PDB Chemical Component 29V
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 29V
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C19 |
C9 |
1.540 |
1.508 |
| C10 |
C9 |
1.377 |
1.332 |
| C10 |
C11 |
1.476 |
1.507 |
| C9 |
C8 |
1.466 |
1.466 |
| C12 |
C11 |
1.403 |
1.507 |
| C12 |
C13 |
1.440 |
1.310 |
| C14 |
C13 |
1.413 |
1.507 |
| C14 |
C15 |
1.453 |
1.507 |
| C13 |
C20 |
1.530 |
1.507 |
| C8 |
C7 |
1.400 |
1.345 |
| O1 |
C15 |
1.262 |
1.208 |
| C15 |
O2 |
1.243 |
1.343 |
| C7 |
C2' |
1.527 |
1.514 |
| C7 |
C6 |
1.467 |
1.478 |
| C1 |
C6 |
1.392 |
1.397 |
| C1 |
C2 |
1.397 |
1.379 |
| C2' |
C1' |
1.535 |
1.535 |
| C6 |
C5 |
1.379 |
1.395 |
| C2 |
C3 |
1.387 |
1.384 |
| C1' |
C18 |
1.528 |
1.526 |
| C5 |
C18 |
1.536 |
1.505 |
| C5 |
C4 |
1.404 |
1.384 |
| C3 |
C4 |
1.385 |
1.383 |
| C18 |
C4' |
1.529 |
1.530 |
| C4' |
H1 |
1.100 |
1.090 |
| C4' |
H2 |
1.100 |
1.090 |
| C4' |
H3 |
1.100 |
1.091 |
| C1' |
H4 |
1.100 |
1.090 |
| C1' |
H5 |
1.100 |
1.089 |
| C2' |
H6 |
1.100 |
1.090 |
| C2' |
H7 |
1.099 |
1.090 |
| C8 |
H8 |
1.080 |
1.081 |
| C4 |
H9 |
1.080 |
1.079 |
| C2 |
H10 |
1.080 |
1.080 |
| C18 |
H11 |
1.100 |
1.090 |
| C3 |
H12 |
1.080 |
1.080 |
| C1 |
H13 |
1.080 |
1.080 |
| C19 |
H14 |
1.100 |
1.090 |
| C19 |
H15 |
1.100 |
1.090 |
| C19 |
H16 |
1.100 |
1.089 |
| C10 |
H17 |
1.080 |
1.080 |
| C11 |
H18 |
1.100 |
1.090 |
| C11 |
H19 |
1.100 |
1.090 |
| C12 |
H20 |
1.080 |
1.080 |
| C20 |
H21 |
1.100 |
1.090 |
| C20 |
H22 |
1.100 |
1.090 |
| C20 |
H23 |
1.100 |
1.090 |
| C14 |
H24 |
1.100 |
1.090 |
| C14 |
H25 |
1.100 |
1.090 |
| O2 |
H26 |
0.950 |
0.967 |
Bond Angles for 29V
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C11 |
C10 |
H17 |
115.6 |
120.0 |
| C10 |
C11 |
H18 |
108.1 |
109.5 |
| C10 |
C11 |
H19 |
108.1 |
109.5 |
| C9 |
C8 |
H8 |
117.6 |
119.9 |
| C12 |
C11 |
H18 |
108.1 |
109.5 |
| C12 |
C11 |
H19 |
108.1 |
109.4 |
| C12 |
C13 |
C20 |
121.4 |
120.0 |
| C13 |
C12 |
H20 |
117.3 |
120.0 |
| C14 |
C15 |
O2 |
119.4 |
120.0 |
| C15 |
C14 |
H24 |
106.2 |
109.4 |
| C15 |
C14 |
H25 |
106.2 |
109.5 |
| C13 |
C20 |
H21 |
109.5 |
109.4 |
| C13 |
C20 |
H22 |
109.4 |
109.5 |
| C13 |
C20 |
H23 |
109.5 |
109.5 |
| C8 |
C7 |
C6 |
115.9 |
121.2 |
| C7 |
C8 |
H8 |
117.6 |
120.1 |
| O1 |
C15 |
O2 |
123.1 |
120.0 |
| C15 |
O2 |
H26 |
109.5 |
117.0 |
| C7 |
C2' |
H6 |
108.9 |
109.9 |
| C7 |
C2' |
H7 |
108.9 |
110.0 |
| C1 |
C2 |
H10 |
120.2 |
120.1 |
| C2' |
C1' |
C18 |
111.3 |
109.4 |
| C2' |
C1' |
H4 |
109.0 |
109.4 |
| C2' |
C1' |
H5 |
109.0 |
109.5 |
| C6 |
C5 |
C18 |
121.9 |
121.6 |
| C6 |
C5 |
C4 |
118.5 |
119.3 |
| C3 |
C2 |
H10 |
120.2 |
120.0 |
| C2 |
C3 |
H12 |
119.7 |
119.8 |
| C1' |
C18 |
C5 |
110.6 |
111.3 |
| C18 |
C1' |
H4 |
109.0 |
109.5 |
| C18 |
C1' |
H5 |
109.0 |
109.5 |
| C1' |
C18 |
H11 |
108.7 |
109.1 |
| C4 |
C5 |
C18 |
119.6 |
119.1 |
| C5 |
C18 |
H11 |
108.6 |
109.1 |
| C5 |
C4 |
H9 |
119.9 |
119.8 |
| C3 |
C4 |
H9 |
119.8 |
119.8 |
| C18 |
C4' |
H1 |
109.5 |
109.5 |
| C18 |
C4' |
H2 |
109.5 |
109.5 |
| C18 |
C4' |
H3 |
109.5 |
109.4 |
| H1 |
C4' |
H2 |
109.5 |
109.5 |
| H1 |
C4' |
H3 |
109.5 |
109.4 |
| H2 |
C4' |
H3 |
109.5 |
109.4 |
| H4 |
C1' |
H5 |
109.4 |
109.5 |
| H6 |
C2' |
H7 |
109.5 |
109.9 |
| H14 |
C19 |
H15 |
109.5 |
109.4 |
| H14 |
C19 |
H16 |
109.5 |
109.5 |
| H15 |
C19 |
H16 |
109.4 |
109.5 |
| H18 |
C11 |
H19 |
109.5 |
109.5 |
| H21 |
C20 |
H22 |
109.4 |
109.5 |
| H21 |
C20 |
H23 |
109.5 |
109.5 |
| H22 |
C20 |
H23 |
109.5 |
109.5 |
| H24 |
C14 |
H25 |
109.5 |
109.5 |
Torsion Angles for 29V
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C19 |
C9 |
C8 |
H8 |
303.4 |
120.2 |
| C10 |
C9 |
C8 |
H8 |
123.4 |
300.1 |
| C12 |
C11 |
C10 |
H18 |
239.2 |
240.0 |
| C12 |
C11 |
C10 |
H19 |
120.8 |
120.0 |
| H18 |
C11 |
C10 |
H19 |
241.6 |
240.0 |
| C7 |
C8 |
C9 |
H8 |
180.0 |
180.0 |
| C12 |
C11 |
C10 |
H17 |
358.4 |
298.6 |
| C10 |
C11 |
C12 |
H18 |
120.8 |
120.0 |
| C10 |
C11 |
C12 |
H19 |
239.2 |
240.0 |
| H18 |
C11 |
C12 |
H19 |
118.4 |
120.0 |
| C13 |
C12 |
C11 |
H18 |
60.1 |
357.6 |
| C13 |
C12 |
C11 |
H19 |
301.7 |
237.6 |
| C12 |
C13 |
C20 |
H21 |
180.0 |
84.1 |
| C12 |
C13 |
C20 |
H22 |
300.0 |
204.1 |
| C12 |
C13 |
C20 |
H23 |
60.0 |
324.2 |
| C14 |
C13 |
C12 |
H20 |
350.1 |
0.1 |
| C14 |
C13 |
C20 |
H21 |
358.3 |
264.1 |
| C14 |
C13 |
C20 |
H22 |
118.3 |
24.1 |
| C14 |
C13 |
C20 |
H23 |
238.3 |
144.1 |
| O1 |
C15 |
C14 |
O2 |
181.9 |
180.0 |
| C14 |
C15 |
O2 |
H26 |
182.0 |
180.0 |
| H24 |
C14 |
C15 |
H25 |
116.5 |
120.0 |
| C20 |
C13 |
C12 |
H20 |
168.4 |
180.1 |
| H21 |
C20 |
C13 |
H22 |
240.0 |
240.0 |
| H21 |
C20 |
C13 |
H23 |
120.0 |
120.0 |
| H22 |
C20 |
C13 |
H23 |
240.0 |
240.0 |
| C9 |
C8 |
C7 |
H8 |
180.0 |
180.0 |
| C8 |
C7 |
C2' |
H6 |
316.8 |
103.1 |
| C8 |
C7 |
C2' |
H7 |
76.1 |
342.0 |
| C14 |
C15 |
O1 |
O2 |
178.0 |
180.0 |
| O1 |
C15 |
C14 |
H24 |
30.8 |
240.0 |
| O1 |
C15 |
C14 |
H25 |
274.3 |
120.0 |
| O1 |
C15 |
O2 |
H26 |
360.0 |
0.0 |
| O2 |
C15 |
C14 |
H24 |
208.9 |
60.0 |
| O2 |
C15 |
C14 |
H25 |
92.4 |
300.0 |
| C7 |
C2' |
C1' |
H4 |
73.9 |
56.0 |
| C7 |
C2' |
C1' |
H5 |
193.3 |
176.0 |
| H6 |
C2' |
C7 |
H7 |
240.7 |
121.1 |
| C6 |
C7 |
C8 |
H8 |
0.8 |
356.5 |
| C6 |
C7 |
C2' |
H6 |
136.9 |
283.0 |
| C6 |
C7 |
C2' |
H7 |
256.3 |
162.0 |
| C8 |
C7 |
C6 |
C1 |
10.7 |
348.8 |
| C3 |
C2 |
C1 |
H10 |
180.0 |
180.0 |
| C1 |
C2 |
C3 |
H12 |
179.3 |
180.1 |
| C2' |
C1' |
C18 |
C5 |
55.4 |
54.6 |
| C18 |
C1' |
C2' |
H4 |
239.7 |
240.0 |
| C18 |
C1' |
C2' |
H5 |
120.3 |
120.0 |
| C2' |
C1' |
C18 |
H11 |
296.2 |
294.2 |
| H4 |
C1' |
C2' |
H5 |
240.6 |
239.9 |
| C8 |
C7 |
C6 |
C5 |
185.0 |
168.5 |
| C1' |
C18 |
C5 |
C6 |
324.6 |
337.3 |
| C4 |
C5 |
C6 |
C18 |
180.5 |
180.0 |
| C6 |
C5 |
C18 |
H11 |
83.8 |
97.8 |
| C6 |
C5 |
C4 |
H9 |
180.6 |
179.8 |
| C1 |
C2 |
C3 |
H10 |
180.0 |
180.0 |
| C2 |
C3 |
C4 |
H9 |
179.9 |
180.0 |
| C2' |
C1' |
C18 |
H4 |
120.3 |
119.9 |
| C2' |
C1' |
C18 |
H5 |
239.7 |
240.0 |
| C6 |
C5 |
C18 |
C1' |
324.6 |
337.3 |
| C4 |
C5 |
C18 |
C1' |
144.1 |
157.3 |
| C5 |
C18 |
C1' |
H11 |
119.2 |
120.4 |
| C1' |
C18 |
C4' |
H1 |
180.0 |
59.9 |
| C1' |
C18 |
C4' |
H2 |
300.0 |
180.0 |
| C1' |
C18 |
C4' |
H3 |
60.0 |
300.0 |
| H4 |
C1' |
C18 |
H5 |
119.5 |
120.1 |
| C6 |
C5 |
C18 |
C4 |
180.5 |
180.0 |
| C5 |
C18 |
C1' |
H4 |
295.1 |
294.7 |
| C5 |
C18 |
C1' |
H5 |
175.7 |
174.6 |
| C1' |
C18 |
C5 |
H11 |
240.7 |
239.6 |
| C18 |
C5 |
C4 |
H9 |
1.0 |
359.8 |
| C5 |
C18 |
C4' |
H1 |
302.2 |
181.7 |
| C5 |
C18 |
C4' |
H2 |
62.2 |
301.8 |
| C5 |
C18 |
C4' |
H3 |
182.2 |
61.8 |
| C6 |
C5 |
C4 |
C18 |
179.6 |
180.0 |
| C1' |
C18 |
C5 |
C4 |
144.1 |
157.3 |
| C4 |
C5 |
C18 |
H11 |
263.4 |
277.8 |
| C3 |
C4 |
C5 |
H9 |
180.0 |
180.0 |
| C5 |
C4 |
C3 |
H9 |
180.0 |
180.0 |
| H1 |
C4' |
C18 |
H2 |
240.0 |
239.9 |
| H1 |
C4' |
C18 |
H3 |
120.0 |
119.9 |
| H2 |
C4' |
C18 |
H3 |
240.0 |
240.1 |
| C18 |
C4' |
H1 |
H2 |
120.0 |
120.1 |
| C18 |
C4' |
H1 |
H3 |
240.0 |
240.1 |
| H2 |
C4' |
H1 |
H3 |
120.0 |
120.0 |
| C18 |
C4' |
H2 |
H1 |
239.9 |
239.9 |
| C18 |
C4' |
H2 |
H3 |
120.0 |
119.9 |
| H1 |
C4' |
H2 |
H3 |
240.0 |
240.0 |
| C18 |
C4' |
H3 |
H1 |
120.0 |
120.0 |
| C18 |
C4' |
H3 |
H2 |
240.0 |
240.0 |
| H1 |
C4' |
H3 |
H2 |
120.0 |
120.0 |
| C2' |
C1' |
H4 |
C18 |
238.3 |
240.1 |
| C2' |
C1' |
H4 |
H5 |
119.1 |
120.0 |
| H4 |
C1' |
C18 |
C5 |
295.1 |
294.7 |
| C18 |
C1' |
H4 |
H5 |
240.8 |
239.9 |
| H4 |
C1' |
C18 |
H11 |
175.9 |
174.3 |
| C2' |
C1' |
H5 |
C18 |
121.7 |
119.9 |
| C2' |
C1' |
H5 |
H4 |
240.9 |
240.0 |
| H5 |
C1' |
C18 |
C5 |
175.7 |
174.6 |
| C18 |
C1' |
H5 |
H4 |
119.2 |
120.1 |
| H5 |
C1' |
C18 |
H11 |
56.5 |
54.1 |
| C7 |
C2' |
H6 |
H7 |
119.0 |
238.9 |
| H6 |
C2' |
C1' |
C18 |
193.3 |
55.5 |
| H6 |
C2' |
C1' |
H4 |
313.6 |
175.4 |
| H6 |
C2' |
C1' |
H5 |
73.0 |
295.5 |
| C7 |
C2' |
H7 |
H6 |
241.0 |
121.0 |
| H7 |
C2' |
C1' |
C18 |
74.0 |
176.4 |
| H7 |
C2' |
C1' |
H4 |
194.3 |
296.4 |
| H7 |
C2' |
C1' |
H5 |
313.7 |
56.5 |
| H8 |
C8 |
C7 |
C6 |
0.8 |
356.5 |
| H9 |
C4 |
C5 |
C18 |
1.0 |
359.8 |
| H10 |
C2 |
C3 |
H12 |
359.3 |
0.1 |
| C1' |
C18 |
H11 |
C5 |
120.5 |
121.8 |
| H11 |
C18 |
C1' |
H4 |
175.9 |
174.3 |
| H11 |
C18 |
C1' |
H5 |
56.5 |
54.1 |
| H11 |
C18 |
C4' |
H1 |
61.1 |
300.8 |
| H11 |
C18 |
C4' |
H2 |
181.2 |
60.9 |
| H11 |
C18 |
C4' |
H3 |
301.2 |
180.9 |
| H12 |
C3 |
C2 |
H10 |
359.3 |
0.1 |
| H12 |
C3 |
C4 |
H9 |
359.9 |
360.0 |
| H13 |
C1 |
C2 |
H10 |
1.0 |
0.1 |
| H15 |
C19 |
H14 |
H16 |
120.0 |
120.0 |
| H14 |
C19 |
H15 |
H16 |
240.0 |
240.0 |
| H14 |
C19 |
H16 |
H15 |
120.0 |
120.0 |
| H17 |
C10 |
C11 |
H18 |
119.2 |
58.6 |
| H17 |
C10 |
C11 |
H19 |
237.6 |
178.6 |
| H18 |
C11 |
C10 |
H17 |
119.2 |
58.6 |
| C10 |
C11 |
H18 |
H19 |
117.5 |
120.1 |
| C12 |
C11 |
H18 |
H19 |
242.5 |
240.0 |
| H19 |
C11 |
C10 |
H17 |
237.6 |
178.6 |
| C10 |
C11 |
H19 |
H18 |
242.5 |
240.0 |
| C12 |
C11 |
H19 |
H18 |
117.5 |
120.0 |
| H20 |
C12 |
C11 |
H18 |
240.2 |
177.6 |
| H20 |
C12 |
C11 |
H19 |
121.8 |
57.6 |
| H20 |
C12 |
C13 |
C20 |
168.4 |
180.1 |
| C13 |
C20 |
H21 |
H22 |
120.0 |
120.0 |
| C13 |
C20 |
H21 |
H23 |
240.0 |
240.1 |
| H22 |
C20 |
H21 |
H23 |
120.0 |
120.1 |
| C13 |
C20 |
H22 |
H21 |
240.0 |
240.1 |
| C13 |
C20 |
H22 |
H23 |
120.0 |
120.0 |
| H21 |
C20 |
H22 |
H23 |
240.0 |
239.9 |
| C13 |
C20 |
H23 |
H21 |
120.0 |
119.9 |
| C13 |
C20 |
H23 |
H22 |
240.0 |
240.0 |
| H21 |
C20 |
H23 |
H22 |
120.0 |
120.1 |
| H24 |
C14 |
C15 |
O2 |
208.9 |
60.0 |
| C15 |
C14 |
H24 |
H25 |
245.8 |
240.0 |
| H25 |
C14 |
C15 |
O2 |
92.4 |
300.0 |
| C15 |
C14 |
H25 |
H24 |
114.2 |
120.0 |