PDB Chemical Component 25Z

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 25Z

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.464	1.383
C1	C6	1.438	1.384
F1	C7	1.391	1.399
N1	C10	1.362	1.302
N1	C11	1.356	1.313
O1	C8	1.347	1.219
S1	C9	1.699	1.762
S1	C10	1.706	1.709
C2	C3	1.463	1.380
C2	C7	1.434	1.508
F2	C7	1.377	1.399
N2	C10	1.343	1.377
N2	C12	1.415	1.397
C3	C4	1.469	1.395
F3	C7	1.389	1.399
N3	C11	1.363	1.386
C4	C5	1.471	1.396
C4	C8	1.401	1.480
C5	C6	1.438	1.379
C8	C9	1.525	1.407
C9	C11	1.400	1.383
C12	C13	1.484	1.390
C12	C17	1.452	1.389
C13	C14	1.445	1.380
C14	C15	1.439	1.383
C15	C16	1.437	1.384
C16	C17	1.443	1.381
C1	H1	1.079	1.080
N2	HN2	1.000	0.970
C3	H3	1.080	1.080
N3	HN3	1.000	0.969
N3	HN3A	1.000	0.970
C5	H5	1.081	1.080
C6	H6	1.080	1.079
C13	H13	1.080	1.080
C14	H14	1.080	1.080
C15	H15	1.080	1.080
C16	H16	1.080	1.080
C17	H17	1.080	1.080

Bond Angles for 25Z

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	C6	121.5	120.3
C1	C2	C3	117.2	120.1
C1	C2	C7	120.0	120.0
C2	C1	H1	119.3	119.8
C1	C6	C5	120.4	120.1
C6	C1	H1	119.3	119.8
C1	C6	H6	119.8	120.0
F1	C7	C2	111.3	109.4
F1	C7	F2	107.5	109.5
F1	C7	F3	108.3	109.5
C10	N1	C11	111.3	117.4
N1	C10	S1	113.9	110.8
N1	C10	N2	120.9	124.6
N1	C11	N3	121.7	123.2
N1	C11	C9	113.5	113.6
O1	C8	C4	118.8	120.0
O1	C8	C9	115.7	120.0
C9	S1	C10	90.1	90.6
S1	C9	C8	121.6	126.1
S1	C9	C11	111.2	107.7
S1	C10	N2	125.3	124.6
C3	C2	C7	122.8	119.9
C2	C3	C4	122.6	119.8
C2	C3	H3	118.7	120.1
C2	C7	F2	110.6	109.4
C2	C7	F3	110.7	109.4
F2	C7	F3	108.3	109.5
C10	N2	C12	129.0	120.0
C10	N2	HN2	115.5	120.0
N2	C12	C13	125.8	120.1
N2	C12	C17	117.2	120.1
C12	N2	HN2	115.5	120.1
C3	C4	C5	117.2	119.7
C3	C4	C8	121.9	120.2
C4	C3	H3	118.7	120.1
N3	C11	C9	124.8	123.2
C11	N3	HN3	109.5	120.0
C11	N3	HN3A	109.4	120.0
C5	C4	C8	120.9	120.1
C4	C5	C6	121.0	119.9
C4	C5	H5	119.5	120.1
C4	C8	C9	125.4	120.1
C6	C5	H5	119.5	120.1
C5	C6	H6	119.8	119.9
C8	C9	C11	127.2	126.2
C13	C12	C17	117.0	119.8
C12	C13	C14	121.2	120.0
C12	C13	H13	119.4	120.0
C12	C17	C16	121.5	120.0
C12	C17	H17	119.3	120.0
C13	C14	C15	119.7	120.1
C14	C13	H13	119.4	120.0
C13	C14	H14	120.2	120.0
C14	C15	C16	120.4	120.1
C15	C14	H14	120.2	119.9
C14	C15	H15	119.8	120.0
C15	C16	C17	120.3	120.0
C16	C15	H15	119.8	119.8
C15	C16	H16	119.8	120.0
C17	C16	H16	119.9	120.0
C16	C17	H17	119.3	120.0
HN3	N3	HN3A	109.5	120.0

Torsion Angles for 25Z

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	C6	C5	360.0	360.0
C6	C1	C2	H1	180.0	180.3
C2	C1	C6	H6	180.0	180.0
F1	C7	C2	C1	184.4	360.0
C3	C2	C1	C7	179.9	180.0
C1	C2	C3	C4	0.1	359.9
C1	C2	C3	H3	180.1	180.0
C1	C2	C7	F2	65.0	240.0
C1	C2	C7	F3	304.9	120.0
C6	C1	C2	C3	360.0	0.1
C6	C1	C2	C7	180.1	180.0
C2	C1	C6	H1	180.0	179.7
C4	C5	C6	C1	360.0	0.0
C1	C6	C5	H5	180.0	180.0
C5	C6	C1	H6	180.0	180.0
C1	C2	C7	F1	184.4	360.0
C3	C2	C7	F1	4.5	180.0
C2	C7	F1	F2	238.8	240.0
C2	C7	F1	F3	121.9	120.0
F2	C7	F1	F3	243.1	240.0
C10	N1	C11	N3	179.6	180.0
C10	N1	C11	C9	0.3	360.0
C9	S1	C10	N1	359.6	360.0
S1	C10	N1	N2	179.6	180.0
N1	C10	N2	C12	167.8	356.4
N1	C10	N2	HN2	347.8	176.4
C11	N1	C10	S1	0.2	0.0
C11	N1	C10	N2	180.6	180.0
S1	C9	C11	N1	359.4	360.0
N3	C11	N1	C9	179.3	180.0
N1	C11	N3	HN3	360.0	360.0
N1	C11	N3	HN3A	120.0	180.0
C8	C9	C11	N1	178.8	180.0
S1	C9	C8	O1	175.3	186.9
C3	C4	C8	O1	140.5	26.0
C5	C4	C8	O1	320.5	205.9
C4	C8	O1	C9	176.8	180.0
O1	C8	C9	C11	356.0	6.9
N1	C10	S1	C9	359.6	360.0
N1	C11	C9	S1	359.4	360.0
O1	C8	C9	S1	175.3	186.9
C9	S1	C10	N2	179.2	180.0
N3	C11	C9	S1	180.1	180.0
C4	C8	C9	S1	358.7	6.9
C8	C9	S1	C11	180.6	180.0
S1	C10	N1	C11	0.2	0.0
N1	C10	S1	N2	180.4	180.0
C10	S1	C9	C8	181.1	180.0
C10	S1	C9	C11	0.5	0.0
S1	C10	N2	C12	348.2	176.3
S1	C10	N2	HN2	168.2	356.3
C3	C2	C1	C6	360.0	0.1
C1	C2	C3	C7	180.1	180.0
C3	C2	C1	H1	180.0	179.7
F1	C7	C2	C3	4.5	180.0
C3	C2	C7	F2	245.1	59.9
C3	C2	C7	F3	125.0	300.0
C2	C3	C4	C5	359.8	0.0
C2	C3	C4	C8	179.8	180.0
C4	C3	C2	H3	180.0	180.0
C7	C2	C1	C6	180.1	180.0
C1	C2	C7	C3	179.9	180.0
C7	C2	C1	H1	0.1	359.7
F1	C7	C2	F2	119.4	120.0
F1	C7	C2	F3	239.5	240.0
C7	C2	C3	C4	180.0	180.0
C7	C2	C3	H3	360.0	360.0
F2	C7	C2	F3	120.1	120.0
F1	C7	F2	C2	238.4	240.0
F1	C7	F2	F3	116.8	120.1
C2	C7	F2	F3	238.5	240.1
N2	C10	N1	C11	180.6	180.0
N1	C10	N2	S1	179.6	180.0
C10	N2	C12	C13	333.6	148.1
C10	N2	C12	C17	153.4	327.8
C12	N2	C10	HN2	180.0	180.0
C10	N2	C12	HN2	180.0	180.0
C13	C12	N2	C17	180.1	180.3
N2	C12	C13	C14	179.8	180.0
N2	C12	C13	H13	359.8	359.9
N2	C12	C17	C16	180.1	179.8
N2	C12	C17	H17	0.1	0.0
O1	C8	C4	C3	140.5	26.0
C4	C3	C2	C7	180.0	180.0
C2	C3	C4	H3	180.0	180.0
C5	C4	C3	C8	180.0	180.1
C3	C4	C5	C6	0.1	360.0
C3	C4	C5	H5	180.1	180.0
C3	C4	C8	C9	317.0	206.0
F1	C7	F3	C2	122.3	120.0
F1	C7	F3	F2	243.7	239.9
C2	C7	F3	F2	121.4	119.9
N1	C11	N3	C9	180.8	180.0
S1	C9	C11	N3	180.1	180.0
C8	C9	C11	N3	359.6	0.0
HN3	N3	C11	HN3A	240.0	180.0
C1	C6	C5	C4	360.0	0.0
O1	C8	C4	C5	320.5	205.9
C3	C4	C5	C8	180.0	179.9
C5	C4	C3	H3	179.8	180.0
C5	C4	C8	C9	137.0	25.9
C6	C5	C4	H5	180.0	180.0
C4	C5	C6	H6	180.0	180.0
O1	C8	C4	C9	183.5	180.0
S1	C9	C8	C4	358.7	6.9
C3	C4	C8	C5	180.0	180.1
C8	C4	C3	H3	359.9	359.9
C8	C4	C5	C6	180.1	180.1
C8	C4	C5	H5	0.1	0.1
C4	C8	C9	C11	179.4	186.9
C5	C6	C1	H1	179.9	180.3
C1	C6	C5	H6	180.0	180.0
C6	C5	C4	C8	180.1	180.1
C4	C5	C6	H5	180.0	180.0
N1	C11	C9	C8	178.8	180.0
O1	C8	C9	C4	176.6	180.0
C8	C9	S1	C10	181.1	180.0
S1	C9	C8	C11	179.4	180.0
N3	C11	C9	C8	359.6	0.0
N1	C11	C9	N3	179.3	180.0
C11	C9	S1	C10	0.5	0.0
S1	C9	C11	C8	180.6	180.0
C9	C11	N3	HN3	179.2	180.0
C9	C11	N3	HN3A	299.2	360.0
N2	C12	C13	C17	179.9	179.7
C13	C12	N2	HN2	153.5	328.1
C13	C12	C17	C16	0.0	359.4
C13	C12	C17	H17	180.0	179.7
C12	C13	C14	C15	0.0	360.0
C14	C13	C12	H13	180.0	180.1
C12	C13	C14	H14	180.0	180.0
N2	C12	C17	C13	180.1	180.3
C17	C12	N2	HN2	333.4	147.8
C17	C12	C13	C14	359.9	0.3
C17	C12	C13	H13	179.9	180.2
C15	C16	C17	C12	0.1	0.5
C12	C17	C16	H16	180.1	180.3
C16	C17	C12	H17	180.0	179.8
C14	C13	C12	C17	359.9	0.3
C12	C13	C14	H13	180.0	179.9
C13	C14	C15	C16	0.1	360.0
C15	C14	C13	H14	180.0	180.0
C13	C14	C15	H15	180.1	180.0
C15	C14	C13	H13	180.0	180.0
C13	C14	C15	H14	180.0	180.0
C14	C15	C16	C17	359.8	359.8
C16	C15	C14	H15	180.0	180.0
C14	C15	C16	H16	179.8	180.0
C12	C17	C16	C15	0.1	0.5
C16	C15	C14	H14	180.1	180.0
C14	C15	C16	H15	180.0	180.0
C17	C16	C15	H16	180.0	179.8
C15	C16	C17	H17	180.1	180.3
C12	C17	C16	H17	180.0	180.2
C17	C16	C15	H15	179.8	179.8
C15	C16	C17	H16	180.0	180.2
C2	C1	H1	C6	180.0	180.3
H1	C1	C2	C3	180.0	179.7
H1	C1	C2	C7	0.1	359.7
H1	C1	C6	C5	179.9	180.3
H1	C1	C6	H6	359.9	0.3
C10	N2	HN2	C12	180.0	180.0
HN2	N2	C12	C13	153.5	328.1
HN2	N2	C12	C17	333.4	147.8
H3	C3	C2	C7	360.0	360.0
C2	C3	H3	C4	180.0	180.0
H3	C3	C4	C5	179.8	180.0
H3	C3	C4	C8	359.9	359.9
HN3	N3	C11	C9	179.2	180.0
C11	N3	HN3	HN3A	120.0	180.0
HN3A	N3	C11	C9	299.2	360.0
C11	N3	HN3A	HN3	240.0	180.0
H5	C5	C4	C8	0.1	0.1
C4	C5	H5	C6	180.0	180.0
H5	C5	C6	H6	360.0	360.0
C1	C6	H6	C5	180.0	180.0
H6	C6	C1	H1	359.9	0.3
H6	C6	C5	H5	360.0	360.0
H13	C13	C12	C17	179.9	180.2
C12	C13	H13	C14	180.0	180.1
H13	C13	C14	C15	180.0	180.0
H13	C13	C14	H14	0.0	0.0
C13	C14	H14	C15	180.0	180.0
H14	C14	C13	H13	0.0	0.0
H14	C14	C15	C16	180.1	180.0
H14	C14	C15	H15	0.1	0.0
C14	C15	H15	C16	180.0	180.0
H15	C15	C14	H14	0.1	0.0
H15	C15	C16	C17	179.8	179.8
H15	C15	C16	H16	359.8	360.0
C15	C16	H16	C17	180.0	179.8
H16	C16	C15	H15	359.8	360.0
H16	C16	C17	H17	0.1	0.1
C12	C17	H17	C16	180.0	179.8
H17	C17	C16	H16	0.1	0.1