PDB Chemical Component 2BU

Ideal Model

Chemical Description

Name (2S,3S)-N6-(2,3,4-TRIHYDROXYBUTYL)-2'-DEOXYADENOSINE MONO PHOSPHORIC ACID
Formula C14 H22 N5 O9 P
Formal charge 0
Molecular weight 435.326 g/mol
Component type DNA LINKING
Nonstandard Parent Id DA

Chemical features

Atom count 51
Chiral atom count 5
Chiral atoms C4' C1' CB2 CB3 C3'
Observed leaving atoms OP3 HO3 HO3'
Bond count 53
Aromatic bond count 10

Chemical Identifiers

Systematic name (ACDLabs) 2'-deoxy-N-[(2R,3S)-2,3,4-trihydroxybutyl]adenosine 5'-(dihydrogen phosphate)
Systematic name (OpenEye OEToolkits) [(2R,3S,5R)-3-hydroxy-5-[6-[[(2R,3S)-2,3,4-trihydroxybutyl]amino]purin-9-yl]oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) OC[C@H](O)[C@H](O)CNc1ncnc2n(cnc12)[C@H]3C[C@H](O)[C@@H](CO[P](O)(O)=O)O3
SMILES (CACTVS) OC[CH](O)[CH](O)CNc1ncnc2n(cnc12)[CH]3C[CH](O)[CH](CO[P](O)(O)=O)O3
Stereo SMILES (OpenEye) c1nc(c2c(n1)n(cn2)[C@H]3C[C@@H]([C@H](O3)COP(=O)(O)O)O)NC[C@H]([C@H](CO)O)O
InChI descriptor InChI=1S/C14H22N5O9P/c20-3-9(23)8(22)2-15-13-12-14(17-5-16-13)19(6-18-12)11-1-7(21)10(28-11)4-27-29(24,25)26/h5-11,20-23H,1-4H2,(H,15,16,17)(H2,24,25,26)/t7-,8+,9-,10+,11+/m0/s1
InChIKey descriptor AIFKZZYQDFSUSI-OGBGREFGSA-N

Status Information

Last modified 2011-06-04
Created 2004-08-02
Release status REL
Model PDB code 1U6O
Processing site RCSB