PDB Chemical Component 2BX
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 2BX
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N |
C6 |
1.467 |
1.470 |
N |
C5 |
1.471 |
1.470 |
C8 |
C5 |
1.528 |
1.530 |
C6 |
C3 |
1.535 |
1.530 |
C5 |
C4 |
1.537 |
1.531 |
C5 |
C7 |
1.536 |
1.531 |
C3 |
C2 |
1.529 |
1.530 |
C3 |
O3 |
1.436 |
1.431 |
C4 |
O3 |
1.445 |
1.430 |
O1 |
C1 |
1.241 |
1.208 |
C2 |
C1 |
1.506 |
1.507 |
C1 |
O2 |
1.320 |
1.342 |
O2 |
H1 |
0.950 |
0.967 |
C2 |
H2 |
1.100 |
1.090 |
C2 |
H3 |
1.100 |
1.090 |
C3 |
H4 |
1.100 |
1.090 |
C6 |
H5 |
1.100 |
1.090 |
C6 |
H6 |
1.100 |
1.090 |
N |
H7 |
1.000 |
1.009 |
C8 |
H9 |
1.100 |
1.090 |
C8 |
H10 |
1.101 |
1.091 |
C8 |
H11 |
1.100 |
1.091 |
C7 |
H12 |
1.100 |
1.091 |
C7 |
H13 |
1.100 |
1.089 |
C7 |
H14 |
1.100 |
1.090 |
C4 |
H15 |
1.100 |
1.090 |
C4 |
H16 |
1.099 |
1.089 |
Bond Angles for 2BX
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
N |
C6 |
H5 |
109.3 |
109.5 |
N |
C6 |
H6 |
109.3 |
109.5 |
N |
C5 |
C4 |
109.7 |
109.3 |
N |
C5 |
C7 |
111.3 |
109.5 |
C5 |
N |
H7 |
106.0 |
111.0 |
C8 |
C5 |
C4 |
109.2 |
109.5 |
C8 |
C5 |
C7 |
109.4 |
109.5 |
C6 |
C3 |
O3 |
114.3 |
109.3 |
C6 |
C3 |
H4 |
107.6 |
109.6 |
C7 |
C5 |
C4 |
109.3 |
109.5 |
C5 |
C4 |
O3 |
109.1 |
109.3 |
C5 |
C4 |
H15 |
109.6 |
109.5 |
C5 |
C4 |
H16 |
109.6 |
109.5 |
C5 |
C7 |
H12 |
109.5 |
109.4 |
C5 |
C7 |
H13 |
109.5 |
109.5 |
C5 |
C7 |
H14 |
109.5 |
109.4 |
C3 |
C2 |
H2 |
109.0 |
109.4 |
C3 |
C2 |
H3 |
109.0 |
109.5 |
C3 |
O3 |
C4 |
115.4 |
113.8 |
O3 |
C3 |
H4 |
108.8 |
109.4 |
O3 |
C4 |
H15 |
109.6 |
109.5 |
O3 |
C4 |
H16 |
109.6 |
109.6 |
O1 |
C1 |
O2 |
115.9 |
120.0 |
C1 |
O2 |
H1 |
109.5 |
117.0 |
H2 |
C2 |
H3 |
109.5 |
109.5 |
H5 |
C6 |
H6 |
109.5 |
109.5 |
H9 |
C8 |
H10 |
109.5 |
109.5 |
H9 |
C8 |
H11 |
109.5 |
109.4 |
H10 |
C8 |
H11 |
109.5 |
109.4 |
H12 |
C7 |
H13 |
109.4 |
109.5 |
H12 |
C7 |
H14 |
109.5 |
109.5 |
H13 |
C7 |
H14 |
109.5 |
109.5 |
H15 |
C4 |
H16 |
109.5 |
109.5 |
Torsion Angles for 2BX
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
N |
C6 |
C3 |
O3 |
37.1 |
56.8 |
N |
C6 |
C3 |
H4 |
276.2 |
296.9 |
H5 |
C6 |
N |
H6 |
240.2 |
120.1 |
C5 |
N |
C6 |
H5 |
85.5 |
181.5 |
C5 |
N |
C6 |
H6 |
205.3 |
61.4 |
C8 |
C5 |
N |
C4 |
118.9 |
120.0 |
C8 |
C5 |
N |
C7 |
240.0 |
239.9 |
C7 |
C5 |
N |
C4 |
238.9 |
240.0 |
N |
C5 |
C4 |
O3 |
309.1 |
303.2 |
N |
C5 |
C4 |
H15 |
69.1 |
63.1 |
N |
C5 |
C4 |
H16 |
189.2 |
183.2 |
N |
C5 |
C7 |
H12 |
180.0 |
60.0 |
N |
C5 |
C7 |
H13 |
300.0 |
180.0 |
N |
C5 |
C7 |
H14 |
60.0 |
300.0 |
N |
C5 |
C8 |
C4 |
240.9 |
240.2 |
N |
C5 |
C8 |
C7 |
121.2 |
120.1 |
C8 |
C5 |
N |
H7 |
39.4 |
54.8 |
C7 |
C5 |
C8 |
C4 |
119.6 |
120.1 |
C8 |
C5 |
C4 |
O3 |
191.1 |
183.2 |
C8 |
C5 |
C4 |
H15 |
311.1 |
303.1 |
C8 |
C5 |
C4 |
H16 |
71.2 |
63.2 |
C8 |
C5 |
C7 |
H12 |
299.2 |
180.1 |
C8 |
C5 |
C7 |
H13 |
59.1 |
300.1 |
C8 |
C5 |
C7 |
H14 |
179.1 |
60.1 |
C6 |
C3 |
C2 |
H2 |
275.0 |
55.2 |
C6 |
C3 |
C2 |
H3 |
34.4 |
295.3 |
C6 |
C3 |
O3 |
C4 |
305.8 |
301.4 |
O3 |
C3 |
C6 |
H4 |
120.9 |
119.9 |
N |
C5 |
C4 |
C7 |
237.7 |
240.0 |
C4 |
C5 |
N |
H7 |
280.5 |
294.8 |
C8 |
C5 |
C4 |
C7 |
119.7 |
120.1 |
C4 |
C5 |
C7 |
H12 |
58.7 |
300.2 |
C4 |
C5 |
C7 |
H13 |
178.7 |
60.2 |
C4 |
C5 |
C7 |
H14 |
298.7 |
180.2 |
C3 |
O3 |
C4 |
C5 |
60.5 |
58.6 |
O3 |
C4 |
C5 |
H15 |
240.0 |
240.1 |
O3 |
C4 |
C5 |
H16 |
120.0 |
120.0 |
H15 |
C4 |
C5 |
H16 |
239.9 |
239.9 |
N |
C5 |
C7 |
C4 |
121.3 |
119.8 |
C7 |
C5 |
N |
H7 |
159.4 |
174.9 |
C8 |
C5 |
C7 |
C4 |
240.4 |
239.9 |
C7 |
C5 |
C4 |
O3 |
71.4 |
63.2 |
C7 |
C5 |
C4 |
H15 |
191.4 |
183.0 |
C7 |
C5 |
C4 |
H16 |
311.5 |
303.2 |
H12 |
C7 |
C5 |
H13 |
240.0 |
240.0 |
H12 |
C7 |
C5 |
H14 |
120.0 |
120.0 |
H13 |
C7 |
C5 |
H14 |
240.0 |
240.0 |
H2 |
C2 |
C3 |
H3 |
240.6 |
120.0 |
C6 |
C3 |
O3 |
H4 |
239.8 |
240.0 |
C5 |
C4 |
O3 |
C3 |
60.5 |
58.6 |
O3 |
C3 |
C2 |
H2 |
40.6 |
175.0 |
O3 |
C3 |
C2 |
H3 |
160.0 |
55.1 |
C3 |
O3 |
C4 |
H15 |
300.5 |
298.7 |
C3 |
O3 |
C4 |
H16 |
180.4 |
178.6 |
C5 |
C4 |
O3 |
H15 |
120.0 |
119.9 |
C5 |
C4 |
O3 |
H16 |
240.0 |
240.0 |
C4 |
O3 |
C3 |
H4 |
66.1 |
61.4 |
H15 |
C4 |
O3 |
H16 |
120.1 |
120.1 |
O1 |
C1 |
O2 |
H1 |
0.0 |
360.0 |
C2 |
C1 |
O2 |
H1 |
179.3 |
180.3 |
C3 |
C2 |
H2 |
H3 |
119.1 |
240.0 |
C3 |
C2 |
H3 |
H2 |
240.9 |
120.0 |
C6 |
C3 |
H4 |
O3 |
124.3 |
119.8 |
H4 |
C3 |
C2 |
H2 |
157.9 |
295.0 |
H4 |
C3 |
C2 |
H3 |
277.3 |
175.0 |
H4 |
C3 |
O3 |
C4 |
66.1 |
61.4 |
N |
C6 |
H5 |
H6 |
119.7 |
239.9 |
H5 |
C6 |
C3 |
O3 |
277.0 |
176.7 |
H5 |
C6 |
C3 |
H4 |
156.1 |
56.8 |
N |
C6 |
H6 |
H5 |
240.4 |
120.1 |
H6 |
C6 |
C3 |
O3 |
157.2 |
296.9 |
H6 |
C6 |
C3 |
H4 |
36.3 |
176.9 |
H7 |
N |
C6 |
H5 |
207.4 |
305.2 |
H7 |
N |
C6 |
H6 |
327.2 |
185.1 |
H7 |
N |
C5 |
C4 |
280.5 |
294.8 |
H7 |
N |
C5 |
C7 |
159.4 |
174.9 |
H9 |
C8 |
C5 |
C4 |
299.1 |
179.8 |
H9 |
C8 |
C5 |
C7 |
58.8 |
299.8 |
H10 |
C8 |
H9 |
H11 |
120.0 |
119.9 |
H10 |
C8 |
C5 |
C4 |
59.1 |
299.9 |
H10 |
C8 |
C5 |
C7 |
178.8 |
59.9 |
H9 |
C8 |
H10 |
H11 |
240.0 |
240.1 |
H11 |
C8 |
C5 |
C4 |
179.1 |
59.8 |
H11 |
C8 |
C5 |
C7 |
298.8 |
179.9 |
H9 |
C8 |
H11 |
H10 |
120.0 |
120.0 |
H12 |
C7 |
C5 |
C4 |
58.7 |
300.2 |
C5 |
C7 |
H12 |
H13 |
120.0 |
120.0 |
C5 |
C7 |
H12 |
H14 |
240.0 |
240.0 |
H13 |
C7 |
H12 |
H14 |
120.0 |
120.1 |
H13 |
C7 |
C5 |
C4 |
178.7 |
60.2 |
C5 |
C7 |
H13 |
H12 |
240.0 |
240.0 |
C5 |
C7 |
H13 |
H14 |
120.0 |
120.0 |
H12 |
C7 |
H13 |
H14 |
240.0 |
240.0 |
H14 |
C7 |
C5 |
C4 |
298.7 |
180.2 |
C5 |
C7 |
H14 |
H12 |
120.0 |
119.9 |
C5 |
C7 |
H14 |
H13 |
240.0 |
240.0 |
H12 |
C7 |
H14 |
H13 |
119.9 |
120.0 |
C5 |
C4 |
H15 |
O3 |
240.3 |
240.3 |
C5 |
C4 |
H15 |
H16 |
120.2 |
120.1 |
O3 |
C4 |
H15 |
H16 |
239.9 |
239.9 |
C5 |
C4 |
H16 |
O3 |
119.7 |
119.8 |
C5 |
C4 |
H16 |
H15 |
239.8 |
239.9 |
O3 |
C4 |
H16 |
H15 |
120.1 |
120.1 |