PDB Chemical Component 2DA

Ideal Model

Chemical Description

Name 2',3'-DIDEOXYADENOSINE-5'-MONOPHOSPHATE
Formula C10 H14 N5 O5 P
Formal charge 0
Molecular weight 315.222 g/mol
Component type DNA LINKING
Nonstandard Parent Id DA

Chemical features

Atom count 35
Chiral atom count 2
Chiral atoms C4' C1'
Observed leaving atoms OP3
Bond count 37
Aromatic bond count 10

Chemical Identifiers

Systematic name (ACDLabs) [(2S,5R)-5-(6-amino-9H-purin-9-yl)tetrahydrofuran-2-yl]methyl dihydrogen phosphate
Systematic name (OpenEye OEToolkits) [(2S,5R)-5-(6-aminopurin-9-yl)oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) Nc1ncnc2n(cnc12)[C@H]3CC[C@@H](CO[P](O)(O)=O)O3
SMILES (CACTVS) Nc1ncnc2n(cnc12)[CH]3CC[CH](CO[P](O)(O)=O)O3
Stereo SMILES (OpenEye) c1nc(c2c(n1)n(cn2)[C@H]3CC[C@H](O3)COP(=O)(O)O)N
InChI descriptor InChI=1S/C10H14N5O5P/c11-9-8-10(13-4-12-9)15(5-14-8)7-2-1-6(20-7)3-19-21(16,17)18/h4-7H,1-3H2,(H2,11,12,13)(H2,16,17,18)/t6-,7+/m0/s1
InChIKey descriptor PUSXDQXVJDGIBK-NKWVEPMBSA-N

Status Information

Last modified 2011-06-04
Created 1999-07-08
Release status REL
Model PDB code 1QSY
Processing site EBI