1 |
360.0 |
0.3 |
| C6 |
C5 |
C4 |
N7 |
180.0 |
180.0 |
| C4 |
C5 |
N7 |
C8 |
0.0 |
360.0 |
| N9 |
C4 |
C5 |
N3 |
179.9 |
180.1 |
| C5 |
C4 |
N9 |
C8 |
0.0 |
360.0 |
| C5 |
C4 |
N9 |
C9M |
180.0 |
180.0 |
| C5 |
C4 |
N3 |
C2 |
360.0 |
0.1 |
| C8 |
N7 |
C5 |
C4 |
0.0 |
360.0 |
| C4 |
N9 |
C8 |
N7 |
360.0 |
0.0 |
| N7 |
C8 |
N9 |
C9M |
180.0 |
180.0 |
| N9 |
C8 |
N7 |
H8 |
180.0 |
180.0 |
| C5 |
C4 |
N9 |
N3 |
180.1 |
179.9 |
| N7 |
C8 |
N9 |
C4 |
360.0 |
0.0 |
| N9 |
C4 |
N3 |
C2 |
180.0 |
180.0 |
| C8 |
N9 |
C4 |
C9M |
180.0 |
180.0 |
| C4 |
N9 |
C8 |
H8 |
180.0 |
180.0 |
| C4 |
N9 |
C9M |
C50 |
120.7 |
85.0 |
| C4 |
N9 |
C9M |
H9M1 |
240.7 |
205.0 |
| C4 |
N9 |
C9M |
H9M2 |
0.7 |
325.0 |
| C5 |
C4 |
N3 |
N9 |
179.9 |
180.1 |
| N3 |
C4 |
N9 |
C8 |
180.0 |
180.1 |
| N3 |
C4 |
N9 |
C9M |
359.9 |
0.0 |
| C4 |
N3 |
C2 |
N1 |
0.0 |
359.7 |
| C4 |
N3 |
C2 |
H2 |
180.0 |
179.9 |
| N7 |
C8 |
N9 |
H8 |
180.0 |
180.0 |
| C8 |
N9 |
C4 |
N3 |
180.0 |
180.1 |
| C4 |
N9 |
C8 |
C9M |
180.0 |
180.0 |
| C8 |
N9 |
C9M |
C50 |
300.6 |
265.0 |
| C8 |
N9 |
C9M |
H9M1 |
60.6 |
25.0 |
| C8 |
N9 |
C9M |
H9M2 |
180.6 |
145.0 |
| C9M |
N9 |
C4 |
N3 |
359.9 |
0.0 |
| C4 |
N9 |
C9M |
C8 |
180.0 |
180.0 |
| C9M |
N9 |
C8 |
H8 |
0.0 |
0.0 |
| C50 |
C9M |
N9 |
H9M1 |
240.0 |
240.0 |
| C50 |
C9M |
N9 |
H9M2 |
120.0 |
120.0 |
| N9 |
C9M |
C50 |
H501 |
180.0 |
300.0 |
| N9 |
C9M |
C50 |
H502 |
300.0 |
60.0 |
| N9 |
C9M |
C50 |
H503 |
60.0 |
180.1 |
| H9M1 |
C9M |
N9 |
H9M2 |
240.0 |
239.9 |
| N9 |
C9M |
C50 |
H9M1 |
120.0 |
120.0 |
| N9 |
C9M |
C50 |
H9M2 |
240.0 |
240.0 |
| H9M1 |
C9M |
C50 |
H9M2 |
120.0 |
120.0 |
| H501 |
C50 |
C9M |
H502 |
240.0 |
239.9 |
| H501 |
C50 |
C9M |
H503 |
120.0 |
119.9 |
| H502 |
C50 |
C9M |
H503 |
240.0 |
240.0 |
| C6 |
N1 |
C2 |
N3 |
0.0 |
0.5 |
| N1 |
C2 |
N3 |
H2 |
180.0 |
179.8 |
| N3 |
C2 |
N1 |
H2 |
180.0 |
180.2 |
| H61N |
N6 |
C6 |
C5 |
180.0 |
359.9 |
| H61N |
N6 |
C6 |
N1 |
360.0 |
179.7 |
| C6 |
N6 |
H61N |
H62N |
120.0 |
179.8 |
| H62N |
N6 |
C6 |
C5 |
300.0 |
179.7 |
| H62N |
N6 |
C6 |
N1 |
120.0 |
359.5 |
| C6 |
N6 |
H62N |
H61N |
239.9 |
180.2 |
| N7 |
C8 |
H8 |
N9 |
180.0 |
180.0 |
| H8 |
C8 |
N9 |
C9M |
0.0 |
0.0 |
| N9 |
C9M |
H9M1 |
C50 |
239.9 |
240.0 |
| N9 |
C9M |
H9M1 |
H9M2 |
120.0 |
120.1 |
| C50 |
C9M |
H9M1 |
H9M2 |
240.0 |
240.1 |
| H9M1 |
C9M |
C50 |
H501 |
60.0 |
180.0 |
| H9M1 |
C9M |
C50 |
H502 |
180.0 |
300.0 |
| H9M1 |
C9M |
C50 |
H503 |
300.0 |
60.1 |
| N9 |
C9M |
H9M2 |
C50 |
120.0 |
120.0 |
| N9 |
C9M |
H9M2 |
H9M1 |
240.0 |
239.9 |
| C50 |
C9M |
H9M2 |
H9M1 |
120.0 |
119.9 |
| H9M2 |
C9M |
C50 |
H501 |
300.0 |
60.0 |
| H9M2 |
C9M |
C50 |
H502 |
60.0 |
180.0 |
| H9M2 |
C9M |
C50 |
H503 |
180.0 |
300.1 |
| H501 |
C50 |
C9M |
H9M1 |
60.0 |
180.0 |
| H501 |
C50 |
C9M |
H9M2 |
300.0 |
60.0 |
| C9M |
C50 |
H501 |
H502 |
120.0 |
120.0 |
| C9M |
C50 |
H501 |
H503 |
240.0 |
240.1 |
| H502 |
C50 |
H501 |
H503 |
120.0 |
120.0 |
| H502 |
C50 |
C9M |
H9M1 |
180.0 |
300.0 |
| H502 |
C50 |
C9M |
H9M2 |
60.0 |
180.0 |
| C9M |
C50 |
H502 |
H501 |
240.0 |
240.0 |
| C9M |
C50 |
H502 |
H503 |
120.0 |
120.0 |
| H501 |
C50 |
H502 |
H503 |
240.0 |
240.0 |
| H503 |
C50 |
C9M |
H9M1 |
300.0 |
60.1 |
| H503 |
C50 |
C9M |
H9M2 |
180.0 |
300.1 |
| C9M |
C50 |
H503 |
H501 |
120.0 |
119.9 |
| C9M |
C50 |
H503 |
H502 |
240.0 |
240.0 |
| H501 |
C50 |
H503 |
H502 |
120.0 |
120.0 |
| N3 |
C2 |
H2 |
N1 |
180.0 |
179.8 |