PDB Chemical Component 28F
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 28F
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C1 |
C2 |
1.520 |
1.530 |
| C2 |
N3 |
1.440 |
1.465 |
| N3 |
C4 |
1.379 |
1.348 |
| C4 |
O5 |
1.235 |
1.216 |
| C4 |
N6 |
1.384 |
1.348 |
| N6 |
C7 |
1.386 |
1.385 |
| C7 |
S15 |
1.760 |
1.758 |
| C7 |
N8 |
1.318 |
1.287 |
| S15 |
C14 |
1.750 |
1.763 |
| N8 |
C9 |
1.371 |
1.348 |
| C9 |
C14 |
1.387 |
1.399 |
| C9 |
C10 |
1.392 |
1.410 |
| C14 |
N13 |
1.334 |
1.331 |
| C10 |
C11 |
1.385 |
1.388 |
| N13 |
C12 |
1.349 |
1.317 |
| C12 |
C11 |
1.412 |
1.403 |
| C12 |
O16 |
1.366 |
1.357 |
| C11 |
C23 |
1.486 |
1.483 |
| O16 |
C17 |
1.418 |
1.429 |
| C23 |
C24 |
1.383 |
1.398 |
| C23 |
C28 |
1.381 |
1.397 |
| C17 |
C18 |
1.526 |
1.530 |
| C24 |
N25 |
1.347 |
1.322 |
| C22 |
O21 |
1.433 |
1.448 |
| C22 |
C18 |
1.495 |
1.550 |
| O21 |
C20 |
1.438 |
1.438 |
| C28 |
N27 |
1.348 |
1.322 |
| C18 |
C19 |
1.507 |
1.548 |
| N25 |
C26 |
1.341 |
1.319 |
| C20 |
C19 |
1.520 |
1.541 |
| N27 |
C26 |
1.340 |
1.318 |
| C1 |
H1 |
1.100 |
1.089 |
| C1 |
H2 |
1.100 |
1.091 |
| C1 |
H3 |
1.100 |
1.090 |
| C2 |
H4 |
1.100 |
1.090 |
| C2 |
H5 |
1.100 |
1.091 |
| N6 |
H6 |
1.000 |
0.971 |
| C10 |
H7 |
1.080 |
1.081 |
| C19 |
H8 |
1.099 |
1.090 |
| C19 |
H9 |
1.100 |
1.091 |
| C20 |
H10 |
1.100 |
1.090 |
| C20 |
H11 |
1.100 |
1.090 |
| C22 |
H12 |
1.100 |
1.090 |
| C22 |
H13 |
1.100 |
1.090 |
| C24 |
H14 |
1.080 |
1.081 |
| N3 |
H15 |
1.000 |
0.970 |
| C17 |
H16 |
1.100 |
1.090 |
| C17 |
H17 |
1.100 |
1.090 |
| C18 |
H18 |
1.100 |
1.091 |
| C26 |
H19 |
1.080 |
1.080 |
| C28 |
H20 |
1.080 |
1.081 |
Bond Angles for 28F
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C1 |
C2 |
N3 |
109.6 |
109.5 |
| C2 |
C1 |
H1 |
109.5 |
109.5 |
| C2 |
C1 |
H2 |
109.5 |
109.4 |
| C2 |
C1 |
H3 |
109.4 |
109.5 |
| C1 |
C2 |
H4 |
109.4 |
109.5 |
| C1 |
C2 |
H5 |
109.4 |
109.5 |
| C2 |
N3 |
C4 |
122.9 |
120.0 |
| N3 |
C2 |
H4 |
109.4 |
109.5 |
| N3 |
C2 |
H5 |
109.5 |
109.4 |
| C2 |
N3 |
H15 |
118.5 |
120.0 |
| C4 |
N3 |
H15 |
118.5 |
120.0 |
| C4 |
N6 |
H6 |
119.4 |
119.9 |
| N6 |
C7 |
S15 |
121.6 |
124.8 |
| N6 |
C7 |
N8 |
121.2 |
124.8 |
| C7 |
N6 |
H6 |
119.4 |
120.0 |
| N8 |
C7 |
S15 |
117.2 |
110.4 |
| C7 |
S15 |
C14 |
86.1 |
90.5 |
| C7 |
N8 |
C9 |
110.3 |
117.8 |
| C10 |
C9 |
C14 |
117.5 |
118.1 |
| C9 |
C14 |
N13 |
126.9 |
121.0 |
| C9 |
C10 |
C11 |
119.6 |
118.9 |
| C9 |
C10 |
H7 |
120.2 |
120.6 |
| C10 |
C11 |
C23 |
121.6 |
120.4 |
| C11 |
C10 |
H7 |
120.1 |
120.6 |
| N13 |
C12 |
O16 |
117.1 |
119.8 |
| C12 |
C11 |
C23 |
122.2 |
120.3 |
| C12 |
O16 |
C17 |
122.1 |
117.0 |
| C11 |
C23 |
C24 |
124.5 |
120.9 |
| C11 |
C23 |
C28 |
121.8 |
121.0 |
| O16 |
C17 |
C18 |
104.2 |
109.5 |
| O16 |
C17 |
H16 |
110.8 |
109.5 |
| O16 |
C17 |
H17 |
110.8 |
109.5 |
| C23 |
C24 |
H14 |
118.1 |
120.6 |
| C23 |
C28 |
N27 |
125.7 |
119.0 |
| C23 |
C28 |
H20 |
117.1 |
120.5 |
| C22 |
C18 |
C17 |
109.2 |
110.9 |
| C18 |
C17 |
H16 |
110.8 |
109.4 |
| C18 |
C17 |
H17 |
110.8 |
109.5 |
| C17 |
C18 |
H18 |
110.7 |
110.8 |
| C24 |
N25 |
C26 |
116.1 |
120.9 |
| N25 |
C24 |
H14 |
118.1 |
120.5 |
| C18 |
C22 |
O21 |
103.5 |
103.5 |
| O21 |
C22 |
H12 |
111.0 |
110.6 |
| O21 |
C22 |
H13 |
110.9 |
110.6 |
| C18 |
C22 |
H12 |
110.9 |
110.7 |
| C18 |
C22 |
H13 |
111.0 |
110.5 |
| C22 |
C18 |
H18 |
111.2 |
110.9 |
| O21 |
C20 |
H10 |
110.0 |
109.9 |
| O21 |
C20 |
H11 |
110.0 |
110.0 |
| C18 |
C19 |
H8 |
111.3 |
110.5 |
| C18 |
C19 |
H9 |
111.3 |
110.4 |
| N25 |
C26 |
H19 |
116.8 |
118.9 |
| C20 |
C19 |
H8 |
111.3 |
110.5 |
| C20 |
C19 |
H9 |
111.3 |
110.5 |
| N27 |
C26 |
H19 |
116.8 |
119.0 |
| H1 |
C1 |
H2 |
109.4 |
109.5 |
| H1 |
C1 |
H3 |
109.5 |
109.5 |
| H2 |
C1 |
H3 |
109.5 |
109.4 |
| H4 |
C2 |
H5 |
109.5 |
109.4 |
| H8 |
C19 |
H9 |
109.4 |
110.5 |
| H10 |
C20 |
H11 |
109.5 |
109.9 |
| H12 |
C22 |
H13 |
109.5 |
110.7 |
| H16 |
C17 |
H17 |
109.4 |
109.5 |
Torsion Angles for 28F
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C1 |
C2 |
N3 |
C4 |
224.1 |
180.0 |
| N3 |
C2 |
C1 |
H4 |
240.0 |
239.9 |
| N3 |
C2 |
C1 |
H5 |
120.0 |
120.0 |
| C1 |
C2 |
N3 |
H15 |
44.1 |
0.1 |
| H1 |
C1 |
C2 |
H2 |
240.0 |
240.0 |
| H1 |
C1 |
C2 |
H3 |
120.0 |
120.1 |
| H2 |
C1 |
C2 |
H3 |
240.0 |
240.1 |
| H4 |
C2 |
C1 |
H5 |
240.1 |
240.1 |
| N3 |
C2 |
C1 |
H1 |
180.0 |
180.0 |
| N3 |
C2 |
C1 |
H2 |
300.0 |
300.0 |
| N3 |
C2 |
C1 |
H3 |
60.0 |
59.9 |
| C1 |
C2 |
N3 |
H4 |
120.0 |
120.1 |
| C1 |
C2 |
N3 |
H5 |
240.0 |
240.0 |
| C4 |
N3 |
C2 |
H15 |
180.0 |
179.9 |
| H4 |
C2 |
N3 |
H5 |
119.9 |
119.9 |
| C4 |
N3 |
C2 |
H4 |
104.0 |
59.9 |
| C4 |
N3 |
C2 |
H5 |
344.1 |
300.0 |
| C2 |
N3 |
C4 |
H15 |
180.0 |
180.1 |
| N3 |
C4 |
N6 |
H6 |
4.5 |
360.0 |
| C2 |
N3 |
C4 |
O5 |
351.4 |
0.1 |
| C2 |
N3 |
C4 |
N6 |
172.9 |
180.0 |
| C4 |
N6 |
C7 |
S15 |
343.3 |
360.0 |
| C4 |
N6 |
C7 |
N8 |
163.9 |
180.2 |
| C7 |
N6 |
C4 |
H6 |
180.0 |
180.1 |
| C4 |
N6 |
C7 |
H6 |
180.0 |
179.9 |
| N8 |
C7 |
N6 |
S15 |
180.6 |
180.3 |
| N6 |
C7 |
S15 |
C14 |
179.5 |
180.0 |
| N6 |
C7 |
N8 |
C9 |
180.0 |
180.0 |
| N6 |
C7 |
S15 |
N8 |
180.6 |
180.2 |
| S15 |
C7 |
N6 |
H6 |
163.3 |
180.1 |
| S15 |
C7 |
N8 |
C9 |
0.6 |
0.2 |
| N6 |
C7 |
N8 |
S15 |
179.4 |
179.8 |
| N8 |
C7 |
N6 |
H6 |
343.9 |
0.3 |
| N8 |
C7 |
S15 |
C14 |
358.9 |
359.8 |
| C9 |
N8 |
C7 |
S15 |
0.6 |
0.2 |
| N8 |
C9 |
C14 |
N13 |
180.1 |
179.8 |
| N8 |
C9 |
C10 |
H7 |
0.4 |
0.1 |
| C7 |
S15 |
C14 |
C9 |
1.3 |
0.2 |
| C7 |
N8 |
C9 |
C14 |
0.5 |
359.9 |
| C14 |
C9 |
C10 |
C11 |
359.0 |
0.0 |
| C14 |
C9 |
C10 |
H7 |
179.0 |
179.9 |
| C7 |
N8 |
C9 |
C10 |
179.1 |
179.8 |
| C10 |
C9 |
C14 |
N13 |
1.3 |
359.9 |
| C9 |
C10 |
C11 |
C23 |
179.0 |
180.0 |
| C11 |
C10 |
C9 |
H7 |
180.0 |
180.1 |
| C7 |
S15 |
C14 |
N13 |
180.0 |
180.3 |
| C14 |
N13 |
C12 |
O16 |
179.4 |
180.0 |
| C11 |
C10 |
C9 |
C14 |
359.0 |
0.0 |
| C9 |
C10 |
C11 |
H7 |
180.0 |
179.9 |
| C12 |
C11 |
C10 |
C23 |
181.5 |
180.0 |
| C10 |
C11 |
C23 |
C24 |
131.6 |
310.0 |
| C10 |
C11 |
C23 |
C28 |
311.6 |
129.9 |
| C9 |
C14 |
N13 |
C12 |
359.1 |
0.1 |
| N13 |
C12 |
C11 |
C23 |
181.4 |
180.0 |
| N13 |
C12 |
O16 |
C17 |
7.6 |
360.0 |
| C10 |
C11 |
C12 |
C23 |
178.5 |
180.0 |
| C12 |
C11 |
C10 |
H7 |
180.5 |
180.1 |
| C12 |
C11 |
C23 |
C24 |
310.0 |
129.9 |
| C12 |
C11 |
C23 |
C28 |
130.1 |
309.9 |
| O16 |
C12 |
C11 |
C23 |
2.3 |
0.0 |
| C12 |
O16 |
C17 |
C18 |
184.2 |
180.0 |
| C12 |
O16 |
C17 |
H16 |
303.3 |
300.0 |
| C12 |
O16 |
C17 |
H17 |
65.0 |
60.0 |
| C23 |
C11 |
C10 |
H7 |
359.0 |
0.1 |
| C11 |
C23 |
C24 |
H14 |
0.0 |
0.3 |
| C11 |
C23 |
C28 |
N27 |
180.2 |
179.4 |
| C11 |
C23 |
C28 |
H20 |
0.2 |
0.1 |
| C22 |
C18 |
C17 |
O16 |
117.4 |
66.4 |
| C18 |
C17 |
O16 |
H16 |
240.9 |
240.1 |
| C18 |
C17 |
O16 |
H17 |
119.2 |
120.0 |
| O16 |
C17 |
C18 |
H18 |
354.6 |
302.8 |
| H16 |
C17 |
O16 |
H17 |
238.3 |
240.0 |
| C11 |
C23 |
C24 |
C28 |
180.0 |
180.0 |
| C23 |
C24 |
N25 |
C26 |
0.0 |
0.3 |
| N25 |
C24 |
C23 |
H14 |
180.0 |
179.7 |
| C11 |
C23 |
C28 |
C24 |
180.0 |
180.0 |
| C28 |
C23 |
C24 |
H14 |
180.0 |
180.3 |
| O16 |
C17 |
C18 |
H16 |
119.2 |
120.0 |
| O16 |
C17 |
C18 |
H17 |
240.8 |
240.0 |
| C17 |
C18 |
C22 |
O21 |
76.9 |
155.2 |
| C17 |
C18 |
C22 |
H12 |
317.8 |
273.8 |
| C17 |
C18 |
C22 |
H13 |
195.9 |
36.8 |
| C22 |
C18 |
C17 |
H18 |
122.8 |
123.6 |
| C17 |
C18 |
C19 |
H8 |
36.2 |
102.1 |
| C17 |
C18 |
C19 |
H9 |
158.6 |
339.6 |
| H16 |
C17 |
C18 |
H17 |
121.6 |
120.0 |
| C11 |
C23 |
C24 |
N25 |
180.0 |
180.0 |
| C23 |
C24 |
N25 |
H14 |
180.0 |
180.3 |
| C24 |
N25 |
C26 |
H19 |
179.8 |
180.0 |
| O21 |
C22 |
C18 |
C17 |
76.9 |
155.2 |
| C18 |
C22 |
O21 |
H12 |
241.0 |
118.6 |
| C18 |
C22 |
O21 |
H13 |
119.1 |
241.6 |
| O21 |
C22 |
C18 |
H18 |
199.4 |
278.8 |
| C22 |
O21 |
C20 |
H10 |
108.7 |
267.1 |
| C22 |
O21 |
C20 |
H11 |
229.4 |
145.9 |
| H12 |
C22 |
O21 |
H13 |
238.1 |
123.0 |
| O16 |
C17 |
C18 |
C22 |
117.4 |
66.4 |
| C22 |
C18 |
C17 |
H16 |
358.2 |
306.5 |
| C22 |
C18 |
C17 |
H17 |
236.6 |
186.4 |
| C17 |
C18 |
C22 |
H18 |
237.5 |
236.4 |
| O21 |
C22 |
C18 |
H12 |
119.1 |
241.5 |
| O21 |
C22 |
C18 |
H13 |
241.0 |
118.4 |
| C22 |
C18 |
C19 |
H8 |
153.2 |
220.4 |
| C22 |
C18 |
C19 |
H9 |
275.5 |
97.9 |
| H12 |
C22 |
C18 |
H13 |
121.9 |
237.0 |
| O21 |
C20 |
C19 |
H8 |
226.0 |
116.7 |
| O21 |
C20 |
C19 |
H9 |
103.6 |
239.2 |
| H10 |
C20 |
O21 |
H11 |
239.3 |
121.1 |
| C23 |
C28 |
N27 |
H20 |
180.0 |
180.6 |
| C28 |
N27 |
C26 |
H19 |
180.4 |
179.3 |
| C20 |
C19 |
C18 |
H8 |
241.2 |
118.8 |
| C20 |
C19 |
C18 |
H9 |
118.8 |
241.3 |
| H8 |
C19 |
C18 |
H9 |
237.7 |
122.5 |
| C26 |
N25 |
C24 |
H14 |
180.0 |
180.0 |
| N27 |
C26 |
N25 |
H19 |
180.0 |
179.9 |
| C18 |
C19 |
C20 |
H8 |
118.8 |
241.2 |
| C18 |
C19 |
C20 |
H9 |
241.2 |
118.7 |
| H8 |
C19 |
C20 |
H9 |
122.3 |
237.5 |
| C23 |
C28 |
N27 |
C26 |
359.6 |
0.9 |
| N25 |
C26 |
N27 |
H19 |
180.0 |
180.1 |
| H1 |
C1 |
C2 |
N3 |
180.0 |
180.0 |
| C2 |
C1 |
H1 |
H2 |
120.0 |
120.0 |
| C2 |
C1 |
H1 |
H3 |
240.0 |
240.0 |
| H1 |
C1 |
C2 |
H4 |
300.0 |
300.0 |
| H1 |
C1 |
C2 |
H5 |
60.0 |
60.0 |
| H2 |
C1 |
H1 |
H3 |
120.0 |
120.0 |
| H2 |
C1 |
C2 |
N3 |
300.0 |
300.0 |
| C2 |
C1 |
H2 |
H1 |
240.0 |
240.0 |
| C2 |
C1 |
H2 |
H3 |
120.0 |
119.9 |
| H2 |
C1 |
C2 |
H4 |
60.0 |
60.1 |
| H2 |
C1 |
C2 |
H5 |
179.9 |
180.0 |
| H1 |
C1 |
H2 |
H3 |
240.0 |
240.0 |
| H3 |
C1 |
C2 |
N3 |
60.0 |
59.9 |
| C2 |
C1 |
H3 |
H1 |
120.0 |
120.1 |
| C2 |
C1 |
H3 |
H2 |
240.0 |
240.1 |
| H3 |
C1 |
C2 |
H4 |
180.0 |
180.0 |
| H3 |
C1 |
C2 |
H5 |
299.9 |
299.9 |
| H1 |
C1 |
H3 |
H2 |
120.0 |
120.0 |
| C1 |
C2 |
H4 |
N3 |
239.8 |
239.9 |
| H4 |
C2 |
C1 |
H1 |
300.0 |
300.0 |
| H4 |
C2 |
C1 |
H2 |
60.0 |
60.1 |
| H4 |
C2 |
C1 |
H3 |
180.0 |
180.0 |
| C1 |
C2 |
H4 |
H5 |
119.9 |
120.0 |
| H4 |
C2 |
N3 |
C4 |
104.0 |
59.9 |
| N3 |
C2 |
H4 |
H5 |
240.1 |
240.1 |
| H4 |
C2 |
N3 |
H15 |
284.0 |
240.0 |
| C1 |
C2 |
H5 |
N3 |
120.2 |
120.0 |
| H5 |
C2 |
C1 |
H1 |
60.0 |
60.0 |
| H5 |
C2 |
C1 |
H2 |
179.9 |
180.0 |
| H5 |
C2 |
C1 |
H3 |
299.9 |
299.9 |
| C1 |
C2 |
H5 |
H4 |
240.1 |
240.0 |
| H5 |
C2 |
N3 |
C4 |
344.1 |
300.0 |
| N3 |
C2 |
H5 |
H4 |
119.9 |
120.0 |
| H5 |
C2 |
N3 |
H15 |
164.1 |
120.0 |
| H6 |
N6 |
C7 |
S15 |
163.3 |
180.1 |
| H6 |
N6 |
C7 |
N8 |
343.9 |
0.3 |
| H7 |
C10 |
C9 |
C14 |
179.0 |
179.9 |
| C9 |
C10 |
H7 |
C11 |
180.0 |
180.1 |
| H7 |
C10 |
C11 |
C23 |
359.0 |
0.1 |
| C18 |
C19 |
H8 |
H9 |
123.4 |
237.5 |
| C20 |
C19 |
H8 |
H9 |
236.6 |
122.5 |
| C18 |
C19 |
H9 |
H8 |
236.6 |
122.6 |
| C20 |
C19 |
H9 |
H8 |
123.4 |
237.5 |
| O21 |
C20 |
H10 |
H11 |
120.9 |
238.8 |
| H10 |
C20 |
C19 |
H8 |
106.3 |
236.1 |
| H10 |
C20 |
C19 |
H9 |
343.9 |
358.6 |
| O21 |
C20 |
H11 |
H10 |
239.1 |
121.1 |
| H11 |
C20 |
C19 |
H8 |
345.6 |
357.1 |
| H11 |
C20 |
C19 |
H9 |
223.3 |
119.6 |
| H12 |
C22 |
C18 |
C17 |
317.8 |
273.8 |
| C18 |
C22 |
H12 |
O21 |
114.4 |
245.9 |
| O21 |
C22 |
H12 |
H13 |
122.8 |
237.0 |
| C18 |
C22 |
H12 |
H13 |
237.2 |
122.9 |
| H12 |
C22 |
C18 |
H18 |
80.3 |
37.3 |
| H13 |
C22 |
C18 |
C17 |
195.9 |
36.8 |
| C18 |
C22 |
H13 |
O21 |
245.5 |
114.0 |
| O21 |
C22 |
H13 |
H12 |
237.2 |
123.0 |
| C18 |
C22 |
H13 |
H12 |
122.8 |
237.0 |
| H13 |
C22 |
C18 |
H18 |
318.4 |
160.4 |
| H14 |
C24 |
N25 |
C26 |
180.0 |
180.0 |
| C2 |
N3 |
H15 |
C4 |
180.0 |
179.9 |
| H15 |
N3 |
C2 |
H4 |
284.0 |
240.0 |
| H15 |
N3 |
C2 |
H5 |
164.1 |
120.0 |
| O16 |
C17 |
H16 |
C18 |
244.9 |
240.0 |
| O16 |
C17 |
H16 |
H17 |
122.5 |
120.0 |
| C18 |
C17 |
H16 |
H17 |
237.6 |
240.0 |
| H16 |
C17 |
C18 |
H18 |
235.5 |
182.9 |
| O16 |
C17 |
H17 |
C18 |
115.1 |
120.0 |
| O16 |
C17 |
H17 |
H16 |
237.5 |
240.0 |
| C18 |
C17 |
H17 |
H16 |
122.4 |
120.0 |
| H17 |
C17 |
C18 |
H18 |
113.8 |
62.8 |
| C22 |
C18 |
H18 |
C17 |
238.4 |
236.4 |
| H18 |
C18 |
C17 |
H16 |
235.5 |
182.9 |
| H18 |
C18 |
C17 |
H17 |
113.8 |
62.8 |
| H18 |
C18 |
C22 |
O21 |
199.4 |
278.8 |
| H18 |
C18 |
C22 |
H12 |
80.3 |
37.3 |
| H18 |
C18 |
C22 |
H13 |
318.4 |
160.4 |
| H18 |
C18 |
C19 |
H8 |
271.8 |
338.5 |
| H18 |
C18 |
C19 |
H9 |
34.2 |
216.0 |
| C23 |
C28 |
H20 |
N27 |
180.0 |
179.4 |